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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917234
Clone id YMU001_000098_A07
Library
Length 306
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGAGGAACTTCCTGGAGAGGATGGGCTTGAAAGAAAGTACCCAGCCTGAGGATGATCTTT
GGGATGGCAAATACATGGCGAGGCAGCAAGGATGTGGGCTTCCCATAGGGGTCAAACATT
ATCCAGGACTGTCAGAGGAATGATGTATTACCAGCGTGCTCTGGACATACTTGCACTACA
TGATGCTGAATCAGAAGCTGATTTCAAAGATGGGCAAGGCCAATGCACGATTAGAGAGCT
TACGTGGCAGCCATAAGTCCTCAAGTAAGCGTATCGCGATTGGTGCCTCTGCAAAGGGGG
CAATGC
■■Homology search results ■■ -
sp_hit_id Q9ZT82
Definition sp|Q9ZT82|CALSC_ARATH Callose synthase 12 OS=Arabidopsis thaliana
Align length 50
Score (bit) 62.8
E-value 5.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917234|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_A07.
         (306 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZT82|CALSC_ARATH Callose synthase 12 OS=Arabidopsis thalian...    63   5e-10
sp|Q9S9U0|CALSB_ARATH Callose synthase 11 OS=Arabidopsis thalian...    58   1e-08
sp|Q9LTG5|CALS4_ARATH Callose synthase 4 OS=Arabidopsis thaliana...    58   2e-08
sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana...    57   4e-08
sp|Q9SL03|CALS2_ARATH Callose synthase 2 OS=Arabidopsis thaliana...    54   2e-07
sp|Q9AUE0|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana...    54   3e-07
sp|Q9SFU6|CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana...    52   1e-06
sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8 OS=Arabidopsis...    50   3e-06
sp|Q9SJM0|CALSA_ARATH Callose synthase 10 OS=Arabidopsis thalian...    47   4e-06
sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana...    49   8e-06
sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana...    49   8e-06
sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis...    49   1e-05
sp|Q9P377|BGS3_SCHPO 1,3-beta-glucan synthase component bgs3 OS=...    40   0.003
sp|O13967|BGS2_SCHPO 1,3-beta-glucan synthase component bgs2 OS=...    39   0.011
sp|P40989|FKS2_YEAST 1,3-beta-glucan synthase component GSC2 OS=...    37   0.040
sp|P38631|FKS1_YEAST 1,3-beta-glucan synthase component FKS1 OS=...    37   0.040
sp|O74475|BGS4_SCHPO 1,3-beta-glucan synthase component bgs4 OS=...    37   0.040
sp|A2QLK4|FKS1_ASPNG 1,3-beta-glucan synthase component FKS1 OS=...    36   0.069
sp|Q10287|BGS1_SCHPO 1,3-beta-glucan synthase component bgs1 OS=...    34   0.20 
sp|Q04952|FKS3_YEAST 1,3-beta-glucan synthase component FKS3 OS=...    34   0.26 
sp|Q50288|Y200_MYCPN Uncharacterized lipoprotein MPN_200 OS=Myco...    33   0.44 
sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Ratt...    30   4.9  
sp|Q29555|GNMT_PIG Glycine N-methyltransferase (Fragment) OS=Sus...    29   6.4  
sp|Q14749|GNMT_HUMAN Glycine N-methyltransferase OS=Homo sapiens...    29   6.4  
sp|Q3V125|CC110_MOUSE Coiled-coil domain-containing protein 110 ...    29   8.4  
sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mu...    29   8.4  

>sp|Q9ZT82|CALSC_ARATH Callose synthase 12 OS=Arabidopsis thaliana
            GN=CALS12 PE=2 SV=1
          Length = 1780

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = +2

Query: 65   WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            W       R+WAS+RGQTL+RTVRGMMYY RAL +LA  D+ SE D ++G
Sbjct: 969  WTTKLRDLRLWASYRGQTLARTVRGMMYYYRALKMLAFLDSASEMDIREG 1018


>sp|Q9S9U0|CALSB_ARATH Callose synthase 11 OS=Arabidopsis thaliana
            GN=CALS11 PE=2 SV=1
          Length = 1768

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +2

Query: 65   WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            W       R+WAS+RGQTLSRTVRGMMYY  AL  LA  D+ SE D + G
Sbjct: 963  WSKKVRDLRLWASYRGQTLSRTVRGMMYYYSALKKLAFLDSASEMDIRMG 1012


>sp|Q9LTG5|CALS4_ARATH Callose synthase 4 OS=Arabidopsis thaliana
            GN=CALS4 PE=2 SV=2
          Length = 1871

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTL++TVRGMMYYQ+AL++ A  D  +E +   G
Sbjct: 1080 EEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKG 1124


>sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana
            GN=CALS3 PE=2 SV=2
          Length = 1964

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTL+RTVRGMMYY++AL++ A  D     D  +G
Sbjct: 1162 EELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAMHEDLMEG 1206


>sp|Q9SL03|CALS2_ARATH Callose synthase 2 OS=Arabidopsis thaliana
            GN=CALS2 PE=2 SV=2
          Length = 1951

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTL++TVRGMMYY++AL++ A  D   + +   G
Sbjct: 1145 EELRLWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEELMKG 1189


>sp|Q9AUE0|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana
            GN=CALS1 PE=1 SV=2
          Length = 1950

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTL++TVRGMMYY++AL++ A  D   + +   G
Sbjct: 1144 EELRLWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEELLKG 1188


>sp|Q9SFU6|CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana
            GN=CALS9 PE=2 SV=1
          Length = 1931

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = +2

Query: 89   RMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDGQG 220
            R WAS+RGQTL+RTVRGMMYY++AL + +  + ++  D  D +G
Sbjct: 1165 RFWASYRGQTLARTVRGMMYYRKALMLQSYLERKAGNDATDAEG 1208


>sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8 OS=Arabidopsis
            thaliana GN=CALS8 PE=3 SV=2
          Length = 1976

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 25/45 (55%), Positives = 29/45 (64%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R WAS RGQTLSRTVRGMMY + AL + A  D   + D  +G
Sbjct: 1201 EELRNWASFRGQTLSRTVRGMMYCREALKLQAFLDMADDEDILEG 1245


>sp|Q9SJM0|CALSA_ARATH Callose synthase 10 OS=Arabidopsis thaliana
            GN=CALS10 PE=2 SV=3
          Length = 1675

 Score = 47.4 bits (111), Expect(2) = 4e-06
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 89   RMWASHRGQTLSRTVRGMMYYQRAL 163
            R W S+RGQTL+RTVRGMMYY+RAL
Sbjct: 942  RFWVSYRGQTLARTVRGMMYYRRAL 966



 Score = 22.7 bits (47), Expect(2) = 4e-06
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   NFLERMGLKESTQPED 53
           NFLER+G  EST   D
Sbjct: 915 NFLERIGRSESTGDAD 930


>sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana
            GN=CALS7 PE=2 SV=2
          Length = 1933

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESE 196
            E  R W S+RGQTLSRTVRGMMYY+ AL++    +   E
Sbjct: 1144 EQLRQWVSYRGQTLSRTVRGMMYYRVALELQCFQEYTEE 1182
tr_hit_id A7R403
Definition tr|A7R403|A7R403_VITVI Chromosome undetermined scaffold_596, whole genome shotgun sequence OS=Vitis vinifera
Align length 53
Score (bit) 65.1
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917234|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_A07.
         (306 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7R403|A7R403_VITVI Chromosome undetermined scaffold_596, who...    65   2e-09
tr|A9TBI0|A9TBI0_PHYPA Predicted protein OS=Physcomitrella paten...    57   2e-08
tr|Q8S1X0|Q8S1X0_ORYSJ cDNA clone:J013036H01, full insert sequen...    60   6e-08
tr|Q5JMM8|Q5JMM8_ORYSJ Putative callose synthase 1 catalytic sub...    60   6e-08
tr|B8A9R1|B8A9R1_ORYSI Putative uncharacterized protein OS=Oryza...    60   6e-08
tr|A2ZXX8|A2ZXX8_ORYSJ Putative uncharacterized protein OS=Oryza...    60   6e-08
tr|A7P003|A7P003_VITVI Chromosome chr6 scaffold_3, whole genome ...    58   3e-07
tr|A2Q2S3|A2Q2S3_MEDTR Glycosyl transferase, family 48 (Fragment...    58   3e-07
tr|Q5Z5B8|Q5Z5B8_ORYSJ Putative callose synthase 1 catalytic sub...    57   4e-07
tr|Q0D9B3|Q0D9B3_ORYSJ Os06g0728800 protein OS=Oryza sativa subs...    57   4e-07
tr|B8B2Y5|B8B2Y5_ORYSI Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|A3BFM0|A3BFM0_ORYSJ Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|A9SKL4|A9SKL4_PHYPA Predicted protein OS=Physcomitrella paten...    57   4e-07
tr|A9T3S0|A9T3S0_PHYPA Predicted protein OS=Physcomitrella paten...    57   6e-07
tr|A7QR97|A7QR97_VITVI Chromosome chr13 scaffold_149, whole geno...    56   1e-06
tr|A5B716|A5B716_VITVI Putative uncharacterized protein OS=Vitis...    56   1e-06
tr|Q8W0J2|Q8W0J2_ORYSJ 1,3-beta-glucan synthase component-like O...    55   1e-06
tr|B8A790|B8A790_ORYSI Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|A2ZWF2|A2ZWF2_ORYSJ Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|A9SD54|A9SD54_PHYPA Predicted protein OS=Physcomitrella paten...    53   2e-06
tr|Q8S5U9|Q8S5U9_ORYSJ Putative glucan synthase (1,3-beta-glucan...    55   2e-06
tr|Q7XJC6|Q7XJC6_ORYSJ Os02g0832500 protein (Fragment) OS=Oryza ...    55   2e-06
tr|Q6K963|Q6K963_ORYSJ Putative callose synthase 1 catalytic sub...    55   2e-06
tr|B8AMC9|B8AMC9_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|B8AFI9|B8AFI9_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A9TZ19|A9TZ19_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06
tr|A3ADQ5|A3ADQ5_ORYSJ Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A3AD16|A3AD16_ORYSJ Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|Q93XQ3|Q93XQ3_NICAL Putative beta-1,3-glucan synthase OS=Nico...    55   2e-06
tr|A9S110|A9S110_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06

>tr|A7R403|A7R403_VITVI Chromosome undetermined scaffold_596, whole
            genome shotgun sequence OS=Vitis vinifera
            GN=GSVIVT00004069001 PE=4 SV=1
          Length = 1891

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = +2

Query: 65   WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDGQGQ 223
            W       R+WAS+RGQTLSRTVRGMMYY RAL +L   D+ SE D ++G  Q
Sbjct: 964  WSTKARDLRLWASYRGQTLSRTVRGMMYYYRALKMLTFLDSASEMDIRNGSQQ 1016


>tr|A9TBI0|A9TBI0_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_143195 PE=4 SV=1
          Length = 1929

 Score = 57.0 bits (136), Expect(2) = 2e-08
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +2

Query: 89   RMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            R WAS RGQTLSRTVRGMMYY+RAL++ A  D  ++ + +DG
Sbjct: 1151 REWASFRGQTLSRTVRGMMYYRRALELQAFLDMATDDELEDG 1192



 Score = 24.6 bits (52), Expect(2) = 2e-08
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 6    NFLERMGLKESTQPEDDLW 62
            NFL+R+GL+ S  PE  ++
Sbjct: 1123 NFLQRLGLENSDDPEAQIF 1141


>tr|Q8S1X0|Q8S1X0_ORYSJ cDNA clone:J013036H01, full insert sequence
            OS=Oryza sativa subsp. japonica GN=P0503C12.17-1 PE=2
            SV=1
          Length = 1790

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +2

Query: 65   WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDGQGQ 223
            W    +  R+WAS+RGQTL+RTVRGMMYY RAL +LA  D  SE +  +G  Q
Sbjct: 979  WAGKFQDLRLWASYRGQTLARTVRGMMYYYRALKMLAFLDNASEVEITEGTKQ 1031


>tr|Q5JMM8|Q5JMM8_ORYSJ Putative callose synthase 1 catalytic
           subunit OS=Oryza sativa subsp. japonica GN=P0503C12.17-2
           PE=4 SV=1
          Length = 1618

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +2

Query: 65  WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDGQGQ 223
           W    +  R+WAS+RGQTL+RTVRGMMYY RAL +LA  D  SE +  +G  Q
Sbjct: 807 WAGKFQDLRLWASYRGQTLARTVRGMMYYYRALKMLAFLDNASEVEITEGTKQ 859


>tr|B8A9R1|B8A9R1_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_03775 PE=4 SV=1
          Length = 1207

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +2

Query: 65   WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDGQGQ 223
            W    +  R+WAS+RGQTL+RTVRGMMYY RAL +LA  D  SE +  +G  Q
Sbjct: 982  WAGKFQDLRLWASYRGQTLARTVRGMMYYYRALKMLAFLDNASEVEITEGTKQ 1034


>tr|A2ZXX8|A2ZXX8_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_003400 PE=4 SV=1
          Length = 1533

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +2

Query: 65   WQIHGEAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDGQGQ 223
            W    +  R+WAS+RGQTL+RTVRGMMYY RAL +LA  D  SE +  +G  Q
Sbjct: 979  WAGKFQDLRLWASYRGQTLARTVRGMMYYYRALKMLAFLDNASEVEITEGTKQ 1031


>tr|A7P003|A7P003_VITVI Chromosome chr6 scaffold_3, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00024714001
            PE=4 SV=1
          Length = 1545

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTLS+TVRGMMYY++AL++ A  D   + D  +G
Sbjct: 1146 EELRLWASYRGQTLSKTVRGMMYYRKALELQAFLDMAKDEDLMEG 1190


>tr|A2Q2S3|A2Q2S3_MEDTR Glycosyl transferase, family 48 (Fragment)
           OS=Medicago truncatula GN=MtrDRAFT_AC152184g39v2 PE=4
           SV=1
          Length = 1245

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 80  EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
           E  R+WAS+RGQTL+RTVRGMMYY++AL++ A  D   + D  +G
Sbjct: 443 EELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKDEDLMEG 487


>tr|Q5Z5B8|Q5Z5B8_ORYSJ Putative callose synthase 1 catalytic subunit
            OS=Oryza sativa subsp. japonica GN=OSJNBa0069C14.2 PE=4
            SV=1
          Length = 1959

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTL+RTVRGMMYY++AL++ A  D   + D  +G
Sbjct: 1164 EELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKDDDLMEG 1208


>tr|Q0D9B3|Q0D9B3_ORYSJ Os06g0728800 protein OS=Oryza sativa subsp.
            japonica GN=Os06g0728800 PE=4 SV=1
          Length = 1872

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 80   EAARMWASHRGQTLSRTVRGMMYYQRALDILALHDAESEADFKDG 214
            E  R+WAS+RGQTL+RTVRGMMYY++AL++ A  D   + D  +G
Sbjct: 1071 EELRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKDDDLMEG 1115