BP917230
Clone id YMU001_000098_A02
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCATGGCCTTTTATTTCGTAATCAGGCAGAGCATTAAGTTGCATTACATCACAAAGCAA
CCACCTTTGCATGTCCTTCACGTGCAATTGACCAGTACATACATGACAACAAACATCAGA
AGATTTGACATAACTTCTGCACAATTTGAGCTTTTCCAGCCGAGGCATCCATTGCATGCG
GATCAATCATCTGGAAAATAATCAGCACTCTTCTTGATAGAGCCTCCTCTTTGCAAACCA
ACTCAAAGTTGCAAAACTTTCACACTTTTGAAAGCAACGCGCTCCTAATTCAGTGCACTG
AACCTTGATTCTCTGCATTGAGCAAAATCTGTGGACCAGTAATTGTACAAAGCGTCAACA
GACTCCTAACAACAAAAAGAAAAGAGCTGACTGCCATTGGAAACGGAGCTCTTATCCCTT
CCCTTCTGACACCTTACCAACCAAGCTCTGCGAGTGCTCACAGTAAAATCCAAGCCCCTG
CAAAAAGCAGAGGCTCTGA
■■Homology search results ■■ -
sp_hit_id Q3BAH3
Definition sp|Q3BAH3|YCF2_PHAAO Protein ycf2 OS=Phalaenopsis aphrodite subsp. formosana
Align length 67
Score (bit) 31.6
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917230|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_A02.
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3BAH3|YCF2_PHAAO Protein ycf2 OS=Phalaenopsis aphrodite subs... 32 2.1

>sp|Q3BAH3|YCF2_PHAAO Protein ycf2 OS=Phalaenopsis aphrodite subsp.
formosana GN=ycf2-A PE=3 SV=1
Length = 2290

Score = 31.6 bits (70), Expect = 2.1
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Frame = +1

Query: 100 YMTTNIRRFDITSAQFELFQPR----------HPLHADQSSGK*SALFLIEPPLCKPTQS 249
YMTT I RFDIT QFEL + H LH ++S+ +L L+E L + +
Sbjct: 1711 YMTTKIDRFDIT-LQFELAKAMSPCIIWIPNIHDLHVNESNY--LSLDLLENYLSRDCER 1767

Query: 250 CKTFTLL 270
C T +L
Sbjct: 1768 CSTGKIL 1774


tr_hit_id B6AEP9
Definition tr|B6AEP9|B6AEP9_9CRYT Putative uncharacterized protein OS=Cryptosporidium muris RN66
Align length 75
Score (bit) 36.2
E-value 0.88
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917230|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_A02.
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6AEP9|B6AEP9_9CRYT Putative uncharacterized protein OS=Crypt... 36 0.88
tr|Q5CL24|Q5CL24_CRYHO Putative uncharacterized protein OS=Crypt... 35 2.6
tr|A8ZSI1|A8ZSI1_DESOH Putative uncharacterized protein OS=Desul... 33 5.7
tr|B5DHW3|B5DHW3_DROPS GA27723 OS=Drosophila pseudoobscura pseud... 33 7.4
tr|B5DHW2|B5DHW2_DROPS GA27744 OS=Drosophila pseudoobscura pseud... 33 7.4
tr|A6C3I6|A6C3I6_9PLAN Putative uncharacterized protein OS=Planc... 33 9.7

>tr|B6AEP9|B6AEP9_9CRYT Putative uncharacterized protein
OS=Cryptosporidium muris RN66 GN=CMU_013410 PE=4 SV=1
Length = 270

Score = 36.2 bits (82), Expect = 0.88
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -2

Query: 297 CTELGARCFQKCESFATLSWFAKRRLYQEEC*LFSR*LIRMQWMPRLEKLKLCRSY--VK 124
C+E +RC ++CE F LS A I + +PR E K C+ Y K
Sbjct: 75 CSECYSRCGRQCEDFLWLSLEA----------------INFRMLPRAESQKECKLYNGKK 118

Query: 123 SSDVCCHVCTGQLHV 79
S+ + C+ G+ HV
Sbjct: 119 STRILCYTTAGRRHV 133


>tr|Q5CL24|Q5CL24_CRYHO Putative uncharacterized protein
OS=Cryptosporidium hominis GN=Chro.20156 PE=4 SV=1
Length = 264

Score = 34.7 bits (78), Expect = 2.6
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -2

Query: 297 CTELGARCFQKCESFATLSWFAKRRLYQEEC*LFSR*LIRMQWMPRLEKLKLCR--SYVK 124
C+E +RC ++CE F LS A + + +PR E K C+ S K
Sbjct: 77 CSECYSRCGRQCEDFLWLSLEA----------------VNFRMLPRAESQKECKLPSGKK 120

Query: 123 SSDVCCHVCTGQLHVKDMQRWLLCDVMQLNALPDYE 16
SS + C G+ H+ ++ + + M ++ D E
Sbjct: 121 SSRILCFTTAGRRHIDPTEQ--MIETMSISNPEDIE 154


>tr|A8ZSI1|A8ZSI1_DESOH Putative uncharacterized protein
OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3)
GN=Dole_1914 PE=4 SV=1
Length = 58

Score = 33.5 bits (75), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2

Query: 114 VCCHVCTGQLHVKDMQRWLLCDVMQLNALPDYEIK 10
+ C C G +H D + WL+CD +L YEI+
Sbjct: 11 LACPKCKGDIHTDDAENWLICDACRLK----YEIR 41


>tr|B5DHW3|B5DHW3_DROPS GA27723 OS=Drosophila pseudoobscura
pseudoobscura GN=GA27723 PE=4 SV=1
Length = 169

Score = 33.1 bits (74), Expect = 7.4
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2

Query: 308 ILCIEQNLWTSNCTKRQQTPNNKKKRADCHWKRSSYPFPSDTLPTKL-CECSQ*NPSPCK 484
+LC EQ+ S + ++ +C W R S P + + P K CE + S CK
Sbjct: 71 LLCTEQDAIASTTASAVVSTDSSLDEEECFWTRKSEPSCAKSKPKKASCEKRRRKKSACK 130

Query: 485 KQR 493
K++
Sbjct: 131 KRK 133


>tr|B5DHW2|B5DHW2_DROPS GA27744 OS=Drosophila pseudoobscura
pseudoobscura GN=GA27744 PE=4 SV=1
Length = 162

Score = 33.1 bits (74), Expect = 7.4
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2

Query: 308 ILCIEQNLWTSNCTKRQQTPNNKKKRADCHWKRSSYPFPSDTLPTKL-CECSQ*NPSPCK 484
+LC EQ+ S + ++ +C W R S P + + P K CE + S CK
Sbjct: 64 LLCTEQDAIASTTASAVVSTDSSLDEEECFWTRKSEPSCAKSKPKKASCEKRRRKKSACK 123

Query: 485 KQR 493
K++
Sbjct: 124 KRK 126


>tr|A6C3I6|A6C3I6_9PLAN Putative uncharacterized protein
OS=Planctomyces maris DSM 8797 GN=PM8797T_26475 PE=4
SV=1
Length = 315

Score = 32.7 bits (73), Expect = 9.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2

Query: 159 LEKLKLCRSYVKSSDVCCHVCTGQLHV-KDMQRWLLCDVMQLNALPDYEIKGH 4
LEKL C + ++ + HV +D Q WLLC ++ L P Y I G+
Sbjct: 34 LEKLSWCIETAREQNLLSVLLGDLFHVPRDNQNWLLCQLLNLFETPVYGIYGN 86