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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917178
Clone id YMU001_000097_C06
Library
Length 351
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCATTTGGTGCATAGGGCTCACTCCCATGGTTTGCAGGTGCATCCATATACTTTCAGGA
ATGAAAACCAGTTCTTGCATTTTGACTTCAATCAAGATCCTTATCAAGAGTACCAATTTT
GGATAAGCATAATGAAGGTGGATGGAATTTTCACAGATTTTCGAGGTAGCTTGCACATGT
ACCAAGAGTGGACATCACCAATGAAGTTGGTGATGGGTCCCTCTGCTGTCACCTGGCTGG
ACACATTTTCCAAATTGTTATTTTCTCATAAATATAAGCTTCCATAGTCTCAGCAATGTT
TAAATAATTCTTTATCATCTTTACTGCTGGAGTGTGCAAGCTACATCTGTA
■■Homology search results ■■ -
sp_hit_id Q7Y208
Definition sp|Q7Y208|GLPQ3_ARATH Probable glycerophosphoryl diester phosphodiesterase 3 OS=Arabidopsis thaliana
Align length 54
Score (bit) 34.3
E-value 0.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917178|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_C06.
         (351 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7Y208|GLPQ3_ARATH Probable glycerophosphoryl diester phospho...    34   0.20 
sp|Q9SZ11|GLPQ2_ARATH Probable glycerophosphoryl diester phospho...    34   0.20 
sp|Q57362|Y195A_HAEIN Uncharacterized mscS family protein HI0195...    31   1.7  
sp|P09394|GLPQ_ECOLI Glycerophosphoryl diester phosphodiesterase...    31   2.2  
sp|Q7T0V6|NTP7A_XENLA Sodium/bile acid cotransporter 7-A OS=Xeno...    30   2.8  
sp|Q5ZJH8|NTCP7_CHICK Sodium/bile acid cotransporter 7 OS=Gallus...    30   2.8  
sp|Q52KD1|NTP7B_XENLA Sodium/bile acid cotransporter 7-B OS=Xeno...    30   3.7  
sp|Q28HF8|NTCP7_XENTR Sodium/bile acid cotransporter 7 OS=Xenopu...    30   3.7  
sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=M...    30   4.8  
sp|P48381|RFX3_MOUSE Transcription factor RFX3 OS=Mus musculus G...    29   6.3  
sp|P48380|RFX3_HUMAN Transcription factor RFX3 OS=Homo sapiens G...    29   6.3  
sp|Q06282|GLPQ_HAEIN Glycerophosphoryl diester phosphodiesterase...    29   6.3  
sp|Q9Y705|ALP4_SCHPO Spindle pole body component alp4 OS=Schizos...    29   6.3  
sp|Q8DS44|SYY_STRMU Tyrosyl-tRNA synthetase OS=Streptococcus mut...    29   8.2  

>sp|Q7Y208|GLPQ3_ARATH Probable glycerophosphoryl diester
           phosphodiesterase 3 OS=Arabidopsis thaliana GN=GPDL3
           PE=1 SV=2
          Length = 763

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWI--SIMKVDGIFTDF 161
           LV  AH  GLQV+   F N+   + ++++ DP  EY  ++      VDG+ +DF
Sbjct: 290 LVQDAHKAGLQVYVSGFANDVD-IAYNYSSDPVSEYLSFVDNGDFSVDGVLSDF 342


>sp|Q9SZ11|GLPQ2_ARATH Probable glycerophosphoryl diester
           phosphodiesterase 2 OS=Arabidopsis thaliana GN=GPDL2
           PE=1 SV=2
          Length = 759

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWI--SIMKVDGIFTDF 161
           LV  AH  GL+V    F N+    H D++ DP  EY  ++      VDG+ +DF
Sbjct: 284 LVQDAHKAGLEVFVSGFANDIDIAH-DYSFDPVSEYLSFVDNGNFSVDGVLSDF 336


>sp|Q57362|Y195A_HAEIN Uncharacterized mscS family protein HI0195.1
           OS=Haemophilus influenzae GN=HI0195.1 PE=1 SV=1
          Length = 1111

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 48  YTFRNENQFLHFDFNQDPYQEY-QFWISIMKVDGIFTD 158
           + F+N  +F H+ F+   Y  +  FWIS+ + +GIF +
Sbjct: 564 FFFKNPEEFWHWSFSMAGYWWFFTFWISLFRPNGIFVN 601


>sp|P09394|GLPQ_ECOLI Glycerophosphoryl diester phosphodiesterase
           OS=Escherichia coli (strain K12) GN=glpQ PE=1 SV=2
          Length = 358

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDF 161
           +V  A  + L VHPYT R++      ++  D  Q Y    +   V+G+FTDF
Sbjct: 299 MVQDAQQNKLVVHPYTVRSDKLP---EYTPDVNQLYDALYNKAGVNGLFTDF 347


>sp|Q7T0V6|NTP7A_XENLA Sodium/bile acid cotransporter 7-A OS=Xenopus
           laevis GN=slc10a7-A PE=2 SV=1
          Length = 343

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -2

Query: 104 IRILIEVKMQELVFIPESIWMHLQTMGVSPMHQ 6
           +++ + V++  LVF P +IW+ LQ + ++P+++
Sbjct: 70  VKLHLFVQLFTLVFFPTAIWLFLQVLSLTPINE 102


>sp|Q5ZJH8|NTCP7_CHICK Sodium/bile acid cotransporter 7 OS=Gallus
           gallus GN=SLC10A7 PE=2 SV=1
          Length = 333

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -2

Query: 104 IRILIEVKMQELVFIPESIWMHLQTMGVSPMHQ 6
           +++ + V++  LVF P +IW+ LQ + ++P+++
Sbjct: 70  VKLHLFVQIFTLVFFPTAIWLFLQLLSITPINE 102


>sp|Q52KD1|NTP7B_XENLA Sodium/bile acid cotransporter 7-B OS=Xenopus
           laevis GN=slc10a7-B PE=2 SV=1
          Length = 343

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -2

Query: 104 IRILIEVKMQELVFIPESIWMHLQTMGVSPMHQ 6
           +++ + V++  LVF P +IW+ LQ + ++P+++
Sbjct: 70  VKLHLFVQLFTLVFFPTAIWIFLQVLSLTPINE 102


>sp|Q28HF8|NTCP7_XENTR Sodium/bile acid cotransporter 7 OS=Xenopus
           tropicalis GN=slc10a7 PE=2 SV=1
          Length = 343

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -2

Query: 104 IRILIEVKMQELVFIPESIWMHLQTMGVSPMHQ 6
           +++ + V++  LVF P +IW+ LQ + ++P+++
Sbjct: 70  VKLHLFVQLFTLVFFPTAIWVFLQVLSLTPINE 102


>sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus
           musculus GN=Peg10 PE=1 SV=2
          Length = 958

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   HLVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQ 107
           +L+H  H H   VHP+  ++ +Q LH   + DP+Q
Sbjct: 547 YLLHHVHPH---VHPHMHQHLHQHLHQFLHPDPHQ 578


>sp|P48381|RFX3_MOUSE Transcription factor RFX3 OS=Mus musculus
           GN=Rfx3 PE=2 SV=2
          Length = 749

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 21  HSHGLQVHPYTFRNENQ--FLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGS 170
           H +G++V P +  N  Q    +    Q P Q+ Q +  + KVDG+   F GS
Sbjct: 250 HYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGS 301
tr_hit_id A9RVT6
Definition tr|A9RVT6|A9RVT6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 66
Score (bit) 121.0
E-value 2.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917178|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_C06.
         (351 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RVT6|A9RVT6_PHYPA Predicted protein OS=Physcomitrella paten...   121   2e-26
tr|A9PFJ5|A9PFJ5_POPTR Putative uncharacterized protein OS=Popul...   119   1e-25
tr|B8LKP2|B8LKP2_PICSI Putative uncharacterized protein OS=Picea...   114   2e-24
tr|Q9C907|Q9C907_ARATH Putative glycerophosphodiester phosphodie...   112   1e-23
tr|A7PD94|A7PD94_VITVI Chromosome chr17 scaffold_12, whole genom...   111   2e-23
tr|B6TLZ9|B6TLZ9_MAIZE Glycerophosphoryl diester phosphodiestera...   110   5e-23
tr|B8A9U7|B8A9U7_ORYSI Putative uncharacterized protein OS=Oryza...   109   8e-23
tr|Q8LR39|Q8LR39_ORYSJ cDNA clone:006-311-E04, full insert seque...   108   1e-22
tr|A2ZY41|A2ZY41_ORYSJ Putative uncharacterized protein OS=Oryza...   107   2e-22
tr|Q9SD81|Q9SD81_ARATH Glycerophosphodiester phosphodiesterase-l...   106   7e-22
tr|Q6AUZ6|Q6AUZ6_ORYSJ Os03g0603600 protein OS=Oryza sativa subs...   103   4e-21
tr|A2XJB6|A2XJB6_ORYSI Putative uncharacterized protein OS=Oryza...   103   4e-21
tr|B4FNF6|B4FNF6_MAIZE Putative uncharacterized protein OS=Zea m...   102   9e-21
tr|A8CF52|A8CF52_BRACM Glycerophosphodiester phosphodiesterase O...   100   6e-20
tr|A7Q8D8|A7Q8D8_VITVI Chromosome chr5 scaffold_64, whole genome...    97   3e-19
tr|Q6YVY7|Q6YVY7_ORYSJ Os07g0602800 protein OS=Oryza sativa subs...    96   7e-19
tr|A7Q212|A7Q212_VITVI Chromosome chr13 scaffold_45, whole genom...    94   4e-18
tr|A7P276|A7P276_VITVI Chromosome chr19 scaffold_4, whole genome...    91   2e-17
tr|A2YNG3|A2YNG3_ORYSI Putative uncharacterized protein OS=Oryza...    91   4e-17
tr|A3BLX8|A3BLX8_ORYSJ Putative uncharacterized protein OS=Oryza...    81   2e-14
tr|A0ZHW5|A0ZHW5_NODSP Phytase OS=Nodularia spumigena CCY 9414 G...    60   4e-08
tr|B4C244|B4C244_9CHRO Glycerophosphoryl diester phosphodiestera...    59   9e-08
tr|B7K105|B7K105_SYNP8 Glycerophosphoryl diester phosphodiestera...    59   2e-07
tr|A3IKA2|A3IKA2_9CHRO Glycerophosphoryl diester phosphodiestera...    58   3e-07
tr|B1WZU3|B1WZU3_CYAA5 Glycerophosphoryl diester phosphodiestera...    56   8e-07
tr|A3ITD9|A3ITD9_9CHRO Glycerophosphoryl diester phosphodiestera...    56   1e-06
tr|A0YR65|A0YR65_9CYAN Glycerophosphoryl diester phosphodiestera...    56   1e-06
tr|A8IS67|A8IS67_CHLRE Glycerophosphoryl diester phosphodiestera...    55   2e-06
tr|A8IS69|A8IS69_CHLRE Glycerophosphoryl diester phosphodiestera...    54   3e-06
tr|Q5UVY6|Q5UVY6_CRYPV Glycerophosphodiester phosphodiesterase-l...    54   4e-06

>tr|A9RVT6|A9RVT6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_71055 PE=4 SV=1
          Length = 332

 Score =  121 bits (303), Expect = 2e-26
 Identities = 49/66 (74%), Positives = 60/66 (90%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           L+ RAH+H LQVHPYT+RNEN+FLHFDF+QDPYQEY++WI  M VDG+FTDF G+LH+YQ
Sbjct: 264 LIKRAHAHNLQVHPYTYRNENKFLHFDFHQDPYQEYRYWIHNMSVDGMFTDFTGTLHLYQ 323

Query: 186 EWTSPM 203
           EWTSP+
Sbjct: 324 EWTSPL 329


>tr|A9PFJ5|A9PFJ5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 399

 Score =  119 bits (297), Expect = 1e-25
 Identities = 56/93 (60%), Positives = 71/93 (76%)
 Frame = +3

Query: 3   HLVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMY 182
           +LV RAH+H LQVHPYT+RNEN+FLHFDF+QDPY+EY +W++ ++VDG+FTDF GSLH +
Sbjct: 307 NLVARAHAHDLQVHPYTYRNENKFLHFDFHQDPYEEYDYWLNNIRVDGLFTDFTGSLHNF 366

Query: 183 QEWTSPMKLVMGPSAVTWLDTFSKLLFSHKYKL 281
           QEWTSP+    G       +T SKLL  HK  L
Sbjct: 367 QEWTSPLSKDGGDD-----NTASKLL--HKIAL 392


>tr|B8LKP2|B8LKP2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 399

 Score =  114 bits (286), Expect = 2e-24
 Identities = 48/89 (53%), Positives = 66/89 (74%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV +AH+H LQVHPYT+RNEN FLHF+F++DPY EY++WI ++ VDG+FTDF GS H YQ
Sbjct: 309 LVAKAHAHDLQVHPYTYRNENVFLHFNFHEDPYAEYEYWIKVIGVDGLFTDFTGSFHSYQ 368

Query: 186 EWTSPMKLVMGPSAVTWLDTFSKLLFSHK 272
            WTSP +     +A+  L   ++++ S K
Sbjct: 369 RWTSPTESDKDDTALNLLHKIAEMILSFK 397


>tr|Q9C907|Q9C907_ARATH Putative glycerophosphodiester
           phosphodiesterase; 42559-40170 (Putative
           glycerophosphodiester phosphodiesterase) OS=Arabidopsis
           thaliana GN=At1g74210 PE=2 SV=1
          Length = 392

 Score =  112 bits (279), Expect = 1e-23
 Identities = 45/66 (68%), Positives = 59/66 (89%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV RAH+H LQVHPYT+RNE++FLH++F+QDPY+EY +WI+ + VDG+FTDF GSLH +Q
Sbjct: 303 LVKRAHAHNLQVHPYTYRNEHEFLHYNFSQDPYKEYDYWINEIGVDGLFTDFTGSLHNFQ 362

Query: 186 EWTSPM 203
           EWTSP+
Sbjct: 363 EWTSPL 368


>tr|A7PD94|A7PD94_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016186001
           PE=4 SV=1
          Length = 417

 Score =  111 bits (277), Expect = 2e-23
 Identities = 46/66 (69%), Positives = 58/66 (87%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV +AH+H LQVHPYT+RNENQFLHF+F+QDPY EY +WI+ + VDG+FTDF GSL+ +Q
Sbjct: 324 LVAKAHAHDLQVHPYTYRNENQFLHFNFHQDPYAEYDYWINKIGVDGLFTDFTGSLYNFQ 383

Query: 186 EWTSPM 203
           EWTSP+
Sbjct: 384 EWTSPL 389


>tr|B6TLZ9|B6TLZ9_MAIZE Glycerophosphoryl diester phosphodiesterase
           OS=Zea mays PE=2 SV=1
          Length = 415

 Score =  110 bits (274), Expect = 5e-23
 Identities = 47/67 (70%), Positives = 54/67 (80%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV RAH+  LQVHPYTFRNENQ+LHFDF QDPY EY +W+  + VDG+FTDF GSLH YQ
Sbjct: 324 LVARAHALRLQVHPYTFRNENQYLHFDFRQDPYAEYAYWLDEVAVDGLFTDFTGSLHKYQ 383

Query: 186 EWTSPMK 206
           EWT P +
Sbjct: 384 EWTRPYR 390


>tr|B8A9U7|B8A9U7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03844 PE=4 SV=1
          Length = 540

 Score =  109 bits (272), Expect = 8e-23
 Identities = 49/80 (61%), Positives = 61/80 (76%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV RAH+H LQVHPYT+RNENQFLH +F+QDPY EY FWI+ M VDG+FTDF GSLH YQ
Sbjct: 304 LVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHRYQ 363

Query: 186 EWTSPMKLVMGPSAVTWLDT 245
           E  +P       +++ +L+T
Sbjct: 364 ELVAPHAKDETANSLLFLET 383


>tr|Q8LR39|Q8LR39_ORYSJ cDNA clone:006-311-E04, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0512C01.48 PE=2 SV=1
          Length = 391

 Score =  108 bits (271), Expect = 1e-22
 Identities = 47/65 (72%), Positives = 54/65 (83%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV RAH+H LQVHPYT+RNENQFLH +F+QDPY EY FWI+ M VDG+FTDF GSLH YQ
Sbjct: 303 LVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHRYQ 362

Query: 186 EWTSP 200
           E  +P
Sbjct: 363 ELVAP 367


>tr|A2ZY41|A2ZY41_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003463 PE=4 SV=1
          Length = 490

 Score =  107 bits (268), Expect = 2e-22
 Identities = 48/71 (67%), Positives = 55/71 (77%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV RAH+H LQVHPYT+RNENQFLH +F+QDPY EY FWI+ M VDG+FTDF GSLH YQ
Sbjct: 250 LVARAHAHNLQVHPYTYRNENQFLHLNFHQDPYAEYDFWINSMGVDGLFTDFTGSLHRYQ 309

Query: 186 EWTSPMKLVMG 218
           E     K + G
Sbjct: 310 ELFLETKFIDG 320


>tr|Q9SD81|Q9SD81_ARATH Glycerophosphodiester phosphodiesterase-like
           protein (At5g08030) OS=Arabidopsis thaliana
           GN=F13G24.230 PE=2 SV=1
          Length = 372

 Score =  106 bits (264), Expect = 7e-22
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +3

Query: 6   LVHRAHSHGLQVHPYTFRNENQFLHFDFNQDPYQEYQFWISIMKVDGIFTDFRGSLHMYQ 185
           LV RAHS  LQVHPYT+RNENQFLH +FNQDPY EY +W++ + VDG+FTDF GSLH YQ
Sbjct: 303 LVARAHSRNLQVHPYTYRNENQFLHLEFNQDPYLEYDYWLNKIGVDGLFTDFTGSLHNYQ 362

Query: 186 EWTSPM 203
           E  SP+
Sbjct: 363 ELKSPL 368