BP917162 |
Clone id |
YMU001_000097_A12 |
Library |
YMU01 |
Length |
487 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000097_A12. |
Accession |
BP917162 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGGAGACACCCATTTTGAGTGCTTAATAGTGTATATGAATCCACATTTGAAAAGCTTTTC AATCTCTTCTTGAACAATCTTTGCATACTTAGGATTCATTGGGTAGGGTCATTGCTAGAC TGGTTTAGCCATGCTATTCATGGGAATTGTGTGTTGCACCACAGAAGGTGGAACACCTTT TATATCATGATATGTCCAAGCAAATATATCCTTGAATTCCTTGAGAAGTTTGTAAAGTAC ATACTCCTCAGTCTCTGTCAGATCTTGGGCAATGAAAACAGGTTTTGACTCTTCTCCTGA GTCTGCTAACTCTATCTCTTTAACTATCTCTAGACCATCATAGACTCCATTGCTTCCATC AATAGGTTTTCTTTGAGCCTTTGTATGCACAACCTTACGTTCCTCTGTGGTGTAGGATTG GAAATGATCAGGTACAGGGTGTAAGTCTGTGGGGTCTTGGGGTTCTATGGGCTATGATTT CTCTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2Y6I6 |
Definition |
sp|Q2Y6I6|CH60_NITMU 60 kDa chaperonin OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) |
Align length |
124 |
Score (bit) |
30.8 |
E-value |
3.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5C2K5 |
Definition |
tr|A5C2K5|A5C2K5_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
134 |
Score (bit) |
85.9 |
E-value |
9.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917162|Adiantum capillus-veneris mRNA, clone: YMU001_000097_A12. (487 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5C2K5|A5C2K5_VITVI Putative uncharacterized protein OS=Vitis... 86 9e-16 tr|Q6ATH7|Q6ATH7_ORYSJ Putative polyprotein OS=Oryza sativa subs... 83 8e-15 tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis... 83 8e-15 tr|A5AZE5|A5AZE5_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|A5ALU1|A5ALU1_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|Q01MY6|Q01MY6_ORYSA OSIGBa0160I04.5 protein OS=Oryza sativa G... 81 2e-14 tr|A5BNA6|A5BNA6_VITVI Putative uncharacterized protein OS=Vitis... 81 2e-14 tr|Q7XME9|Q7XME9_ORYSJ OSJNBa0061G20.10 protein OS=Oryza sativa ... 81 3e-14 tr|Q01KN2|Q01KN2_ORYSA OSIGBa0097A15.4 protein OS=Oryza sativa G... 81 3e-14 tr|A5BSJ3|A5BSJ3_VITVI Putative uncharacterized protein OS=Vitis... 81 3e-14 tr|Q7X749|Q7X749_ORYSJ OSJNBa0016N04.1 protein OS=Oryza sativa s... 80 4e-14 tr|Q53NA3|Q53NA3_ORYSJ Retrotransposon protein, putative, unclas... 80 4e-14 tr|Q2AA19|Q2AA19_ASPOF RNase H family protein OS=Asparagus offic... 80 4e-14 tr|Q01KR6|Q01KR6_ORYSA OSIGBa0092J07.1 protein (OSIGBa0146I21.6 ... 80 4e-14 tr|A5CAG9|A5CAG9_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|A5BYG4|A5BYG4_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|A5BHA9|A5BHA9_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|A5B120|A5B120_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|A5AZ81|A5AZ81_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|Q2QSI5|Q2QSI5_ORYSJ Retrotransposon protein, putative, unclas... 80 5e-14 tr|A5C4H4|A5C4H4_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5BSV0|A5BSV0_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5BRI1|A5BRI1_VITVI Putative uncharacterized protein (Fragmen... 80 5e-14 tr|A5BFP7|A5BFP7_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5BDN9|A5BDN9_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5B6Y5|A5B6Y5_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5AY22|A5AY22_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|Q8S600|Q8S600_ORYSJ Putative retrotransposon OS=Oryza sativa ... 80 7e-14 tr|Q7XSL0|Q7XSL0_ORYSJ OSJNBa0059D20.1 protein (OSJNBb0013J13.19... 80 7e-14
>tr|A5C2K5|A5C2K5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032076 PE=4 SV=1 Length = 1239
Score = 85.9 bits (211), Expect = 9e-16 Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 9/134 (6%) Frame = -2
Query: 378 AQRKPIDGSNGVYDGLEI-------VKEIELADSGEESKP--VFIAQDLTETEEYVLYKL 226 AQR DGS+ V D + V++ E+ D G +P + I DL E L +L Sbjct: 864 AQRDSDDGSSSVSDSDPVDQRVSLAVRDTEIVDLGTADQPRELKIGSDLFVDERDNLIQL 923
Query: 225 LKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFK 46 L+ + D+FAW+Y D+ G+ PS+VQH +P A+PV Q ++P+++ V+EEI+KL Sbjct: 924 LRAYLDVFAWSYEDMSGLDPSIVQHRLPFLPHARPVKQKLRRLHPRWSLQVKEEIQKLLS 983
Query: 45 CGFIYTIKHSKWVS 4 GF+ +++ +W++ Sbjct: 984 VGFLSMVEYPEWLA 997
>tr|Q6ATH7|Q6ATH7_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0093E24.4 PE=4 SV=1 Length = 1941
Score = 82.8 bits (203), Expect = 8e-15 Identities = 38/107 (35%), Positives = 67/107 (62%) Frame = -2
Query: 324 VKEIELADSGEESKPVFIAQDLTETEEYVLYKLLKEFKDIFAWTYHDIKGVPPSVVQHTI 145 ++E+++ D G + +P F+ +++ + + +LLKE+ D FAW YH+I G+ +V+H Sbjct: 1066 LEEVDIGD-GTKPRPTFVNKNMRADYKVKIIELLKEYADCFAWEYHEIPGLSRELVEHRF 1124
Query: 144 PMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFKCGFIYTIKHSKWVS 4 P+ S +P Q P+ NP V+EEI++L K GFI ++++WVS Sbjct: 1125 PIKSGFRPYKQPPHRFNPLLYDRVKEEIDRLLKAGFIRPCRYAEWVS 1171
>tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034374 PE=4 SV=1 Length = 1030
Score = 82.8 bits (203), Expect = 8e-15 Identities = 39/109 (35%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Frame = -2
Query: 324 VKEIELADSG--EESKPVFIAQDLTETEEYVLYKLLKEFKDIFAWTYHDIKGVPPSVVQH 151 V + E+ D G ++S+ + I DL+ E L +LL+ + D+FAW+Y D+ G+ PS+VQH Sbjct: 250 VGDTEIVDFGTADQSRELRIGSDLSTDERDGLIQLLRSYLDVFAWSYEDMPGLDPSIVQH 309
Query: 150 TIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFKCGFIYTIKHSKWVS 4 +P+ A+PV Q ++P+++ V+EEI+K GF+ +K+ +W++ Sbjct: 310 RLPLLPQARPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLSVVKYPEWLA 358
>tr|A5AZE5|A5AZE5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012970 PE=4 SV=1 Length = 1710
Score = 82.0 bits (201), Expect = 1e-14 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 9/134 (6%) Frame = -2
Query: 378 AQRKPIDGSNGVYDG-------LEIVKEIELADSGEESKP--VFIAQDLTETEEYVLYKL 226 AQ DGS+ D +V + E+ D G +P + I DL+ E L +L Sbjct: 888 AQHDSDDGSSSASDSGPVDERVSPVVGDTEIVDFGIADQPRELRIGSDLSVDERDSLIQL 947
Query: 225 LKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFK 46 L+ + D+FAW+Y D+ G+ PS+VQH +P+ AKPV Q ++P+++ V+EEI+K Sbjct: 948 LRAYLDVFAWSYEDMPGLDPSIVQHCLPLLPHAKPVKQKLRRLHPRWSLQVKEEIQKQLS 1007
Query: 45 CGFIYTIKHSKWVS 4 GF+ +++ +W++ Sbjct: 1008 VGFLSVVEYPEWLA 1021
>tr|A5ALU1|A5ALU1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001308 PE=4 SV=1 Length = 1901
Score = 82.0 bits (201), Expect = 1e-14 Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 4/135 (2%) Frame = -2
Query: 396 KVVHTKAQRKPIDGSNGVYDGL--EIVKEIELADSGEESKP--VFIAQDLTETEEYVLYK 229 ++ H + R D +G D +IE D G E KP + I L+ E L Sbjct: 1085 EIAHPSSDRDSFDHDSGPIDERVSPTAGDIETVDFGTEDKPRELKIGSPLSTDERDRLIH 1144
Query: 228 LLKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLF 49 LL+ + D+FAW+Y D+ G+ PS+VQH +P A+PV Q ++P+++ V+EEI+K Sbjct: 1145 LLRSYLDVFAWSYEDMPGLDPSIVQHHLPTLPHARPVKQKLRRLHPRWSLQVKEEIQKQL 1204
Query: 48 KCGFIYTIKHSKWVS 4 GFI +++ +W++ Sbjct: 1205 SVGFISVVEYPEWLA 1219
>tr|Q01MY6|Q01MY6_ORYSA OSIGBa0160I04.5 protein OS=Oryza sativa GN=OSIGBa0160I04.5 PE=4 SV=1 Length = 1221
Score = 81.3 bits (199), Expect = 2e-14 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 2/131 (1%) Frame = -2
Query: 390 VHTKAQRKPIDGSNGVYDGLEIVKEIELAD--SGEESKPVFIAQDLTETEEYVLYKLLKE 217 V+TK +D G G + ++E D G+ S+P FI+++LT L +LLKE Sbjct: 594 VYTKDTVDDLDDKQG--QGFMLADDLEEIDIGPGDRSRPTFISKNLTPEFRTKLIELLKE 651
Query: 216 FKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFKCGF 37 F+D FAW Y+++ G S+V+H +P+ KP Q P + V+ EI++L+ GF Sbjct: 652 FRDSFAWEYYEMPGFSQSIVEHRLPIKPGVKPHQQPPRRCKADMLQPVKAEIKRLYDAGF 711
Query: 36 IYTIKHSKWVS 4 I ++++WVS Sbjct: 712 IRPCRYAEWVS 722
>tr|A5BNA6|A5BNA6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024592 PE=4 SV=1 Length = 1417
Score = 81.3 bits (199), Expect = 2e-14 Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 9/134 (6%) Frame = -2
Query: 378 AQRKPIDGSNGVYDG-------LEIVKEIELADSGEESKP--VFIAQDLTETEEYVLYKL 226 AQR D S V D +V + E+ D G +P + I DL+ E L L Sbjct: 375 AQRDSDDDSFSVSDSDPVDQKVSPVVGDTEIVDFGTTDQPRELRIGSDLSSDERDSLIHL 434
Query: 225 LKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFK 46 L+ + D+FAW+Y D+ G+ PS+VQH +P+ A+PV Q ++P+++ V+EEI+K Sbjct: 435 LRSYLDVFAWSYEDMPGLDPSIVQHLLPLLPHARPVKQKLRRLHPRWSLQVKEEIQKQLS 494
Query: 45 CGFIYTIKHSKWVS 4 GF+ +++ +W++ Sbjct: 495 VGFLSVVEYPEWLA 508
>tr|Q7XME9|Q7XME9_ORYSJ OSJNBa0061G20.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0061G20.10 PE=4 SV=2 Length = 1472
Score = 80.9 bits (198), Expect = 3e-14 Identities = 40/139 (28%), Positives = 76/139 (54%) Frame = -2
Query: 420 QSYTTEERKVVHTKAQRKPIDGSNGVYDGLEIVKEIELADSGEESKPVFIAQDLTETEEY 241 Q Y + + + T ++ + + ++E+++ D G + +P F+ +++ + Sbjct: 481 QEYRSTKNDIGETVEDFDEVEKLGKGFTSADPLEEVDIGD-GTKPRPTFVNKNMRADYKV 539
Query: 240 VLYKLLKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEI 61 + +LLKE+ D FAW YH++ G+ +V+H +P+N P Q P NP V+EEI Sbjct: 540 NIIELLKEYVDCFAWEYHEMPGLSRELVEHRLPINPGFSPYKQPPRRFNPLLYDRVKEEI 599
Query: 60 EKLFKCGFIYTIKHSKWVS 4 ++L K GFI ++++WVS Sbjct: 600 DRLLKVGFIRPCRYAEWVS 618
>tr|Q01KN2|Q01KN2_ORYSA OSIGBa0097A15.4 protein OS=Oryza sativa GN=OSIGBa0097A15.4 PE=4 SV=1 Length = 926
Score = 80.9 bits (198), Expect = 3e-14 Identities = 40/139 (28%), Positives = 76/139 (54%) Frame = -2
Query: 420 QSYTTEERKVVHTKAQRKPIDGSNGVYDGLEIVKEIELADSGEESKPVFIAQDLTETEEY 241 Q Y + + + T ++ + + ++E+++ D G + +P F+ +++ + Sbjct: 549 QEYRSTKNDIGETVEDFDEVEKLGKGFTSADPLEEVDIGD-GTKPRPTFVNKNMRADYKV 607
Query: 240 VLYKLLKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEI 61 + +LLKE+ D FAW YH++ G+ +V+H +P+N P Q P NP V+EEI Sbjct: 608 NIIELLKEYVDCFAWEYHEMPGLSRELVEHRLPINPGFSPYKQPPRRFNPLLYDRVKEEI 667
Query: 60 EKLFKCGFIYTIKHSKWVS 4 ++L K GFI ++++WVS Sbjct: 668 DRLLKVGFIRPCRYAEWVS 686
>tr|A5BSJ3|A5BSJ3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008285 PE=4 SV=1 Length = 2237
Score = 80.9 bits (198), Expect = 3e-14 Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 9/134 (6%) Frame = -2
Query: 378 AQRKPIDGSNGVYDGLEI-------VKEIELADSGEESKP--VFIAQDLTETEEYVLYKL 226 AQ D S+ +D + V + E+ D G +P + I DL+ E L +L Sbjct: 1144 AQHDSDDDSSPTFDSDPVDQRVSPAVGDTEIVDFGTADQPRELRIGSDLSTDERDSLIQL 1203
Query: 225 LKEFKDIFAWTYHDIKGVPPSVVQHTIPMNSMAKPV*Q*PYPMNPKYAKIVQEEIEKLFK 46 L+ + D+FAW+Y D+ G+ PS+VQH +P+ A+PV Q ++P+++ V+EEI+K Sbjct: 1204 LRSYSDVFAWSYEDMPGLDPSIVQHRLPLLPHARPVKQKLRRLHPRWSLQVKEEIQKQLS 1263
Query: 45 CGFIYTIKHSKWVS 4 GF+ +++ +W++ Sbjct: 1264 VGFLSVVEYPEWLA 1277
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