BP917172
Clone id YMU001_000097_B10
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGTTGACAAAAACAATAGCTTTATGCGAGTGTGATGTGTCCAGATAAAAACAAAGGGCGG
ATGACATTCGATTGTACAAACCCTCAGATATTACACAAAAACACAATCATCATCGACACC
TGCCGGTAGCAAAGGAGAGAGGTCCCTTGGATAAGCATGAGATAGAGGGCTCCTGATGTA
CATGAATCTGATTGCGACGAGCACGAATATTAGAAACCACGGAACTCTTACAAAATTTGT
CCCCCTCTACCAAATGTGCGCAAACAAACTTGCACAGAAAAAATTGATGTGCGTTGCATT
GGCTCCTTTTGGGCTTGCTTTTCCTCTTTAAATTACACAAGATGTCCCTTTTTGTGCCAG
TTTATGAGAGAGCATTCTCAACAATTTCTTACCCATGAGTGGGCTTGCACTCTCTGAGAC
CTGCCCTTCCCCACAGCATTCTAAATGGCATGTTCGGTGAACTACTCCATCAGATCATCC
TCAGTTCATATTCCCCAGCTGTTGTAATATATCGTACCCA
■■Homology search results ■■ -
sp_hit_id Q8L9G7
Definition sp|Q8L9G7|APH1_ARATH Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana
Align length 50
Score (bit) 30.8
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917172|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_B10.
(520 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8L9G7|APH1_ARATH Gamma-secretase subunit APH1-like OS=Arabid... 31 4.0
sp|P35602|AP1M_CAEEL AP-1 complex subunit mu-1-I OS=Caenorhabdit... 31 4.0
sp|Q03149|WA_EMENI Conidial yellow pigment biosynthesis polyketi... 30 9.0

>sp|Q8L9G7|APH1_ARATH Gamma-secretase subunit APH1-like
OS=Arabidopsis thaliana GN=At2g31440 PE=2 SV=2
Length = 250

Score = 30.8 bits (68), Expect = 4.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -2

Query: 306 GANATHINFFCASLFAHIW*RGTNFV----RVPWFLIFVLVAIRFMYIRS 169
G H FFC SL + T +V +VP+FLI ++A+ F+ I +
Sbjct: 123 GHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHT 172


>sp|P35602|AP1M_CAEEL AP-1 complex subunit mu-1-I OS=Caenorhabditis
elegans GN=unc-101 PE=2 SV=2
Length = 422

Score = 30.8 bits (68), Expect = 4.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1

Query: 520 WVRYITTAGEYELRM 476
WVRYIT GEYE+RM
Sbjct: 407 WVRYITQNGEYEMRM 421


>sp|Q03149|WA_EMENI Conidial yellow pigment biosynthesis polyketide
synthase OS=Emericella nidulans GN=wA PE=1 SV=2
Length = 2157

Score = 29.6 bits (65), Expect = 9.0
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2

Query: 447 HLECCGEGQVSESASPLM-GKKLLRMLSHKLAQKGTSCV 334
HL+C +GQ S PL+ G L LS + Q GT+CV
Sbjct: 941 HLDCISQGQDLPSILPLVDGSLPLSELSPVVVQLGTTCV 979


tr_hit_id A7QM56
Definition tr|A7QM56|A7QM56_VITVI Chromosome chr5 scaffold_124, whole genome shotgun sequence OS=Vitis vinifera
Align length 50
Score (bit) 36.2
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917172|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_B10.
(520 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QM56|A7QM56_VITVI Chromosome chr5 scaffold_124, whole genom... 36 1.00
tr|B8LRZ0|B8LRZ0_PICSI Putative uncharacterized protein OS=Picea... 35 1.7
tr|A9TUU6|A9TUU6_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.9
tr|A9TRS4|A9TRS4_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.9
tr|Q65XN2|Q65XN2_ORYSJ Os05g0543100 protein OS=Oryza sativa subs... 34 3.8
tr|Q0JK13|Q0JK13_ORYSJ Os01g0703600 protein (Putative uncharacte... 34 3.8
tr|B8AW82|B8AW82_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.8
tr|B4FQ20|B4FQ20_MAIZE Putative uncharacterized protein OS=Zea m... 34 3.8
tr|A7QY06|A7QY06_VITVI Chromosome undetermined scaffold_235, who... 34 3.8
tr|A3B6E5|A3B6E5_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.8
tr|A2WU74|A2WU74_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.8
tr|A1DF38|A1DF38_NEOFI AP-2 adaptor complex subunit mu, putative... 34 3.8
tr|O22715|O22715_ARATH Putative Clathrin Coat Assembly protein (... 34 5.0
tr|A8HXA2|A8HXA2_CHLRE Mu1-Adaptin OS=Chlamydomonas reinhardtii ... 34 5.0
tr|A4QIR8|A4QIR8_LETOB ATP synthase protein 8 OS=Lethrinus obsol... 33 8.5
tr|Q9SGX7|Q9SGX7_ARATH F20B24.16 OS=Arabidopsis thaliana PE=4 SV=1 33 8.5
tr|Q9SAC9|Q9SAC9_ARATH T16B5.13 protein OS=Arabidopsis thaliana ... 33 8.5

>tr|A7QM56|A7QM56_VITVI Chromosome chr5 scaffold_124, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001929001
PE=4 SV=1
Length = 249

Score = 36.2 bits (82), Expect = 1.00
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2

Query: 306 GANATHINFFCASLFAHIW*RGTNFV----RVPWFLIFVLVAIRFMYIRS 169
G H FFC SL + R T FV R+P+FLI L+A+ F+ I +
Sbjct: 123 GHGGAHAVFFCLSLLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHT 172


>tr|B8LRZ0|B8LRZ0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 428

Score = 35.4 bits (80), Expect = 1.7
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELRMI
Sbjct: 413 WVRYITMAGEYELRMI 428


>tr|A9TUU6|A9TUU6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_172080 PE=4 SV=1
Length = 427

Score = 34.7 bits (78), Expect = 2.9
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 520 WVRYITTAGEYELRM 476
WVRYITTAGEYELR+
Sbjct: 413 WVRYITTAGEYELRI 427


>tr|A9TRS4|A9TRS4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108647 PE=4 SV=1
Length = 427

Score = 34.7 bits (78), Expect = 2.9
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 520 WVRYITTAGEYELRM 476
WVRYITTAGEYELR+
Sbjct: 413 WVRYITTAGEYELRI 427


>tr|Q65XN2|Q65XN2_ORYSJ Os05g0543100 protein OS=Oryza sativa subsp.
japonica GN=OJ1288_A07.7 PE=2 SV=1
Length = 430

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELR+I
Sbjct: 415 WVRYITMAGEYELRLI 430


>tr|Q0JK13|Q0JK13_ORYSJ Os01g0703600 protein (Putative
uncharacterized protein) OS=Oryza sativa subsp. japonica
GN=Os01g0703600 PE=4 SV=1
Length = 429

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELR+I
Sbjct: 414 WVRYITMAGEYELRLI 429


>tr|B8AW82|B8AW82_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20841 PE=4 SV=1
Length = 430

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELR+I
Sbjct: 415 WVRYITMAGEYELRLI 430


>tr|B4FQ20|B4FQ20_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 429

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELR+I
Sbjct: 414 WVRYITMAGEYELRLI 429


>tr|A7QY06|A7QY06_VITVI Chromosome undetermined scaffold_235, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00009485001 PE=4 SV=1
Length = 428

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELR+I
Sbjct: 413 WVRYITMAGEYELRLI 428


>tr|A3B6E5|A3B6E5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_018617 PE=4 SV=1
Length = 404

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1

Query: 520 WVRYITTAGEYELRMI 473
WVRYIT AGEYELR+I
Sbjct: 389 WVRYITMAGEYELRLI 404