BP917217
Clone id YMU001_000097_G06
Library
Length 338
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAATCGAAGCCAAAATACGCTGCCCTTCTGGATTTCCCTCACAAAAGCACTTAATAACAT
ATTCAGCAGCCATCTGTTCATCTTTATCAGACGTGTCCAACATCAAACGAGGAACAGCGT
TTAGTGCTGGCACTCCATCTGGCTCCTCTCCTACAGTTCTTTTGCCAAGAATTTCCACAT
TTCTTGCATGACCTCGAATAAGATCTCCAATACACCTCAAAGACGCGCAACGAATGGTGA
CAACTGGCACTCTTCCCTCTACAGAAAGATTGAGAAGATGATCCAGCACATTGTGCTGCA
TTAAAACCGTCTGGTTGGCAATGGCATTAGCATCCTTT
■■Homology search results ■■ -
sp_hit_id B0F9L4
Definition sp|B0F9L4|GOGC6_ARATH Golgin candidate 6 OS=Arabidopsis thaliana
Align length 111
Score (bit) 114.0
E-value 2.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917217|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_G06.
(338 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|B0F9L4|GOGC6_ARATH Golgin candidate 6 OS=Arabidopsis thaliana... 114 2e-25
sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus ... 32 0.76
sp|Q28256|GP1BA_CANFA Platelet glycoprotein Ib alpha chain OS=Ca... 32 0.76
sp|Q3KJP5|HSLO_PSEPF 33 kDa chaperonin OS=Pseudomonas fluorescen... 32 0.99
sp|Q9ZV88|BEH4_ARATH BES1/BZR1 homolog protein 4 OS=Arabidopsis ... 31 1.7
sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=... 31 2.2
sp|Q28EM8|LTMD1_XENTR LETM1 domain-containing protein 1 OS=Xenop... 30 2.9
sp|P39011|BEM4_YEAST Bud emergence protein 4 OS=Saccharomyces ce... 30 2.9
sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=... 30 3.8
sp|Q674R7|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapie... 30 3.8
sp|P0C1A9|PMEA_DICD3 Pectinesterase A OS=Dickeya dadantii (strai... 30 4.9
sp|P47047|MTR4_YEAST ATP-dependent RNA helicase DOB1 OS=Saccharo... 30 4.9
sp|Q9ZCF8|NUOI_RICPR NADH-quinone oxidoreductase subunit I OS=Ri... 29 6.4
sp|Q8VIG0|ZCH14_MOUSE Zinc finger CCHC domain-containing protein... 29 8.4
sp|Q8BU04|UBR7_MOUSE Putative E3 ubiquitin-protein ligase UBR7 O... 29 8.4
sp|Q8N806|UBR7_HUMAN Putative E3 ubiquitin-protein ligase UBR7 O... 29 8.4
sp|A1RJC1|OPGG_SHESW Glucans biosynthesis protein G OS=Shewanell... 29 8.4
sp|A4Y769|OPGG_SHEPC Glucans biosynthesis protein G OS=Shewanell... 29 8.4
sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=... 29 8.4
sp|Q7Z408|CSMD2_HUMAN CUB and sushi domain-containing protein 2 ... 29 8.4
sp|Q7V904|AROK_PROMM Shikimate kinase OS=Prochlorococcus marinus... 29 8.4

>sp|B0F9L4|GOGC6_ARATH Golgin candidate 6 OS=Arabidopsis thaliana
GN=GC6 PE=2 SV=2
Length = 914

Score = 114 bits (285), Expect = 2e-25
Identities = 56/111 (50%), Positives = 78/111 (70%)
Frame = -2

Query: 337 KDANAIANQTVLMQHNVLDHLLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEILGKR 158
KD+N +AN+TVL+Q +LD+LL L VE + V +RC + +CIGDLI GH +N +IL +
Sbjct: 303 KDSNKLANRTVLVQKKLLDYLLMLGVESQWAPVAVRCMTFKCIGDLIDGHPKNRDILASK 362

Query: 157 TVGEEPDGVPALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRILAS 5
+GE+ PALN++ R++L TS E +AA+YV K FCE N EGQ +LAS
Sbjct: 363 VLGEDRQVEPALNSILRIILQTSSIQEFVAADYVFKTFCEKNTEGQTMLAS 413


>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus
GN=Lamb2 PE=2 SV=1
Length = 1801

Score = 32.3 bits (72), Expect = 0.76
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1

Query: 326 CHCQPDGFNAAQCAGSSSQSFCR 258
C C PDG +A C G+S Q CR
Sbjct: 834 CQCSPDGALSALCEGTSGQCLCR 856


>sp|Q28256|GP1BA_CANFA Platelet glycoprotein Ib alpha chain OS=Canis
familiaris GN=GP1BA PE=2 SV=2
Length = 677

Score = 32.3 bits (72), Expect = 0.76
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Frame = +3

Query: 132 TPSGSSPTVLLPRISTFLA*PRIRSP------------IHLKDAQRMVTTGTLPSTERLR 275
TP+ + T++L +TFL P + SP +HL +A V GT S+ R
Sbjct: 494 TPTSPTTTLILSESNTFLGIPELTSPCTTSEYPIVPSLVHLPEAHE-VARGTSDSSRNHR 552

Query: 276 R*SSTLCCI 302
+ LCC+
Sbjct: 553 LFNPDLCCL 561


>sp|Q3KJP5|HSLO_PSEPF 33 kDa chaperonin OS=Pseudomonas fluorescens
(strain Pf0-1) GN=hslO PE=3 SV=1
Length = 300

Score = 32.0 bits (71), Expect = 0.99
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2

Query: 277 LLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEILGKRTVGE-EPDGVPALNAVP 110
+L EG +P++ I C+S R I L R HA +I T+G+ P+GV AL P
Sbjct: 69 ILQARSEGPIPLLMIECSSEREIRGLARYHAE--QIPADATLGDLMPNGVLALTVDP 123


>sp|Q9ZV88|BEH4_ARATH BES1/BZR1 homolog protein 4 OS=Arabidopsis
thaliana GN=BEH4 PE=1 SV=1
Length = 325

Score = 31.2 bits (69), Expect = 1.7
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3

Query: 36 PSQKHLITYSAAICSSLSDVSN---IKRGTAFSAGTPSGSSPTVLLPRIST 179
P KHL T S++ SS S + N I G+ + TP SSPT PR++T
Sbjct: 134 PWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNT 184


>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus
GN=Lamb2 PE=2 SV=1
Length = 1799

Score = 30.8 bits (68), Expect = 2.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1

Query: 326 CHCQPDGFNAAQCAGSSSQSFCR 258
C C PDG +A C G+S Q CR
Sbjct: 832 CQCSPDGALSALCEGTSGQCPCR 854


>sp|Q28EM8|LTMD1_XENTR LETM1 domain-containing protein 1 OS=Xenopus
tropicalis GN=letmd1 PE=2 SV=1
Length = 351

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2

Query: 146 LSYSSFAKNFHISCMTSNKISNTPQRRATNGDNWHSSLYRKIEKMIQ 286
L YS+F K F + + ++ QR G +H YR++EK+ Q
Sbjct: 74 LLYSTFMKGFRMLMTEAKEVGRIKQRMNHQGIPFHQLPYREMEKLRQ 120


>sp|P39011|BEM4_YEAST Bud emergence protein 4 OS=Saccharomyces
cerevisiae GN=BEM4 PE=1 SV=1
Length = 633

Score = 30.4 bits (67), Expect = 2.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Frame = -2

Query: 280 HLLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEIL----GKRTVGEEPDGVPALNAV 113
H ++S+ ++ I +RCI + I + N EIL GK+ + GV L+ +
Sbjct: 74 HDTSISINDKIAFYEISSEVIRCIANAIIDNDDNREILLDSGGKKLLNYYIGGVLQLDEI 133

Query: 112 PRLMLDTSDKDE-------QMAAEYVIKCFCEGN 32
+SDK E QM + +++ FC GN
Sbjct: 134 ------SSDKSEDSLVDKLQMRSVVLLRNFCIGN 161


>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens
GN=LAMB3 PE=1 SV=1
Length = 1172

Score = 30.0 bits (66), Expect = 3.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1

Query: 311 DGFNAAQCAGSSSQSFCRGKSASCHHSLRVFEVYWRSYSRSCKKCGNSWQ-KNCRR 147
+G +A +C + C G S +CH VF +Y C C + + KNC R
Sbjct: 306 EGQDAHEC----QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCER 357


>sp|Q674R7|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapiens
GN=ATG9B PE=2 SV=1
Length = 924

Score = 30.0 bits (66), Expect = 3.8
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = -1

Query: 323 HCQPDGFNAAQCAGSSSQSFCRGKSASCHHSLRVFEVYWRSYSRSCKKCGNSWQKNCRRG 144
H P +A Q S SQ GK+ + WR S K G+ W + +
Sbjct: 680 HGHPQWLSAGQTEASLSQRAEDGKTELSLMRFSLAHPLWRPPGHSSKFLGHLWGRVQQDA 739

Query: 143 ARWSASTKR 117
A W A++ R
Sbjct: 740 AAWGATSAR 748


tr_hit_id A9TYU0
Definition tr|A9TYU0|A9TYU0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 111
Score (bit) 135.0
E-value 1.0e-30
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917217|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_G06.
(338 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TYU0|A9TYU0_PHYPA Predicted protein OS=Physcomitrella paten... 135 1e-30
tr|B8BMB4|B8BMB4_ORYSI Putative uncharacterized protein OS=Oryza... 114 3e-24
tr|Q2QP84|Q2QP84_ORYSJ Os12g0538900 protein OS=Oryza sativa subs... 113 4e-24
tr|Q019A0|Q019A0_OSTTA Vesicle tethering family protein (ISS) OS... 49 2e-04
tr|A4RXK2|A4RXK2_OSTLU Predicted protein OS=Ostreococcus lucimar... 48 2e-04
tr|A3CI41|A3CI41_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.004
tr|Q4YTT8|Q4YTT8_PLABE Vacuolar sorting protein 35, putative (Fr... 40 0.058
tr|B4MAT4|B4MAT4_DROVI GJ15604 OS=Drosophila virilis GN=GJ15604 ... 36 0.84
tr|A2TIR8|A2TIR8_STRPU Receptor for egg jelly protein 9 OS=Stron... 35 2.5
tr|Q0UID8|Q0UID8_PHANO Putative uncharacterized protein OS=Phaeo... 34 4.2
tr|A6SKM4|A6SKM4_BOTFB Putative uncharacterized protein OS=Botry... 34 4.2
tr|B7QJI6|B7QJI6_IXOSC Acetyl-coenzyme A transporter, putative O... 33 5.5
tr|B3RTW8|B3RTW8_TRIAD Putative uncharacterized protein (Fragmen... 33 5.5
tr|Q5DBW7|Q5DBW7_SCHJA SJCHGC05468 protein OS=Schistosoma japoni... 33 7.2
tr|Q4D4G0|Q4D4G0_TRYCR Putative uncharacterized protein OS=Trypa... 33 7.2
tr|Q17L45|Q17L45_AEDAE Laminin alpha-1, 2 chain OS=Aedes aegypti... 33 7.2

>tr|A9TYU0|A9TYU0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_199606 PE=4 SV=1
Length = 917

Score = 135 bits (339), Expect = 1e-30
Identities = 65/111 (58%), Positives = 84/111 (75%)
Frame = -2

Query: 337 KDANAIANQTVLMQHNVLDHLLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEILGKR 158
KDAN +ANQT+L Q+ +LD LL LSVEGRV V IRC++LRCIGDL+ GH N +LG +
Sbjct: 290 KDANIVANQTLLAQNKLLDILLALSVEGRVSAVAIRCSALRCIGDLVVGHPANQVLLGSK 349

Query: 157 TVGEEPDGVPALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRILAS 5
+GEEPD PAL+ V R +L ++ E +AAEYV+KC+CEGN +GQ +LAS
Sbjct: 350 MIGEEPDAEPALHCVLRSLLKATNLSECIAAEYVVKCYCEGNSDGQTMLAS 400


>tr|B8BMB4|B8BMB4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38607 PE=4 SV=1
Length = 1051

Score = 114 bits (284), Expect = 3e-24
Identities = 57/111 (51%), Positives = 76/111 (68%)
Frame = -2

Query: 337 KDANAIANQTVLMQHNVLDHLLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEILGKR 158
KDAN NQT L Q N+LDHLL L VE + V +RC +LRCIG+L+ + +N++ L +
Sbjct: 441 KDANKTTNQTALAQKNILDHLLLLGVESQWAPVALRCMALRCIGNLVLRNPQNLDSLASK 500

Query: 157 TVGEEPDGVPALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRILAS 5
VGE+P PAL+A+ ++L TS E +AA+YV KCFCE NP GQ +LAS
Sbjct: 501 QVGEDPHVQPALSAIFSIILRTSVAQEFVAADYVFKCFCEKNPGGQALLAS 551


>tr|Q2QP84|Q2QP84_ORYSJ Os12g0538900 protein OS=Oryza sativa subsp.
japonica GN=Os12g0538900 PE=2 SV=1
Length = 929

Score = 113 bits (283), Expect = 4e-24
Identities = 57/111 (51%), Positives = 76/111 (68%)
Frame = -2

Query: 337 KDANAIANQTVLMQHNVLDHLLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEILGKR 158
KDAN NQT L Q N+LDHLL L VE + V +RC +LRCIG+L+ + +N++ L +
Sbjct: 319 KDANKTTNQTALAQKNILDHLLLLGVESQWAPVALRCMALRCIGNLVLRNPQNLDSLASK 378

Query: 157 TVGEEPDGVPALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRILAS 5
VGE+P PAL+A+ ++L TS E +AA+YV KCFCE NP GQ +LAS
Sbjct: 379 QVGEDPHVQPALSAIFSIILRTSLAQEFVAADYVFKCFCEKNPGGQALLAS 429


>tr|Q019A0|Q019A0_OSTTA Vesicle tethering family protein (ISS)
OS=Ostreococcus tauri GN=Ot05g02700 PE=4 SV=1
Length = 1594

Score = 48.5 bits (114), Expect = 2e-04
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = -2

Query: 331 ANAIANQTVLMQHNVLDHLLNLSV-EGRVPVVTIRCASLRCIGDLIRGHARNVEILGKRT 155
A ANQ+ L + ++ L+ S+ + V V++R A+LR + L+R H N L T
Sbjct: 566 AGCRANQSELAKTGTVEILVRASLGDSAVNAVSVRVAALRALAALVRNHEENQTELFSAT 625

Query: 154 VGEEPDGV-PALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRILAS 5
PAL A R L + E+ AA V+ GNP+GQ +L S
Sbjct: 626 ADRAGTVTEPALLACGRTALHSLSPAERAAASSVLGASMRGNPDGQLLLVS 676


>tr|A4RXK2|A4RXK2_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_38525 PE=4 SV=1
Length = 927

Score = 48.1 bits (113), Expect = 2e-04
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -2

Query: 319 ANQTVLMQHNVLDHLLNLSV-EGRVPVVTIRCASLRCIGDLIRGHARNVEILGKRTVGEE 143
ANQ+ L +H ++ L+ ++ + V V++R A+LR + L+R H N L T
Sbjct: 330 ANQSELAKHGTVEILVRAALGDSAVNAVSVRVAALRALAALVRDHEGNQTALFSATADRA 389

Query: 142 PDGV-PALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRILAS 5
PAL + R L + E+ AA V+ GNP+GQ +L S
Sbjct: 390 GTVTEPALLSCGRAALHSESPAERSAAILVLGAAMLGNPDGQLLLVS 436


>tr|A3CI41|A3CI41_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_034963 PE=4 SV=1
Length = 829

Score = 43.9 bits (102), Expect = 0.004
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -2

Query: 337 KDANAIANQTVLMQHNVLDHLLNLSVEGRVPVVTIRC 227
KDAN NQT L Q N+LDHLL L VE + V +RC
Sbjct: 281 KDANKTTNQTALAQKNILDHLLLLGVESQWAPVALRC 317


>tr|Q4YTT8|Q4YTT8_PLABE Vacuolar sorting protein 35, putative
(Fragment) OS=Plasmodium berghei GN=PB001171.02.0 PE=4
SV=1
Length = 650

Score = 40.0 bits (92), Expect = 0.058
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2

Query: 56 NIFSSHLFIFIRRVQHQTRNSV*CWHSIWLLSYSSFAKNFHISCMTSNKISNTPQRRATN 235
N+F +HL I++ R Q RN C+++ S+ +F KN +I+ + +N I+ + N
Sbjct: 341 NLFYNHLVIYVNRTIEQCRNEFDCFNNTLDTSFHNFDKNNNINNVHTNSININDEVSNLN 400

Query: 236 GDNWHSSLYRKIEKMIQHIVLH*NRLVGN 322
N + I K +H N + N
Sbjct: 401 QSNKDIDASQNIPKFSNQNNIHKNSIGNN 429


>tr|B4MAT4|B4MAT4_DROVI GJ15604 OS=Drosophila virilis GN=GJ15604
PE=4 SV=1
Length = 839

Score = 36.2 bits (82), Expect = 0.84
Identities = 24/103 (23%), Positives = 48/103 (46%)
Frame = -2

Query: 319 ANQTVLMQHNVLDHLLNLSVEGRVPVVTIRCASLRCIGDLIRGHARNVEILGKRTVGEEP 140
A Q V+ + +L L ++ + VP I ++ + +++RG N + LG+ T +P
Sbjct: 311 ACQRVMQKSQLLKALCDILMGSGVPA-DILTETINAVAEVVRGDRDNQDELGRLTAPSQP 369

Query: 139 DGVPALNAVPRLMLDTSDKDEQMAAEYVIKCFCEGNPEGQRIL 11
+ + ++ + + + A Y +CF N +GQR L
Sbjct: 370 PRPAIVVLLMSMINEKRIQSLRCAVLYCFQCFLYRNVDGQRAL 412


>tr|A2TIR8|A2TIR8_STRPU Receptor for egg jelly protein 9
OS=Strongylocentrotus purpuratus PE=2 SV=1
Length = 2965

Score = 34.7 bits (78), Expect = 2.5
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = -1

Query: 302 NAAQCAGSSSQSFCRGKSASCHHSLRVFEVYWRSYSRSCKKCGNSWQKNCRRGARWSAST 123
+++ + SSS S +S+S S + W S SRS +SW + R + WS+S+
Sbjct: 596 SSSSSSSSSSSSSSSSRSSSSWSSSSLSSSSWSSSSRS----SSSWSSSSRSSSSWSSSS 651

Query: 122 KRCSSF 105
+ SS+
Sbjct: 652 RSSSSW 657


>tr|Q0UID8|Q0UID8_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_08476 PE=3 SV=1
Length = 934

Score = 33.9 bits (76), Expect = 4.2
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -1

Query: 320 CQPDGFNAAQCAGSSSQSFC---RGKSASCHHSLRVFEVYWRSYSRSCKKCGNSWQKNC 153
C P G N C SSSQ C K+ +C + V SY+++CKK G ++Q C
Sbjct: 228 CGPKGVNNFCCPASSSQPSCGWYTQKNGNCDSTCPKDMVEIGSYNKNCKKAG-TYQSAC 285