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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917223
Clone id YMU001_000097_H03
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000097_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TACGGGTGGTAATAACAAACATAAAGCAGATGTTCTGGACGACTTTGTAACCCGTTTCCC
TCATCAGGCACACGTCGAGTGCAAGCCCAATGATACATCATTTATTTCACTTAGTCGACC
TGATGTTATCCAATTTGATATTTACAAGGACGACCTTCAACCACCAAGTAATTGAGCAAG
TAATAAGCCATCAGAACTGTAAACACAACCAGATAGTTAGCTCTGCAAGCTACTCCAACC
ATACCCTTGCCTACTATTCGAAAGCGTGTATTGATCATAAGGCATCTCAGAATGGCCCAG
TCTGTCTGAAGGCAAACCTACATTGTAATTTTCAACGCCTGGACCCAGACCAAGCCCAGA
AATTCCAAGCCCCGGTTTTCTTTCCTGGATCATTTGATGCTGATATGGATTGACTCCTGC
AATCCCCTGAGATCCTTGAACATGGTTTCCTGGAAACCATCTGTCTGCCAGAGGGCTGAT
CCTTGGACCAGTGATTCTGGGATCAGGCATGCATTGAC
■■Homology search results ■■ -
sp_hit_id A2AKY4
Definition sp|A2AKY4|Z804A_MOUSE Zinc finger protein 804A OS=Mus musculus
Align length 52
Score (bit) 31.2
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917223|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_H03.
         (518 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2AKY4|Z804A_MOUSE Zinc finger protein 804A OS=Mus musculus G...    31   3.0  
sp|Q89330|POLG_ZYMVR Genome polyprotein OS=Zucchini yellow mosai...    31   3.0  
sp|Q3IHD5|Y1813_PSEHT Maf-like protein PSHAa1813 OS=Pseudoaltero...    30   5.2  
sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL...    30   6.8  
sp|O31503|YEFA_BACSU Uncharacterized RNA methyltransferase yefA ...    30   8.8  
sp|Q9H210|OR2D2_HUMAN Olfactory receptor 2D2 OS=Homo sapiens GN=...    30   8.8  
sp|A8G2Q0|GLMM_PROM2 Phosphoglucosamine mutase OS=Prochlorococcu...    30   8.8  

>sp|A2AKY4|Z804A_MOUSE Zinc finger protein 804A OS=Mus musculus
           GN=Znf804a PE=2 SV=1
          Length = 1200

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = +2

Query: 107 SLSRPDVIQFDIYKDDLQPPSN*ASNKPSEL*TQPDS*LCKLLQPYPCLLFE 262
           SLS+PD +  D  K+D+ P  N +  K SE   Q +  +  +L PY  LL E
Sbjct: 832 SLSQPDELAKDCIKEDINPQENVSIEKNSEQTEQTE--IKGMLHPYNPLLSE 881


>sp|Q89330|POLG_ZYMVR Genome polyprotein OS=Zucchini yellow mosaic
            virus (strain Reunion Island) PE=3 SV=1
          Length = 3083

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +3

Query: 33   FWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCKH 206
            F+TT     LIRH  S  P+IH       L  S ++  +    HQ + Q ++  + +H
Sbjct: 1592 FFTT----HLIRHDGSMHPLIHEELKQFKLRDSEMVLNKVALPHQFVSQWMTQGDYEH 1645


>sp|Q3IHD5|Y1813_PSEHT Maf-like protein PSHAa1813
           OS=Pseudoalteromonas haloplanktis (strain TAC 125)
           GN=PSHAa1813 PE=3 SV=1
          Length = 202

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
 Frame = +3

Query: 174 EQVISHQNCKHNQIVSSASYSNHTLAYYSKACIDHKASQNGPVCLKANLHCNFQRLDPDQ 353
           EQ++   + KHN +   + +S H++ + +  C+    S     C++   +  F+ L   Q
Sbjct: 77  EQILGKPHNKHNAVKQLSLFSGHSVTFLTGLCVYDLTSGESKTCIEP-FNVTFKTLTDAQ 135

Query: 354 AQKF---QAPVFFPGSFDAD 404
              +   + P    GSF ++
Sbjct: 136 ISAYCDAEQPYNCAGSFKSE 155


>sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1
            PE=1 SV=2
          Length = 3027

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 123  MLSNLIFTRTTFNHQVIEQVISHQNCKHNQIVSSASYSNHTLAYYSKACI 272
            +++N +   +   H ++  +I+  +  H  I S+  Y  HTLA    ACI
Sbjct: 2193 VVANPLLHLSNLTHDILHAIINFDSPPHPDIQSNKVYVMHTLAASLSACI 2242


>sp|O31503|YEFA_BACSU Uncharacterized RNA methyltransferase yefA
           OS=Bacillus subtilis GN=yefA PE=3 SV=1
          Length = 459

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 20  HKADVLDDFVTRFPHQAHV--ECKPNDTSFISLSRPDVIQFDIYKDDL 157
           HKA +++D   +FPH   +     PN T+ I  +  +VI  + Y  DL
Sbjct: 228 HKAKIIEDITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDL 275


>sp|Q9H210|OR2D2_HUMAN Olfactory receptor 2D2 OS=Homo sapiens
           GN=OR2D2 PE=2 SV=4
          Length = 308

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 406 WIDSCNPLRSLNMVSWKPSVCQRADPWTS 492
           ++  CNPLR  N+++WK  V      WTS
Sbjct: 123 YVAICNPLRYPNIMTWKVCVQLATGSWTS 151


>sp|A8G2Q0|GLMM_PROM2 Phosphoglucosamine mutase OS=Prochlorococcus
           marinus (strain MIT 9215) GN=glmM PE=3 SV=1
          Length = 450

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 DHKASQNGPVCLKANLHCNFQRLDPDQAQKFQAPVFFPGSFDADMD 410
           D K   N    LK N++C    L+P +    ++P     SFD D D
Sbjct: 195 DVKVINNSKNGLKINMNCGSTNLEPLKKALIESPAHMGFSFDGDAD 240
tr_hit_id Q9KLZ5
Definition tr|Q9KLZ5|Q9KLZ5_VIBCH Putative uncharacterized protein OS=Vibrio cholerae
Align length 75
Score (bit) 33.9
E-value 5.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917223|Adiantum capillus-veneris mRNA, clone:
YMU001_000097_H03.
         (518 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9KLZ5|Q9KLZ5_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A5F061|A5F061_VIBC3 Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A6Y630|A6Y630_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A6ABJ0|A6ABJ0_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A3GM43|A3GM43_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A3EM76|A3EM76_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A3EAC1|A3EAC1_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A2PIN5|A2PIN5_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A1F5V4|A1F5V4_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A1EHS3|A1EHS3_VIBCH Putative uncharacterized protein OS=Vibri...    34   5.0  
tr|A5ZYY0|A5ZYY0_VIBCH Putative uncharacterized protein OS=Vibri...    33   6.5  

>tr|Q9KLZ5|Q9KLZ5_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae GN=VC_A0595 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A5F061|A5F061_VIBC3 Putative uncharacterized protein OS=Vibrio
           cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 /
           O395) GN=VC0395_0539 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A6Y630|A6Y630_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae RC385 GN=VCRC385_B0095 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVKSTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A6ABJ0|A6ABJ0_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae 623-39 GN=A59_1503 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH+   
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVKSTVY-------QIQHGQVSHEQVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H+Q+  S + ++ T+
Sbjct: 263 HDQVNHSLAVNHSTM 277


>tr|A3GM43|A3GM43_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae NCTC 8457 GN=A5C_A0776 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A3EM76|A3EM76_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae V51 GN=VCV51_A0448 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH+   
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVKSTVY-------QIQHGQVSHEQVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H+Q+  S + ++ T+
Sbjct: 263 HDQVNHSLAVNHSTM 277


>tr|A3EAC1|A3EAC1_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae MO10 GN=VCMO10_A0819 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A2PIN5|A2PIN5_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae MAK 757 GN=A53_A0633 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A1F5V4|A1F5V4_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae 2740-80 GN=VC274080_A0643 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277


>tr|A1EHS3|A1EHS3_VIBCH Putative uncharacterized protein OS=Vibrio
           cholerae V52 GN=VCV52_A0551 PE=4 SV=1
          Length = 317

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 15/75 (20%), Positives = 38/75 (50%)
 Frame = +3

Query: 24  KQMFWTTL*PVSLIRHTSSASPMIHHLFHLVDLMLSNLIFTRTTFNHQVIEQVISHQNCK 203
           +Q +W     ++ +RHT S  P +  L  +++ ++ + ++       Q+    +SH++  
Sbjct: 210 QQPYWIAQKAIAELRHTMSEEPRLLSLLDVIETVVESTVY-------QIQHGQVSHEHVN 262

Query: 204 HNQIVSSASYSNHTL 248
           H Q+  S + ++ T+
Sbjct: 263 HEQVNHSLAVNHSTM 277