BP917205
Clone id YMU001_000097_F04
Library
Length 331
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAGTTGAACAGCACAAAATTCTATGAAAGTCTGTCTGGTGCAGAGTACTGGCAGCACATG
CACATCAGCAGTCATACAGCAAGCGATTAGTGTTCCACTTGGAAAAGTAGCATGCAAAAC
ATTCCCTTTGAAAATTGAGAAAGTACGAGCCTTTCTAATACAAGACATGAGGTAAATTGA
CAGACTAACTACATATTGAGTAATAGAGCAAAGCAGTTCCACATCCACACTTGTCTGCCC
CTCAGCCAGCAGGTTTTGACATACCTGTCATCCTAATGGTCGCCCACAACGTCTCTTGAG
AGCAACTAGGCAGTGGGTAGAACGAACAGGC
■■Homology search results ■■ -
sp_hit_id Q54TF8
Definition sp|Q54TF8|DDX19_DICDI ATP-dependent RNA helicase ddx19 OS=Dictyostelium discoideum
Align length 48
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917205|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_F04.
(331 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54TF8|DDX19_DICDI ATP-dependent RNA helicase ddx19 OS=Dictyo... 29 8.4

>sp|Q54TF8|DDX19_DICDI ATP-dependent RNA helicase ddx19
OS=Dictyostelium discoideum GN=helC PE=2 SV=1
Length = 465

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2

Query: 17 NSMKVCLVQSTGSTCTSAVIQQAISVPLGKVACKTFPLKIEKVRAFLI 160
+++KVCL +T S +I++ + P + K L +EK+ + I
Sbjct: 239 SNVKVCLFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFI 286


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917205|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_F04.
(331 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******