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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917175
Clone id YMU001_000097_C03
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TATATATAATGTACATTTGATTGGTAACAAAAACTTAGTTTACAAATAAAATGGAAGGCC
AACATTTTAGCCTCTTTCCGGCCCTGCAAACCACAGATAGTAATCACCTTGGGGAGAGTG
AAAGAGAAGTTCACTGACAACAAGGTCTTTGTAGTTGAGGGTAAAACCAAGAAATTTTTT
GACAATGCTATCAACGATACTCCCGTAGCAAATACATGGATGGACTTTCAAAGCTTTGTC
TCTGATGAACACTGCGAGCTGGCGTCATTTGAGATGGGATGTTCCACGATGACATATCTA
CCAGTATGCATCCGGGAGAGACTGAAAACCAATCATTTCCATGATCCCCAGCTGATAGAA
TGTTCTCTTTCCCTTCATCTAGGACAGCAGCCATTGATTGTGACAATCTTTGTTCAGTGC
TCAGACTGGACAAAATCTCTTCAGCCTCCATATAAGCACTCGCAGCCTGTCTGCTCAAAC
ATTGCATGACTCCCAAAGCATCTTCAGCTCTATACGCAAGAAAACCTCTCTCCTCTTCGA
■■Homology search results ■■ -
sp_hit_id P32359
Definition sp|P32359|TREA_TENMO Trehalase OS=Tenebrio molitor
Align length 64
Score (bit) 30.8
E-value 4.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917175|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_C03.
         (540 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32359|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1           31   4.5  
sp|A1L1L3|PTN20_RAT Tyrosine-protein phosphatase non-receptor ty...    30   5.8  
sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic sub...    30   9.9  

>sp|P32359|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1
          Length = 555

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = +1

Query: 100 VITLGRVKEKFTDNKVFVV------EGKTKKFFDNAINDTPVANTWMDFQSFVSDEHCEL 261
           V+ + R+   F D+K FV       E  T + FDN + DT    T  D   FVSD   + 
Sbjct: 38  VVEMSRI---FNDSKTFVELKMINDEQTTLENFDNFLRDTNHKRTRADLMKFVSDNFKQE 94

Query: 262 ASFE 273
             FE
Sbjct: 95  NEFE 98


>sp|A1L1L3|PTN20_RAT Tyrosine-protein phosphatase non-receptor type
           20 OS=Rattus norvegicus GN=Ptpn20 PE=2 SV=1
          Length = 421

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
 Frame = +1

Query: 103 ITLGRVKEKFTDNKVFVVEGKTKKFFDNAINDTPVANTWMDFQSFVSDEHCELASF---- 270
           + LG+ K+    + + +V  + + F+       P+ +T  DF   V + +C + +     
Sbjct: 201 VPLGKNKDYINASYIRIVNHEEEYFY--IATQGPLPDTIEDFWQMVLENNCNVIAMITRE 258

Query: 271 -EMGC-STMTYLPVCIRERLKTNHFH 342
            E G     +Y PV ++E L+  HFH
Sbjct: 259 IEGGVIKCCSYWPVSLKEPLEFKHFH 284


>sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic
           subunit 1 OS=Thermosynechococcus elongatus (strain BP-1)
           GN=clpP1 PE=3 SV=1
          Length = 229

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 147 DLVVSELLF---HSPQGDYYLWFAGPERG*NVGLPFYL*TKFLLPIKCTL 7
           D +V++LLF     P+ D YL+   P      G+  Y   K + P  CTL
Sbjct: 73  DSIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTL 122
tr_hit_id O65527
Definition tr|O65527|O65527_ARATH Putative uncharacterized protein F4D11.60 (Putative uncharacterized protein AT4g32740) OS=Arabidopsis thaliana
Align length 107
Score (bit) 43.1
E-value 0.009
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917175|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_C03.
         (540 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O65527|O65527_ARATH Putative uncharacterized protein F4D11.60...    43   0.009
tr|Q7XJ57|Q7XJ57_ARATH At4g32740 OS=Arabidopsis thaliana PE=2 SV=1     43   0.012
tr|A7P5B2|A7P5B2_VITVI Chromosome chr4 scaffold_6, whole genome ...    37   0.86 
tr|Q948S5|Q948S5_TOBAC Myb OS=Nicotiana tabacum GN=NtmybA2 PE=2 ...    36   1.1  
tr|Q948S6|Q948S6_TOBAC Myb OS=Nicotiana tabacum GN=NtmybA1 PE=2 ...    36   1.5  
tr|Q39E84|Q39E84_BURS3 Putative uncharacterized protein OS=Burkh...    34   4.3  
tr|A0KWK0|A0KWK0_SHESA UBA/THIF-type NAD/FAD binding protein OS=...    34   5.6  
tr|A0YZW7|A0YZW7_9CYAN L-sorbosone dehydrogenase OS=Lyngbya sp. ...    33   7.3  
tr|B5HZ63|B5HZ63_9ACTO LacI-family transcriptional regulatory pr...    33   9.5  
tr|Q4FZF9|Q4FZF9_MOUSE Novel protein similar to the preferential...    33   9.7  
tr|A2A8C4|A2A8C4_MOUSE Novel protein similar to the prefereentia...    33   9.7  

>tr|O65527|O65527_ARATH Putative uncharacterized protein F4D11.60
           (Putative uncharacterized protein AT4g32740)
           OS=Arabidopsis thaliana GN=F4D11.60 PE=2 SV=1
          Length = 235

 Score = 43.1 bits (100), Expect = 0.009
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
 Frame = -3

Query: 511 RAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQRLSQSMAAVLDEGKENILSAGDHGND 332
           R+ DA+G+M+ LS  +A+AY +A E+L + + E  L +       +GKEN     D   +
Sbjct: 134 RSYDAIGLMKHLSEHSATAYADALEVLGNDTPESILKKRQLNKSIQGKENQHQPHDQLGN 193

Query: 331 WFSVSPGCILVDMSSWNIPSQ-MTPARSVHQRQSFESPSMYLLREYR 194
              V   C  +D S    P +   P+ S      + SPS YLL+  R
Sbjct: 194 RSQVE--CRALDFSDCGTPGKAKVPSAS---PGGYSSPSSYLLKSCR 235


>tr|Q7XJ57|Q7XJ57_ARATH At4g32740 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 216

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
 Frame = -3

Query: 511 RAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQRLSQSMAAVLDEGKENILSAGDHGND 332
           R+ DA+G+M+ LS  +A+AY +A E+L + + E  L +       +GKEN     D   +
Sbjct: 115 RSYDAIGLMKHLSEHSATAYADALEVLGNDTPESILKKRQLNKSIQGKENQHQPHDQLGN 174

Query: 331 WFSVSPGCILVDMSSWNIPSQ-MTPARSVHQRQSFESPSMYLLREYR 194
              V   C  +D S    P +   P+ S      + SPS YLL+  R
Sbjct: 175 RSQVE--CRALDFSDCGTPGKAKIPSAS---PGGYSSPSSYLLKSCR 216


>tr|A7P5B2|A7P5B2_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032464001
           PE=4 SV=1
          Length = 229

 Score = 36.6 bits (83), Expect = 0.86
 Identities = 29/106 (27%), Positives = 44/106 (41%)
 Frame = -3

Query: 511 RAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQRLSQSMAAVLDEGKENILSAGDHGND 332
           R+ DA+G+M+ LS   A  + +A+E+L       R+  S     +    N     DH  +
Sbjct: 131 RSYDAIGLMKQLSEHTAETFADAKEVL-------RIGASEVMSKERCSSNNNHDPDHQLE 183

Query: 331 WFSVSPGCILVDMSSWNIPSQMTPARSVHQRQSFESPSMYLLREYR 194
             S      ++D S    P + T          F SPS YLL+  R
Sbjct: 184 NHSHLASERVLDFSDCGTPGKETTKGKSSAAPGFSSPSSYLLKGCR 229


>tr|Q948S5|Q948S5_TOBAC Myb OS=Nicotiana tabacum GN=NtmybA2 PE=2 SV=1
          Length = 1042

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
 Frame = -3

Query: 511  RAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQ--RLSQSMAAVLDEGKENILSAGDHG 338
            R+ DA+G+M+ LS Q A A+ +A+E+L   + E   R   S     DE   ++LSA    
Sbjct: 943  RSYDAIGLMKQLSEQTAGAFADAQEVLGGETPESILRGRNSKNQKADE-NHSLLSA---- 997

Query: 337  NDWFSVSPGCILVDMSSWNIPSQMTPARS-VHQRQSFESPSMYLLREYR 194
                +V      +D S    P +     +      SF SPS YLL+  R
Sbjct: 998  ----NVMSERRTLDFSECGSPGKGKETENFCTSNNSFSSPSSYLLKGCR 1042


>tr|Q948S6|Q948S6_TOBAC Myb OS=Nicotiana tabacum GN=NtmybA1 PE=2 SV=1
          Length = 1003

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
 Frame = -3

Query: 511  RAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQRLSQSMAAVLDEGKENILSAGDHGND 332
            R+ DA+G+M+ LS Q A +  +A +IL S + E  LS+  +      +   L A +  ++
Sbjct: 904  RSYDAIGLMKQLSEQTAPSIADAHQILGSETPETNLSKRNSKKPKADENCTLLASNATSE 963

Query: 331  WFSVSPGCILVDMSSWNIPSQ-MTPARSVHQRQSFESPSMYLLREYR 194
              +       +D +   IP +     +      SF SPS YLL+  R
Sbjct: 964  RRT-------LDFNECGIPGKGKETTKFGSNNNSFSSPSSYLLKYCR 1003


>tr|Q39E84|Q39E84_BURS3 Putative uncharacterized protein
           OS=Burkholderia sp. (strain 383) GN=Bcep18194_A5638 PE=4
           SV=1
          Length = 221

 Score = 34.3 bits (77), Expect = 4.3
 Identities = 26/80 (32%), Positives = 37/80 (46%)
 Frame = -3

Query: 532 ERGFLAYRAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQRLSQSMAAVLDEGKENILS 353
           ER F+  +A  AL V       A S +M+ EE L S+S  + L               L+
Sbjct: 91  ERQFV--KAAAALDVALAALLVARSEFMQVEEELRSVSVRKVL---------------LN 133

Query: 352 AGDHGNDWFSVSPGCILVDM 293
            G H +D+F+VS  CI  D+
Sbjct: 134 VGTHNSDYFNVSNSCIATDL 153


>tr|A0KWK0|A0KWK0_SHESA UBA/THIF-type NAD/FAD binding protein
           OS=Shewanella sp. (strain ANA-3) GN=Shewana3_1938 PE=4
           SV=1
          Length = 338

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = -2

Query: 278 PISNDASSQCSSETKL*KSIHVFATGVSLIALSKNFLVLPSTTKTLLSVNFSF-----TL 114
           P    A   CSS+  L  S+ V A+  +L+A+    L  PST+ T  + N +F      +
Sbjct: 194 PSDTRAPQNCSSQGVLGPSVGVMASMQALLAMQLLLLATPSTSATKQTANQTFEEASQPI 253

Query: 113 PKVITICGLQGRKEAKMLAFH 51
                + G   R +AK+L +H
Sbjct: 254 ASTRALLGRFWRFDAKLLQWH 274


>tr|A0YZW7|A0YZW7_9CYAN L-sorbosone dehydrogenase OS=Lyngbya sp. PCC
           8106 GN=L8106_03849 PE=4 SV=1
          Length = 617

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 442 EEILSSLSTEQRLSQSMAAVLDEGKENILSAGDHGNDWFS 323
           +++  +L  +Q L  S    L  GK+N +  GD GNDW S
Sbjct: 85  DQLFGNLGDDQLLGNSGNDTLWGGKQNDILTGDEGNDWLS 124


>tr|B5HZ63|B5HZ63_9ACTO LacI-family transcriptional regulatory
           protein OS=Streptomyces sviceus ATCC 29083 GN=SSEG_04698
           PE=4 SV=1
          Length = 341

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 27/64 (42%), Positives = 31/64 (48%)
 Frame = -3

Query: 529 RGFLAYRAEDALGVMQCLSRQAASAYMEAEEILSSLSTEQRLSQSMAAVLDEGKENILSA 350
           RG      ED LGVM C S Q+AS   EAE +  SL  EQR+   +    D    NI S 
Sbjct: 82  RGAERAAREDGLGVMVCNSAQSASE--EAEYL--SLFAEQRVRGVLLTPSDASGRNIDSF 137

Query: 349 GDHG 338
             HG
Sbjct: 138 RRHG 141


>tr|Q4FZF9|Q4FZF9_MOUSE Novel protein similar to the preferentially
           expressed antigen in melanoma like (Pramel) family
           OS=Mus musculus GN=OTTMUSG00000010136 PE=2 SV=1
          Length = 481

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 28/100 (28%), Positives = 40/100 (40%)
 Frame = +1

Query: 28  QKLSLQIKWKANILASFRPCKPQIVITLGRVKEKFTDNKVFVVEGKTKKFFDNAINDTPV 207
           ++L L I W  + LASF PC  QI   L ++       K+F     T       I +  V
Sbjct: 207 EELELHIDWTLSTLASFAPCLGQIK-NLRKLHLTLVHEKLF-----TFLCTSTDIKEKSV 260

Query: 208 ANTWMDFQSFVSDEHCELASFEMGCSTMTYLPVCIRERLK 327
                 F    S +H +LA        M  L VC++  L+
Sbjct: 261 TKFISQFSKLNSLQHLDLAGLYFLTGHMNELLVCLKTPLE 300