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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917161
Clone id YMU001_000097_A11
Library
Length 438
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCAACGTTGCTTGCAAAAAGCCAAAGTAAGAGCTGATCAATACAATCATGGCATAAAGCC
ATACAGTCATGGCACATGCTTAAGAAAATGTCTACAACATACAACGAAAAAACCAGTAAA
ATTTAGGGGTTTACACCCCCTAATGAGTGCACACAGTGCCCTGGCAACTGCTAAAGAAGT
AAAAGGAGGAGAAGATGGTAAAAAACAAGGCTCAATAAGCATGTGATTCAAAACTTCCTT
TAAGTTAACAAGATGCACATGGTTTTCACAGTAGTAAGTATTGTGGTCCTTGAACTTGCG
CACAAAGTATGGCATTAGACCCTCAAAGCATCTAAGGAGATCCTTATATTAGAATGAGCC
TCCTAGAACCACGTATAGAAGTCTCCATGTGATACACAAGACACATTTAAAATTGATAAG
ACCTAGTGTGCTAGGTTA
■■Homology search results ■■ -
sp_hit_id A6NN14
Definition sp|A6NN14|YS032_HUMAN Zinc finger protein ENSP00000350085 OS=Homo sapiens
Align length 66
Score (bit) 32.0
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917161|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_A11.
         (438 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6NN14|YS032_HUMAN Zinc finger protein ENSP00000350085 OS=Hom...    32   1.2  
sp|Q8EL21|UXUA_OCEIH Mannonate dehydratase OS=Oceanobacillus ihe...    30   3.4  
sp|A7H097|ARGC_CAMC5 N-acetyl-gamma-glutamyl-phosphate reductase...    30   5.7  
sp|Q8P3E3|PLSB_XANCP Glycerol-3-phosphate acyltransferase OS=Xan...    30   5.7  
sp|Q8PES0|PLSB_XANAC Glycerol-3-phosphate acyltransferase OS=Xan...    30   5.7  
sp|Q8HY87|RNZ2_MACFA Zinc phosphodiesterase ELAC protein 2 OS=Ma...    29   7.5  
sp|Q68DY1|ZN626_HUMAN Zinc finger protein 626 OS=Homo sapiens GN...    29   7.5  
sp|Q87EJ1|PLSB_XYLFT Glycerol-3-phosphate acyltransferase OS=Xyl...    29   7.5  
sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus ...    29   7.5  
sp|Q5EBM4|ZN542_HUMAN Zinc finger protein 542 OS=Homo sapiens GN...    29   9.8  

>sp|A6NN14|YS032_HUMAN Zinc finger protein ENSP00000350085 OS=Homo
           sapiens PE=2 SV=3
          Length = 1173

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +2

Query: 56  KPYSHGTCLRKC-LQHTTKKPVKFRGLHPLMSAHSALATAKEVKGGEDGKKQGSISM*FK 232
           K +SH + LR+  + HT KKP K        S  SAL   K +  GE   K       FK
Sbjct: 663 KAFSHFSALRRHKIIHTGKKPYKCEECGKAFSHFSALRRHKIIHTGEKPYKCEECGKAFK 722

Query: 233 TSFKLT 250
            S KLT
Sbjct: 723 WSSKLT 728


>sp|Q8EL21|UXUA_OCEIH Mannonate dehydratase OS=Oceanobacillus
           iheyensis GN=uxuA PE=3 SV=1
          Length = 349

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = -1

Query: 324 EGLMPYFVRKFKDHNTYYCENHVHLVNLKEVLNHMLIEPCFLPSSPPFTSLAVARALCAL 145
           E  +P  +++F DH  +     VH+ N+K + NH  +E   L         AV RAL   
Sbjct: 245 ENDLPEIIKEFGDHIHF-----VHMRNIKRLDNHSFVESGHLSKYGSVDMKAVVRAL--- 296

Query: 144 IRGCKPLNFTG 112
               K +N+ G
Sbjct: 297 ----KDINYKG 303


>sp|A7H097|ARGC_CAMC5 N-acetyl-gamma-glutamyl-phosphate reductase
           OS=Campylobacter curvus (strain 525.92) GN=argC PE=3
           SV=1
          Length = 336

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = -1

Query: 309 YFVRKFKDHNTYYCENHVHLVNLKEVLNHML---IEPCFLPSSPPFTSLAVARALCALIR 139
           +FV   ++ N Y   NH H   +K  L++     I   F+P   P T   +  A   L++
Sbjct: 190 HFVSVNENANAYNPINHRHADEIKFHLSNAAGSDISTLFVPHLLPITRGMLVSAYARLVK 249

Query: 138 GCKPLNFTGFF 106
             KPL   G F
Sbjct: 250 DIKPLEVLGEF 260


>sp|Q8P3E3|PLSB_XANCP Glycerol-3-phosphate acyltransferase
           OS=Xanthomonas campestris pv. campestris GN=plsB PE=3
           SV=1
          Length = 886

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 320 PSKHLRRSLY*NEPPRTTYRSLHVIHKTHLKLIRPSVLG 436
           P   LR+++    PP  T R L  + +TH + IR +V+G
Sbjct: 226 PPISLRQTMAEGLPPERTLRKLQRVLRTHFRRIREAVIG 264


>sp|Q8PES0|PLSB_XANAC Glycerol-3-phosphate acyltransferase
           OS=Xanthomonas axonopodis pv. citri GN=plsB PE=3 SV=1
          Length = 885

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 320 PSKHLRRSLY*NEPPRTTYRSLHVIHKTHLKLIRPSVLG 436
           P   LR+++    PP  T R L  + +TH + IR +V+G
Sbjct: 226 PPISLRQTMAEGLPPERTLRKLQRVLRTHFRRIREAVIG 264


>sp|Q8HY87|RNZ2_MACFA Zinc phosphodiesterase ELAC protein 2
           OS=Macaca fascicularis GN=ELAC2 PE=2 SV=1
          Length = 826

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 240 KEVLNHMLIEPC-FLPSSPPFTSLAVARALCALIRGCKPLNFTGFFVVCCRH 88
           +EVL+H+ + P  +L      +S AV R + +L+R C    F    V  CRH
Sbjct: 596 QEVLHHVSMIPAKYLQVGAEISSPAVERLISSLLRTCDLEEFQTCLVRHCRH 647


>sp|Q68DY1|ZN626_HUMAN Zinc finger protein 626 OS=Homo sapiens
           GN=ZNF626 PE=2 SV=2
          Length = 528

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
 Frame = +2

Query: 44  NH-GIKPYSHGTCLRKCLQ----------HTTKKPVKFRGLHPLMSAHSALATAKEVKGG 190
           NH G KPY    C +  +           HT KKP K        +  S L T K +  G
Sbjct: 250 NHTGEKPYKCDKCGKAFMSSSTLSKHEIIHTEKKPYKCEECGKAFNRSSTLTTHKIIHTG 309

Query: 191 EDGKKQGSISM*FKTSFKLT 250
           E   K       FK S+ LT
Sbjct: 310 EKPYKCEECDKAFKYSYTLT 329


>sp|Q87EJ1|PLSB_XYLFT Glycerol-3-phosphate acyltransferase
           OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964)
           GN=plsB PE=3 SV=1
          Length = 863

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 320 PSKHLRRSLY*NEPPRTTYRSLHVIHKTHLKLIRPSVLG 436
           P   +R++L    PP  T R L  + +TH + IR +V+G
Sbjct: 208 PPISVRQTLNEGLPPERTLRKLQRVLRTHFRRIRETVIG 246


>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus
            norvegicus GN=Vcan PE=2 SV=2
          Length = 2738

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 356  EPPRTTYRSLHVIHKTHLKLIRPSVL 433
            EP R T+ SL + H+TH  L   S+L
Sbjct: 2343 EPERPTFPSLEINHETHTSLFEESIL 2368


>sp|Q5EBM4|ZN542_HUMAN Zinc finger protein 542 OS=Homo sapiens
           GN=ZNF542 PE=2 SV=1
          Length = 241

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
 Frame = +2

Query: 50  GIKPY----------SHGTCLRKCLQHTTKKPVKFRGLHPLMSAHSALATAKEVKGGE 193
           G KPY          +H + +     H+ +KP K +      SAHS+L T K    GE
Sbjct: 125 GEKPYECKECGKSFSAHSSLVTHKRTHSGEKPYKCKECGKAFSAHSSLVTHKRTHSGE 182
tr_hit_id B1BQ64
Definition tr|B1BQ64|B1BQ64_CLOPE FliB family protein OS=Clostridium perfringens E str. JGS1987
Align length 40
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917161|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_A11.
         (438 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1BQ64|B1BQ64_CLOPE FliB family protein OS=Clostridium perfri...    35   1.4  
tr|B1RAP3|B1RAP3_CLOPE FliB domain protein OS=Clostridium perfri...    34   3.2  
tr|Q7QKS9|Q7QKS9_ANOGA AGAP012696-PA OS=Anopheles gambiae str. P...    34   4.1  

>tr|B1BQ64|B1BQ64_CLOPE FliB family protein OS=Clostridium
           perfringens E str. JGS1987 GN=AC3_1114 PE=4 SV=1
          Length = 385

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -1

Query: 336 LRCFEGLMPYFVRKFKDHNTYYCENHVHLVNLKEVLNHML 217
           L+CFEG   +F+RK K+ N YY EN   L   K +L + +
Sbjct: 258 LKCFEGNEEFFLRKHKEFNEYYKEN---LYKFKNILVYFI 294


>tr|B1RAP3|B1RAP3_CLOPE FliB domain protein OS=Clostridium
           perfringens B str. ATCC 3626 GN=AC1_1143 PE=4 SV=1
          Length = 456

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 336 LRCFEGLMPYFVRKFKDHNTYYCENHVHLVNLKEVLNHML 217
           L+CFEG   +++RK K+ N YY EN   L   K +L + +
Sbjct: 329 LKCFEGNEEFYLRKHKEFNEYYKEN---LYKFKNILVYFI 365


>tr|Q7QKS9|Q7QKS9_ANOGA AGAP012696-PA OS=Anopheles gambiae str. PEST
           GN=AgaP_AGAP012696 PE=4 SV=4
          Length = 334

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 336 LRCFEGLMPYFVRKFKDHNTYYCENHVHLVNLKEVLNHMLIEPCF 202
           L C+ G +  FVR   +   YY   H HL+   E+    ++  CF
Sbjct: 179 LHCYRGSLDQFVRSMMNELVYYSPYHKHLIEYSELRYPNMLSLCF 223