BP917203 |
Clone id |
YMU001_000097_F02 |
Library |
YMU01 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000097_F02. |
Accession |
BP917203 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGCACAAAGTAGGTGCGTTGAGAGAACAATGGCAGGCAACGGGCGGGATAAGGAGCAACA GAACAGAGACGGTACGGCCCCCCACATTGACGAGGATCTTGCGGAGCGCCGTGTAGCTGC AGCCAGGAACTGTGCGGACGAAGGGGCGAAGGCAGGCGCAAAGGCTGGAGCAGCAGCATT TGTTTTGACGGCCATCCCCACAATTGCAGCTCCAAGATATATACCATGGGCAAAAGCACA TCTCAATTACACTGCCCAAGCATTGATCATCTCTGCAGCTTCTCTGGCCACTTACTTCAT CGTTTCTGACAAAACCATTCTTGAGTGCGCTAGAACAACATCATATGAGAGGATTCAAGC TGAGCGGGCGGCTGCTAATAGAGATGTTTGACATGTATATGTTTGAATAACCGAGTTTGA ATAAAGTTGCTGTTTGCAGCACATCTTGCTTGTAGGAACCTGACAGGTTATCTGCTGTTT TAAAGTGCTCTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q02921 |
Definition |
sp|Q02921|NO93_SOYBN Early nodulin-93 OS=Glycine max |
Align length |
83 |
Score (bit) |
56.6 |
E-value |
6.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917203|Adiantum capillus-veneris mRNA, clone: YMU001_000097_F02. (478 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q02921|NO93_SOYBN Early nodulin-93 OS=Glycine max PE=2 SV=1 57 6e-08 sp|Q9U620|MTCU_CALSI Copper-specific metallothionein-2 OS=Callin... 33 0.51 sp|Q6L8G4|KR511_HUMAN Keratin-associated protein 5-11 OS=Homo sa... 32 1.9 sp|P01063|IBBC2_SOYBN Bowman-Birk type proteinase inhibitor C-II... 32 1.9 sp|P38567|HYALP_HUMAN Hyaluronidase PH-20 OS=Homo sapiens GN=SPA... 32 1.9 sp|P01064|IBBD2_SOYBN Bowman-Birk type proteinase inhibitor D-II... 31 2.5 sp|P38568|HYALP_MACFA Hyaluronidase PH-20 OS=Macaca fascicularis... 31 2.5 sp|P01059|IBB4_DOLAX Bowman-Birk type proteinase inhibitor DE-4 ... 30 4.3 sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo sap... 30 5.6 sp|Q6L8G8|KRA57_HUMAN Keratin-associated protein 5-7 OS=Homo sap... 30 5.6 sp|P60014|KR10A_HUMAN Keratin-associated protein 10-10 OS=Homo s... 30 5.6 sp|Q5RFA3|AGT2_PONAB Alanine--glyoxylate aminotransferase 2, mit... 30 7.2 sp|Q9BYV1|AGT2_HUMAN Alanine--glyoxylate aminotransferase 2, mit... 30 7.2 sp|Q20EX3|RPOC2_OLTVI DNA-directed RNA polymerase subunit beta''... 30 7.4 sp|Q6L8G9|KRA56_HUMAN Keratin-associated protein 5-6 OS=Homo sap... 30 7.4 sp|Q2TA51|KRA55_MOUSE Keratin associated protein 5-5 OS=Mus musc... 30 7.4 sp|Q62220|KRA54_MOUSE Keratin-associated protein 5-4 OS=Mus musc... 30 7.4 sp|Q64507|KRA51_MOUSE Keratin-associated protein 5-1 OS=Mus musc... 30 7.4 sp|Q5DX21|IGS11_HUMAN Immunoglobulin superfamily member 11 OS=Ho... 30 7.4 sp|Q54BK0|NFX1_DICDI Transcriptional repressor NF-X1 homolog OS=... 29 9.6 sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo sap... 29 9.6 sp|Q03376|BAR3_CHITE Balbiani ring protein 3 OS=Chironomus tenta... 29 9.6
>sp|Q02921|NO93_SOYBN Early nodulin-93 OS=Glycine max PE=2 SV=1 Length = 105
Score = 56.6 bits (135), Expect = 6e-08 Identities = 28/83 (33%), Positives = 45/83 (54%) Frame = +2
Query: 89 ERRVAAARNCADEXXXXXXXXXXXXFVLTAIPTIAAPRYIPWAKAHLNYXXXXXXXXXXX 268 ++++A A+ C+ E V +AIPT+A+ R +PWA+A+LN+ Sbjct: 17 DQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTAT 76
Query: 269 XXXYFIVSDKTILECARTTSYER 337 YFIV+DKT+L AR S+ + Sbjct: 77 AAAYFIVADKTVLATARKNSFNQ 99
>sp|Q9U620|MTCU_CALSI Copper-specific metallothionein-2 OS=Callinectes sapidus PE=3 SV=1 Length = 64
Score = 33.5 bits (75), Expect = 0.51 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Frame = -1
Query: 247 CLGSVIEMCFCPWYISWSCN---CGDGRQNK--CCCSSLCAC 137 C GS CP S SCN CG Q K CCC + C C Sbjct: 17 CCGSTCNCTTCPSKQSCSCNDGACGSACQCKTSCCCGADCKC 58
Score = 32.0 bits (71), Expect = 1.5 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = -1
Query: 196 SCNCGDGRQNKCCCSSLCAC 137 SC CG G KCCC S C C Sbjct: 8 SCKCGSG---KCCCGSTCNC 24
>sp|Q6L8G4|KR511_HUMAN Keratin-associated protein 5-11 OS=Homo sapiens GN=KRTAP5-11 PE=2 SV=1 Length = 156
Score = 31.6 bits (70), Expect = 1.9 Identities = 18/61 (29%), Positives = 21/61 (34%) Frame = -1
Query: 325 CCSSALKNGFVRNDEVSGQRSCRDDQCLGSVIEMCFCPWYISWSCNCGDGRQNKCCCSSL 146 CCSS+ F S C+ C S + C C S C CCC S Sbjct: 91 CCSSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKPCCCQ-----SSCCQSSCFKPCCCQSS 145
Query: 145 C 143 C Sbjct: 146 C 146
>sp|P01063|IBBC2_SOYBN Bowman-Birk type proteinase inhibitor C-II OS=Glycine max PE=1 SV=2 Length = 83
Score = 31.6 bits (70), Expect = 1.9 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -1
Query: 265 SCRDDQCLGSVIEMCFCPWYISWSCNCGDGRQNKC-CCSSLCACLRPFVRTVPG 107 S DD+ ++C C + C+C D R N C CAC R++PG Sbjct: 11 SSSDDESSKPCCDLCMCTASMPPQCHCADIRLNSCHSACDRCAC----TRSMPG 60
>sp|P38567|HYALP_HUMAN Hyaluronidase PH-20 OS=Homo sapiens GN=SPAM1 PE=1 SV=1 Length = 509
Score = 31.6 bits (70), Expect = 1.9 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +1
Query: 103 CSQELCGRRGEGRRKGWSSSICFDGHPHNCSSKIYTMGKSTSQLHCPSIDHLCSFS 270 CSQ LC +G RK W+SS +P N + ++ GK T + P+++ L FS Sbjct: 376 CSQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVR-GKPTLEDLEQFS 430
>sp|P01064|IBBD2_SOYBN Bowman-Birk type proteinase inhibitor D-II OS=Glycine max PE=1 SV=2 Length = 83
Score = 31.2 bits (69), Expect = 2.5 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = -1
Query: 298 FVRNDEVSGQRSCRDDQCLGSVIEMCFCPWYISWSCNCGDGRQNKC---CCSSLCACLRP 128 F+++D+ S S DD+ ++C C + C+C D R N C C S +C +P Sbjct: 6 FLKSDQSS---SYDDDEYSKPCCDLCMCTRSMPPQCSCEDIRLNSCHSDCKSCMCTRSQP 62
>sp|P38568|HYALP_MACFA Hyaluronidase PH-20 OS=Macaca fascicularis GN=SPAM1 PE=2 SV=1 Length = 510
Score = 31.2 bits (69), Expect = 2.5 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +1
Query: 103 CSQELCGRRGEGRRKGWSSSICFDGHPHNCSSKIYTMGKSTSQLHCPSIDHLCSFS 270 CSQ LC +G RK W+SS +P N ++ GK T P+++ L FS Sbjct: 376 CSQVLCQEQGVCIRKDWNSSDYLHLNPDNFDIRLEKGGKFTVH-GKPTVEDLEEFS 430
>sp|P01059|IBB4_DOLAX Bowman-Birk type proteinase inhibitor DE-4 OS=Dolichos axillaris PE=1 SV=1 Length = 76
Score = 30.4 bits (67), Expect = 4.3 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -1
Query: 229 EMCFCPWYISWSCNCGDGRQNKC---CCSSLCACLRP 128 ++C C I C+C D R N C C S +CA P Sbjct: 17 DLCTCTKSIPPQCHCNDMRLNSCHSACKSCICALSEP 53
>sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo sapiens GN=KRTAP5-8 PE=2 SV=2 Length = 187
Score = 30.0 bits (66), Expect = 5.6 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -1
Query: 193 CNCGDGRQNKCCCSSLCACLRPFVRTVPGCSYTALRKILVNVGGR 59 C G G CC +C C +P VP CS ++ + GGR Sbjct: 17 CGSGCGGCGSSCCVPICCC-KPVCCCVPACSCSSCGSCGGSKGGR 60
>sp|Q6L8G8|KRA57_HUMAN Keratin-associated protein 5-7 OS=Homo sapiens GN=KRTAP5-7 PE=2 SV=1 Length = 165
Score = 30.0 bits (66), Expect = 5.6 Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%) Frame = -1
Query: 262 CRDDQCLGSVIEMCFCPWYISWSCNCGDGRQNKCCCSSLC-ACLRPFVRTVPGC 104 C C S + C C C C G + CC SS C C VP C Sbjct: 107 CGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCCSQSSCCVPVC 160
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PA20 |
Definition |
tr|A9PA20|A9PA20_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
95 |
Score (bit) |
64.7 |
E-value |
2.0e-09 |
Report |
|