BP917218 |
Clone id |
YMU001_000097_G07 |
Library |
YMU01 |
Length |
460 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000097_G07. |
Accession |
BP917218 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3867Contig1 |
Sequence |
GCAGAATTTTGACGCTTTAAAGTTACATTTTCACAGAACCATGAACAGGCCCTACTTTGT GTATACATTGCAAACCATTGGGACCGCAATTTCGGTCCCTTTCAAGCAATGCTGAAATAA TCGGTTACGTTATGCAACCTTTAATCTGTTCACACTAAGCCACTTCCTGAAGGCCATCAT CACAACCCATGTCCCCTTTGAAGTCTTCTCCTTGATCATTAGCATGAGGGCAGCACTCAA AACAGTTTTCAGTATTTGAGCTTCCAAGCCTTTGTAGAACCCTAAAGCCCCTTCTCTGTG CCAAATGATATTGATAGCATCTAGCATTTTCTTCGGAGGCCTATGCAAGGGATCTGTGAT GCTTTTTTGTTCGGTCTCATCGTCTTTCCGCTCCCAAACTTGTAATAGTACCTTACACCT TATGGCGGGATATGTCACGACAGTAGCCACTGTTTTGGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O70579 |
Definition |
sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus musculus |
Align length |
97 |
Score (bit) |
54.3 |
E-value |
2.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P2K8 |
Definition |
tr|A9P2K8|A9P2K8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
109 |
Score (bit) |
123.0 |
E-value |
5.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917218|Adiantum capillus-veneris mRNA, clone: YMU001_000097_G07. (460 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P2K8|A9P2K8_PICSI Putative uncharacterized protein OS=Picea... 123 5e-27 tr|A7NWI2|A7NWI2_VITVI Chromosome chr5 scaffold_2, whole genome ... 122 7e-27 tr|B4FBM4|B4FBM4_MAIZE Putative uncharacterized protein OS=Zea m... 113 5e-24 tr|B6T9S9|B6T9S9_MAIZE Peroxisomal carrier protein OS=Zea mays P... 112 9e-24 tr|A9SG53|A9SG53_PHYPA Predicted protein OS=Physcomitrella paten... 111 2e-23 tr|B6TAM1|B6TAM1_MAIZE Peroxisomal carrier protein OS=Zea mays P... 110 3e-23 tr|B4F8I7|B4F8I7_MAIZE Putative uncharacterized protein OS=Zea m... 110 3e-23 tr|Q60ER7|Q60ER7_ORYSJ Os05g0392700 protein OS=Oryza sativa subs... 110 5e-23 tr|A9RQJ2|A9RQJ2_PHYPA Predicted protein OS=Physcomitrella paten... 110 5e-23 tr|A2Y4C0|A2Y4C0_ORYSI Putative uncharacterized protein OS=Oryza... 109 8e-23 tr|A2Y4B7|A2Y4B7_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|Q9MA90|Q9MA90_ARATH T12H1.26 protein (At3g05290/T12H1_26) OS=... 107 3e-22 tr|Q8L9D8|Q8L9D8_ARATH Putative uncharacterized protein OS=Arabi... 107 3e-22 tr|A7PSB5|A7PSB5_VITVI Chromosome chr14 scaffold_27, whole genom... 107 4e-22 tr|A5BLA4|A5BLA4_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22 tr|A6YTC9|A6YTC9_CUCME Mitochondrial FAD carrier OS=Cucumis melo... 106 5e-22 tr|B6ZJZ9|B6ZJZ9_SOYBN Peroxisomal adenine nucleotide carrier 1 ... 103 3e-21 tr|A9SL66|A9SL66_PHYPA Predicted protein OS=Physcomitrella paten... 103 6e-21 tr|Q8VZS0|Q8VZS0_ARATH Putative uncharacterized protein At5g2752... 101 2e-20 tr|A9SJW2|A9SJW2_PHYPA Predicted protein OS=Physcomitrella paten... 100 3e-20 tr|B0DA91|B0DA91_LACBS Predicted protein OS=Laccaria bicolor (st... 74 3e-12 tr|A7QW20|A7QW20_VITVI Chromosome undetermined scaffold_197, who... 70 5e-11 tr|B8PLC5|B8PLC5_9APHY Predicted protein OS=Postia placenta Mad-... 70 7e-11 tr|Q01GI9|Q01GI9_OSTTA Mitochondrial FAD carrier protein (ISS) O... 68 3e-10 tr|A8NT88|A8NT88_COPC7 Putative uncharacterized protein OS=Copri... 67 4e-10 tr|A4RR11|A4RR11_OSTLU MC family transporter: peroxisomal membra... 63 6e-09 tr|B7GCU2|B7GCU2_PHATR Predicted protein OS=Phaeodactylum tricor... 61 2e-08 tr|Q84QA9|Q84QA9_ORYSJ Os03g0265300 protein OS=Oryza sativa subs... 56 1e-06 tr|A2XEU9|A2XEU9_ORYSI Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|Q76P23|Q76P23_DICDI Putative uncharacterized protein (Transme... 56 1e-06
>tr|A9P2K8|A9P2K8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 327
Score = 123 bits (308), Expect = 5e-27 Identities = 63/109 (57%), Positives = 81/109 (74%), Gaps = 1/109 (0%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWER-KDDETEQKSITDPLHRPPKKMLDAINIIWHREGAL 283 SKT+ATV+TYPAIRCKV++Q E KDD + +PP+ ++DA+ IIW EGAL Sbjct: 218 SKTMATVLTYPAIRCKVMIQAAEPDKDDRLIMNG--ENRDKPPRHIIDALRIIWKNEGAL 275
Query: 282 GFYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 GFYKG+ AQILKTVLSAAL+LMIKEKTS+ TWVVM+ R ++ + K+ Sbjct: 276 GFYKGVHAQILKTVLSAALLLMIKEKTSRSTWVVMVGLRSYILAAKQKI 324
>tr|A7NWI2|A7NWI2_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019931001 PE=3 SV=1 Length = 302
Score = 122 bits (307), Expect = 7e-27 Identities = 62/108 (57%), Positives = 82/108 (75%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQKSITDPLHRPPKKMLDAINIIWHREGALG 280 SK +AT VTYPAIRCKV+LQ E +D T +++ +P K + D I IW REG LG Sbjct: 198 SKCIATTVTYPAIRCKVMLQAAESDEDGTTKEA------QPRKTVSDTIYSIWKREGLLG 251
Query: 279 FYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 F+KGLEAQILKTVLS+AL+LMIKEK +K TWV+++A R++L+VNR ++ Sbjct: 252 FFKGLEAQILKTVLSSALLLMIKEKITKTTWVILLALRRYLTVNRTRL 299
>tr|B4FBM4|B4FBM4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 335
Score = 113 bits (282), Expect = 5e-24 Identities = 56/108 (51%), Positives = 80/108 (74%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQKSITDPLHRPPKKMLDAINIIWHREGALG 280 SK++ATV+TYP IRCKV++Q + +D+ ++ R PK ML A++ IW +EG G Sbjct: 224 SKSIATVLTYPLIRCKVMIQAADPDEDDDDEPGRPSK-SRTPKTMLGALHAIWSKEGIPG 282
Query: 279 FYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 F+KGL AQILKTVLS+AL+LMIKEK SK TWV ++A R++L V++ ++ Sbjct: 283 FFKGLNAQILKTVLSSALLLMIKEKISKFTWVSLLALRRYLFVSQKRI 330
>tr|B6T9S9|B6T9S9_MAIZE Peroxisomal carrier protein OS=Zea mays PE=2 SV=1 Length = 335
Score = 112 bits (280), Expect = 9e-24 Identities = 56/108 (51%), Positives = 80/108 (74%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQKSITDPLHRPPKKMLDAINIIWHREGALG 280 SK++ATV+TYP IRCKV++Q + +D+ ++ R PK ML A++ IW +EG G Sbjct: 224 SKSIATVLTYPLIRCKVMIQAADPDEDDDDEPGRPSK-SRIPKTMLGALHAIWSKEGIPG 282
Query: 279 FYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 F+KGL AQILKTVLS+AL+LMIKEK SK TWV ++A R++L V++ ++ Sbjct: 283 FFKGLNAQILKTVLSSALLLMIKEKISKFTWVSLLALRRYLFVSQKRI 330
>tr|A9SG53|A9SG53_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_211988 PE=3 SV=1 Length = 356
Score = 111 bits (277), Expect = 2e-23 Identities = 60/112 (53%), Positives = 81/112 (72%), Gaps = 5/112 (4%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQ--KSITD-PLHRPPKKMLDAINIIWHREG 289 SKT+ATV+TYPAIR KV+LQ E +D+ + S T+ + R + M++A + IW EG Sbjct: 221 SKTIATVITYPAIRAKVMLQAAESDEDKVLRLNSSTTNLKVRRRARSMVEAFHQIWAEEG 280
Query: 288 ALGFYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWL--SVNRLK 139 G++KGL AQI+KTVLSAALMLMIKEK ++ TWVVM+A ++WL N+LK Sbjct: 281 LKGYFKGLNAQIVKTVLSAALMLMIKEKVARSTWVVMLAIQRWLLAGENKLK 332
>tr|B6TAM1|B6TAM1_MAIZE Peroxisomal carrier protein OS=Zea mays PE=2 SV=1 Length = 336
Score = 110 bits (276), Expect = 3e-23 Identities = 58/111 (52%), Positives = 82/111 (73%), Gaps = 3/111 (2%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERK---DDETEQKSITDPLHRPPKKMLDAINIIWHREG 289 SK++ATV+TYP IRCKV++Q + DD++E+ S + R PK ML A++ IW +EG Sbjct: 225 SKSIATVLTYPLIRCKVMIQAADPDKDDDDDSERPSKS----RTPKTMLGALHAIWSKEG 280
Query: 288 ALGFYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 GF+KGL AQILK VLS+AL+LMIKEK SK TWV ++A R++L V++ ++ Sbjct: 281 IPGFFKGLNAQILKAVLSSALLLMIKEKISKFTWVSLLALRRYLFVSQKRI 331
>tr|B4F8I7|B4F8I7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 335
Score = 110 bits (276), Expect = 3e-23 Identities = 56/108 (51%), Positives = 79/108 (73%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQKSITDPLHRPPKKMLDAINIIWHREGALG 280 SK++ATV+TYP IRCKV++Q + D++ + S R PK ML A++ IW +EG G Sbjct: 224 SKSIATVLTYPLIRCKVMIQAAD-PDEDDDVDSERPSKSRTPKTMLGALHAIWSKEGIPG 282
Query: 279 FYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 F+KGL AQILK VLS+AL+LMIKEK SK TWV ++A R++L V++ ++ Sbjct: 283 FFKGLNAQILKAVLSSALLLMIKEKISKFTWVSLLALRRYLFVSQKRI 330
>tr|Q60ER7|Q60ER7_ORYSJ Os05g0392700 protein OS=Oryza sativa subsp. japonica GN=OJ1764_D01.15 PE=2 SV=1 Length = 330
Score = 110 bits (274), Expect = 5e-23 Identities = 53/108 (49%), Positives = 81/108 (75%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQKSITDPLHRPPKKMLDAINIIWHREGALG 280 SK+VAT++TYP IRCKV++Q + D++ + +S + PK ML A++ +W +EG G Sbjct: 221 SKSVATILTYPLIRCKVMIQAAD-PDEDDDDESERPGKSKSPKTMLGALHAMWSKEGIPG 279
Query: 279 FYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 F+KGL AQILKTVLS+AL+LMIKEK S+ TW+ ++A R++L V++ ++ Sbjct: 280 FFKGLHAQILKTVLSSALLLMIKEKISRFTWISLLALRRYLFVSQKRI 327
>tr|A9RQJ2|A9RQJ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204760 PE=3 SV=1 Length = 356
Score = 110 bits (274), Expect = 5e-23 Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 3/104 (2%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQ---KSITDPLHRPPKKMLDAINIIWHREG 289 SKT+AT++TYPAIR KV+LQ E ++D+ + + + HR + MLD I EG Sbjct: 221 SKTIATILTYPAIRAKVMLQAAESEEDKATRLNGEPDCNARHRA-RNMLDTFKQIGQEEG 279
Query: 288 ALGFYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWL 157 G++KGL AQI+KTVLSAALMLMIKEK + TW+VMMAFRKWL Sbjct: 280 VKGYFKGLHAQIVKTVLSAALMLMIKEKVATSTWIVMMAFRKWL 323
>tr|A2Y4C0|A2Y4C0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19846 PE=3 SV=1 Length = 330
Score = 109 bits (272), Expect = 8e-23 Identities = 52/108 (48%), Positives = 81/108 (75%) Frame = -2
Query: 459 SKTVATVVTYPAIRCKVLLQVWERKDDETEQKSITDPLHRPPKKMLDAINIIWHREGALG 280 SK+VAT++TYP IRCKV++Q + D++ + +S + PK ML A++ +W +EG G Sbjct: 221 SKSVATILTYPLIRCKVMIQAAD-PDEDDDDESERPGKSKSPKTMLGALHAMWSKEGIPG 279
Query: 279 FYKGLEAQILKTVLSAALMLMIKEKTSKGTWVVMMAFRKWLSVNRLKV 136 F+KGL AQILKTVLS+AL+LMIKEK S+ TW+ ++A R+++ V++ ++ Sbjct: 280 FFKGLHAQILKTVLSSALLLMIKEKISRFTWISLLALRRYIFVSQKRI 327
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