NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917201
Clone id YMU001_000097_E10
Library
Length 465
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGGGGCCAGCATTGGCCTCAACACCCTTGAAGAAGGTACGGGCGCGGATGAGCTTGTGG
TTGCAGTTAATAGAGCGGTTAAATGAGGAAGATCTTTCATAGGTGCCTTTCCAACGAAGA
GAGAATGGACGTAAAGCTGTGATCGTGCAAAGTTGAGGTACTCTCACTCCATCTCAGATC
AGGAAACGAGATAGTGTTTCACATTACAACATTTGCATTAGAATAGAGCAAGAATGTAAT
GTTAACTATCAAGCTTGATCACAATATTAAATGGCTACTTTAATGGAGAAACTGAGTTGA
AGAAATCCATGAGAAAGGGATGCACCATTTCTCCTTTACTTGTCGCATTAGGGATTGAGG
CATCATTGCATTTCTTATTGCAAAAAAGCACTTTTGAGGACTGAGGCTGGTTACTGGTTC
AAGCTTATGCAGTCAAATGACCCTAAACTGGCCCCCAAAATGTGC
■■Homology search results ■■ -
sp_hit_id O65351
Definition sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana
Align length 42
Score (bit) 38.5
E-value 0.014
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917201|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_E10.
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis tha...    39   0.014
sp|P40468|TAO3_YEAST Cell morphogenesis protein PAG1 OS=Saccharo...    32   1.1  
sp|Q32PZ9|CC130_RAT Coiled-coil domain-containing protein 130 OS...    32   1.3  

>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis
           thaliana GN=ARA12 PE=1 SV=1
          Length = 757

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -2

Query: 128 PFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAGP 3
           P    WKG  E  ++F  S+ CN KLI AR F +G E+  GP
Sbjct: 156 PIPSSWKGGCEAGTNFTASL-CNRKLIGARFFARGYESTMGP 196


>sp|P40468|TAO3_YEAST Cell morphogenesis protein PAG1 OS=Saccharomyces
            cerevisiae GN=TAO3 PE=1 SV=1
          Length = 2376

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -1

Query: 198  NTISFPDLRWSEST--STLHDHSFTSILSSLERHL*KIFL 85
            N ISFP L WS +   S++H+  F  +LS L + + KI L
Sbjct: 1898 NLISFPQLFWSITACLSSIHEQEFIEVLSCLSKFISKIDL 1937


>sp|Q32PZ9|CC130_RAT Coiled-coil domain-containing protein 130
           OS=Rattus norvegicus GN=Ccdc130 PE=2 SV=1
          Length = 385

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -3

Query: 418 TSNQPQSSKVLFCNKKCNDASIPNATSKGEMVHP 317
           T+  P++SK L   + C+D ++P  +S+ +++HP
Sbjct: 335 TAEAPRTSKTLESKRNCSDQALPLGSSQEDLLHP 368
tr_hit_id A7QEV6
Definition tr|A7QEV6|A7QEV6_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera
Align length 43
Score (bit) 48.1
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917201|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_E10.
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QEV6|A7QEV6_VITVI Chromosome chr16 scaffold_86, whole genom...    48   2e-04
tr|A7PY74|A7PY74_VITVI Chromosome chr15 scaffold_37, whole genom...    47   5e-04
tr|A5BFE5|A5BFE5_VITVI Putative uncharacterized protein OS=Vitis...    47   5e-04
tr|A7PY66|A7PY66_VITVI Chromosome chr15 scaffold_37, whole genom...    46   8e-04
tr|A5B179|A5B179_VITVI Putative uncharacterized protein OS=Vitis...    46   8e-04
tr|A7QEX7|A7QEX7_VITVI Chromosome chr16 scaffold_86, whole genom...    46   0.001
tr|A7PY67|A7PY67_VITVI Chromosome chr15 scaffold_37, whole genom...    45   0.002
tr|A5CA83|A5CA83_VITVI Putative uncharacterized protein OS=Vitis...    45   0.002
tr|A9RTR7|A9RTR7_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.002
tr|A7PY68|A7PY68_VITVI Chromosome chr15 scaffold_37, whole genom...    44   0.003
tr|Q2HRK7|Q2HRK7_MEDTR Protease-associated PA; Proteinase inhibi...    44   0.004
tr|A9T5U4|A9T5U4_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.004
tr|B8LLN6|B8LLN6_PICSI Putative uncharacterized protein OS=Picea...    44   0.005
tr|A9XG40|A9XG40_TOBAC Subtilisin-like protease OS=Nicotiana tab...    44   0.005
tr|A7QJ28|A7QJ28_VITVI Chromosome chr2 scaffold_105, whole genom...    44   0.005
tr|A7PLM3|A7PLM3_VITVI Chromosome chr7 scaffold_20, whole genome...    44   0.005
tr|A9XG41|A9XG41_TOBAC Subtilisin-like protease OS=Nicotiana tab...    43   0.007
tr|Q9SVT2|Q9SVT2_ARATH Subtilisin proteinase-like OS=Arabidopsis...    43   0.009
tr|Q93YP3|Q93YP3_ARATH Subtilisin proteinase-like OS=Arabidopsis...    43   0.009
tr|Q8GUK4|Q8GUK4_ARATH Subtilisin proteinase-like OS=Arabidopsis...    43   0.009
tr|A7P7W9|A7P7W9_VITVI Chromosome chr3 scaffold_8, whole genome ...    43   0.009
tr|A7PY75|A7PY75_VITVI Chromosome chr15 scaffold_37, whole genom...    42   0.012
tr|A5AJG6|A5AJG6_VITVI Putative uncharacterized protein OS=Vitis...    42   0.012
tr|A7NTY2|A7NTY2_VITVI Chromosome chr18 scaffold_1, whole genome...    42   0.015
tr|Q9ZSB0|Q9ZSB0_ARATH Putative subtilisin-like protease OS=Arab...    42   0.020
tr|Q7XTY8|Q7XTY8_ORYSJ Os04g0573300 protein OS=Oryza sativa subs...    42   0.020
tr|Q01JW5|Q01JW5_ORYSA OSIGBa0147H17.8 protein OS=Oryza sativa G...    42   0.020
tr|B8LQY5|B8LQY5_PICSI Putative uncharacterized protein OS=Picea...    42   0.020
tr|Q9SVT4|Q9SVT4_ARATH Serine protease-like protein OS=Arabidops...    41   0.026
tr|Q1EPF3|Q1EPF3_MUSAC Subtilisin-like serine proteinase, putati...    41   0.034

>tr|A7QEV6|A7QEV6_VITVI Chromosome chr16 scaffold_86, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037172001
           PE=4 SV=1
          Length = 717

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = -2

Query: 134 LRPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           L P   RWKG      SFN + +CN KLI AR FFKG+EA  G
Sbjct: 108 LGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFFKGLEAEIG 150


>tr|A7PY74|A7PY74_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026328001
           PE=3 SV=1
          Length = 804

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = -2

Query: 134 LRPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           + P   +WKG  E  + F  S NCN KLI AR FFKG EA AG
Sbjct: 198 MSPVPSKWKGACEEGTKFTSS-NCNKKLIGARAFFKGYEARAG 239


>tr|A5BFE5|A5BFE5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_040910 PE=3 SV=1
          Length = 1109

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = -2

Query: 134 LRPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           + P   +WKG  E  + F  S NCN KLI AR FFKG EA AG
Sbjct: 150 MSPVPSKWKGACEEGTKFTSS-NCNKKLIGARAFFKGYEARAG 191


>tr|A7PY66|A7PY66_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026319001
           PE=3 SV=1
          Length = 768

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 22/42 (52%), Positives = 26/42 (61%)
 Frame = -2

Query: 131 RPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           RP   RWKG  E+ + F    NCN KLI AR ++KG EA AG
Sbjct: 166 RPVPSRWKGVCEQGTKFTAK-NCNKKLIGARAYYKGYEATAG 206


>tr|A5B179|A5B179_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_030628 PE=3 SV=1
          Length = 706

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 22/42 (52%), Positives = 26/42 (61%)
 Frame = -2

Query: 131 RPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           RP   RWKG  E+ + F    NCN KLI AR ++KG EA AG
Sbjct: 166 RPVPSRWKGVCEQGTKFTAK-NCNKKLIGARAYYKGYEATAG 206


>tr|A7QEX7|A7QEX7_VITVI Chromosome chr16 scaffold_86, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037196001
           PE=4 SV=1
          Length = 720

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/43 (51%), Positives = 25/43 (58%)
 Frame = -2

Query: 134 LRPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           L P   RWKG      SFN + +CN KLI AR F KG+EA  G
Sbjct: 124 LGPIPSRWKGGCSSGQSFNATKHCNRKLIGARYFLKGLEAEIG 166


>tr|A7PY67|A7PY67_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026320001
           PE=3 SV=1
          Length = 767

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = -2

Query: 131 RPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           RP   RWKG  E  + F    NCN KLI AR ++KG EA AG
Sbjct: 165 RPVPSRWKGVCEEGTRFTAK-NCNRKLIGARAYYKGYEAAAG 205


>tr|A5CA83|A5CA83_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_022540 PE=3 SV=1
          Length = 1677

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = -2

Query: 131  RPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
            RP   RWKG  E  + F    NCN KLI AR ++KG EA AG
Sbjct: 1075 RPVPSRWKGVCEEGTRFTAK-NCNRKLIGARAYYKGYEAAAG 1115


>tr|A9RTR7|A9RTR7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_205498 PE=4 SV=1
          Length = 749

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 22/42 (52%), Positives = 26/42 (61%)
 Frame = -2

Query: 128 PFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAGP 3
           P   RWKG  E  + FN ++ CN KLI AR+F KG EA  GP
Sbjct: 133 PVPRRWKGACEIGTGFNSTV-CNRKLIGARSFSKGYEAMTGP 173


>tr|A7PY68|A7PY68_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026321001
           PE=4 SV=1
          Length = 767

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = -2

Query: 131 RPFSLRWKGTYERSSSFNRSINCNHKLIRARTFFKGVEANAG 6
           RP   RWKG  E  + F    NCN KLI AR ++KG EA AG
Sbjct: 165 RPVPSRWKGVCEEGTRFTAK-NCNMKLIGARAYYKGYEAAAG 205