BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917195|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_E03.
         (540 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2NW05|TYPH_SODGM Thymidine phosphorylase OS=Sodalis glossini...    32   2.6  
sp|Q9ZJM5|DNAB_HELPJ Replicative DNA helicase OS=Helicobacter py...    30   5.7  
sp|A7MGA9|TYPH_ENTS8 Thymidine phosphorylase OS=Enterobacter sak...    30   9.8  

>sp|Q2NW05|TYPH_SODGM Thymidine phosphorylase OS=Sodalis
           glossinidius (strain morsitans) GN=deoA PE=3 SV=1
          Length = 443

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -2

Query: 476 RTAELTIALCDQMLMSGGTLQVEDVARVYALR 381
           R  E+T+ALC +MLM  G    ED AR   +R
Sbjct: 271 RLFEVTMALCSEMLMIAGLAHSEDAARTALVR 302


>sp|Q9ZJM5|DNAB_HELPJ Replicative DNA helicase OS=Helicobacter
           pylori J99 GN=dnaB PE=3 SV=1
          Length = 486

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = +2

Query: 371 GNSASKHKHEQHPQLARCLLTSASDHKVLLLALQSSNIKALDLQNR 508
           GN A+K +HEQ  +++R L T A + ++ ++AL   N     L+NR
Sbjct: 320 GNKATKERHEQIAEISRELKTLARELEIPIIALVQLN---RSLENR 362


>sp|A7MGA9|TYPH_ENTS8 Thymidine phosphorylase OS=Enterobacter
           sakazakii (strain ATCC BAA-894) GN=deoA PE=3 SV=1
          Length = 440

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -2

Query: 476 RTAELTIALCDQMLMSGGTLQVEDVAR 396
           R  E+T+ALC +ML+SGG  + E  AR
Sbjct: 271 RLLEVTMALCVEMLLSGGLAKDETEAR 297

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917195|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_E03.
         (540 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2EG24|A2EG24_TRIVA Surface antigen BspA-like OS=Trichomonas ...    34   4.3  
tr|Q73RS3|Q73RS3_TREDE Carbon starvation protein CstA, putative ...    34   5.6  
tr|B0WL03|B0WL03_CULQU Putative uncharacterized protein OS=Culex...    33   7.3  
tr|A3WKH3|A3WKH3_9GAMM Two-component system regulatory protein O...    33   9.5  

>tr|A2EG24|A2EG24_TRIVA Surface antigen BspA-like OS=Trichomonas
           vaginalis G3 GN=TVAG_269110 PE=4 SV=1
          Length = 1070

 Score = 34.3 bits (77), Expect = 4.3
 Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
 Frame = -2

Query: 446 DQMLMSG----GTLQVEDVARVYALRLSCHRPPVFQKRWAIEVAVCIRFVQLKLIRPSS- 282
           D++ +SG    G++ +     +Y  +    R P+F     +E++  + F+ + L+R ++ 
Sbjct: 220 DRLNISGLYAFGSIDLSSAELIYINKNQGDRMPIFISNHLVELS--LPFILIDLLRKNTD 277

Query: 281 -----KGEVHENAV*LVAAFFSNLIFLSEDYVCNRLYSHVILDFAECLSFSKDVS 132
                K ++ E    +   FFSN I L E  V +    H++    EC    K ++
Sbjct: 278 LSNLTKVQIFEGGAEITEHFFSNCINLKEFSVISTSSFHIVYVNEECFQNCKSIA 332


>tr|Q73RS3|Q73RS3_TREDE Carbon starvation protein CstA, putative
           OS=Treponema denticola GN=TDE_0012 PE=4 SV=1
          Length = 484

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = +2

Query: 305 VAQIGCTQRPQLPIFFGIPEACGNSASKHKHEQHPQLARCLLTSASDHKVLLLALQSSNI 484
           +A +  +  P+ P+ F I  ACG  +  H   Q P +ARC+ + A  HKV   A+    I
Sbjct: 220 LANVHPSNLPRWPLLF-ITIACGAISGFHA-TQSPLMARCIKSEADGHKVFYGAMVGEGI 277

Query: 485 KAL 493
            AL
Sbjct: 278 IAL 280


>tr|B0WL03|B0WL03_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ008271 PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
 Frame = +2

Query: 239 MLLQATQHFHEPLLCLKALSA*VAQIGCTQRPQLPIFFGIPEACGNSASKHKHEQHPQLA 418
           +LL  ++ F EP L  +      AQ+ C  RP L +   +P        +H H++H   +
Sbjct: 246 LLLSQSRLFEEPELMQRCWEVIDAQVCCEHRPNLEVV--VPSTA--RQHQHHHQRHHSYS 301

Query: 419 RC----LLTSASD--HKVLLLALQSSNIK 487
            C    LL    D   KV+++A QSS ++
Sbjct: 302 CCQQQVLLAREKDQEEKVVVVANQSSAVE 330


>tr|A3WKH3|A3WKH3_9GAMM Two-component system regulatory protein
           OS=Idiomarina baltica OS145 GN=OS145_09288 PE=4 SV=1
          Length = 212

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +2

Query: 356 IPEACGNSASKHKHEQHPQLARCLLTSASDHKVLLLAL 469
           +P   G  A++H  + HPQL   +LT+  DH++++ A+
Sbjct: 57  MPRMDGIEATRHLRQTHPQLPILILTTFDDHELIIKAI 94