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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917231
Clone id YMU001_000098_A03
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCGAGGACAAGCGCAGGAGTAAGAGCTGTTGTTTCTATGCATCGATTGGGCGGCTGGCTC
CAATTATTCACTCTTATATTAACTCTAATGAAGGATCATCCGATTTCTAAGGTATACAGA
CCTGCATGCCTTAGAGGCCATGTATTATGTATGGGCCTATCATTGTCTAGGCTTCTCTGT
CTAGGGTTGGCATTGTAGGGGTTTGTTTTGTCGCATCTACAGGAAGGATAGATCGATGGC
AAGTATTTTGCCCACAATTTTCCATCTACACCTGTAGACTGCACTTATATGAAACACGAC
AGACTTTATTTGTTGGGTTGGGCATGAAATACCCAACCTTGGAAACGTCTAAAGACTTGT
TCCACTTTAACCATGGTGCTTAAATACCCTTTTGTAGATTGTAATACGCCTTTTGTCAGG
CATGATTGGTGCCCATTCATTGCTGTGTAAATCCGTGCGATTTTGCCACTGGTAGTAAAA
GTTGA
■■Homology search results ■■ -
sp_hit_id O80899
Definition sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arabidopsis thaliana
Align length 49
Score (bit) 31.6
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917231|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_A03.
         (485 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arab...    32   2.0  
sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4 O...    30   5.7  

>sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2
           OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1
          Length = 757

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 122 LHALEAMYYVWAYHCLGFSV*GWHCRGLFCRIYRKDRSMASILPTIFHL 268
           L  +  +Y +W + CLG S+  W+    F RI      + SI   I  L
Sbjct: 576 LAGMHCLYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKL 624


>sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4
           OS=Homo sapiens GN=ABCC4 PE=1 SV=3
          Length = 1325

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +1

Query: 4   RTSAGVRAVVSMHRLGGWLQLFTLILTLMKDHPISKVYRPACLRG 138
           RT   V   + + ++  W + F+ ++T ++   ISK+ R +CLRG
Sbjct: 274 RTMNEVITGIRIIKMYAWEKSFSNLITNLRKKEISKILRSSCLRG 318
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917231|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_A03.
         (485 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******