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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917241
Clone id YMU001_000098_B03
Library
Length 348
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATAGGCAATTGACATGGAAGTGATGCAGCTTAGCTTGATAAATTCTTTCTGTCGCTCCT
TCCTGAGCTTATTTAAGGGGAGACTTTGTGCTCCTGTATTTCTTGTAAAAAGTCCTCTTC
TGATCTAAGCTCGCCACATACATTACACTCCATGACTGATGATGATACACCATGTGGTGG
TAACGGTGCCAAAGTTCCACCACAACTTTCACGCGGACACAGGTACCTCATAAAGAACAT
GGCGTGTGGAAAGCTTCCTTGCCCATCTCCCTCCCCGTCCATTCCCTCCTCCTCATCTGT
ATTTTTCATGGCTTCATCCTCTTCTTCAGATGCCTCACCGTCTACAGA
■■Homology search results ■■ -
sp_hit_id Q9ZUM9
Definition sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana
Align length 50
Score (bit) 67.0
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917241|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_B03.
         (348 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2 O...    67   3e-11
sp|Q9C0G0|ZN407_HUMAN Zinc finger protein 407 OS=Homo sapiens GN...    25   2.3  
sp|P27093|INHBB_CHICK Inhibin beta B chain OS=Gallus gallus GN=I...    30   3.7  
sp|Q91ZE5|EMR4_MOUSE EGF-like module-containing mucin-like hormo...    29   8.2  

>sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2
           OS=Arabidopsis thaliana GN=ASHR2 PE=2 SV=3
          Length = 398

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -1

Query: 261 QGSFPHAMFFMRYLCPRESCGGTLAPLPPHGVSSS-VMECNVCGELRSEE 115
           + +FPHA FF+RY+C +E+C GTLAPLPP    +S V+ECNVCG ++ +E
Sbjct: 344 ESNFPHAYFFVRYMCEKENCFGTLAPLPPKTHDASRVLECNVCGSVKEDE 393


>sp|Q9C0G0|ZN407_HUMAN Zinc finger protein 407 OS=Homo sapiens
           GN=ZNF407 PE=2 SV=2
          Length = 2248

 Score = 25.4 bits (54), Expect(2) = 2.3
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 16/50 (32%)
 Frame = -1

Query: 189 APLPPHGVSSS--------VMECNVCGELRSE--------EDFLQEIQEH 88
           +P PP  +S S        V++C++CG L S         E  +Q+ +EH
Sbjct: 166 SPFPPKEISVSCTIGNVDTVLKCSICGHLFSSCSDLEKHAESHMQQPKEH 215



 Score = 24.3 bits (51), Expect(2) = 2.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 EMGKEAFHTPCSL*GTCV 216
           E GKE F + C++ GTC+
Sbjct: 110 ETGKETFLSDCTVGGTCL 127


>sp|P27093|INHBB_CHICK Inhibin beta B chain OS=Gallus gallus
           GN=INHBB PE=2 SV=2
          Length = 391

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
 Frame = -1

Query: 201 GGTLAPLPPHGVSSSVMECNVCGELRSEE------DFLQEIQEHKVS 79
           G    P PP   SS    C  CG  R EE      DFL+ ++ H +S
Sbjct: 22  GAAATPTPPPAGSSPQDTCTSCGFRRPEEPGKVDGDFLEAVKRHILS 68


>sp|Q91ZE5|EMR4_MOUSE EGF-like module-containing mucin-like hormone
           receptor-like 4 OS=Mus musculus GN=Emr4 PE=1 SV=1
          Length = 689

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 223 VPHKEHGVWKASLPISLPVHSLLLICIFHGFILFFRC 333
           +PH+E GV  A   I+    SL L+C+F   I F  C
Sbjct: 335 LPHEEDGVLSALSVITYVGLSLSLLCLFLAAITFLLC 371
tr_hit_id B6THM1
Definition tr|B6THM1|B6THM1_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 53
Score (bit) 70.5
E-value 4.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917241|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_B03.
         (348 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6THM1|B6THM1_MAIZE Putative uncharacterized protein OS=Zea m...    70   4e-11
tr|B4FN88|B4FN88_MAIZE Putative uncharacterized protein OS=Zea m...    70   4e-11
tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis...    67   6e-10
tr|A9TLI8|A9TLI8_PHYPA Predicted protein (Fragment) OS=Physcomit...    66   1e-09
tr|Q6ZCF7|Q6ZCF7_ORYSJ Os08g0205300 protein OS=Oryza sativa subs...    64   4e-09
tr|Q6ZCF6|Q6ZCF6_ORYSJ SET-domain transcriptional regulator-like...    64   4e-09
tr|A2YSB4|A2YSB4_ORYSI Putative uncharacterized protein OS=Oryza...    64   5e-09
tr|Q7QH97|Q7QH97_ANOGA AGAP011087-PA (Fragment) OS=Anopheles gam...    37   0.64 
tr|Q4RZU9|Q4RZU9_TETNG Chromosome 18 SCAF14786, whole genome sho...    33   7.0  

>tr|B6THM1|B6THM1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 404

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = -1

Query: 252 FPHAMFFMRYLCPRESCGGTLAPLP--PHGVSSSVMECNVCGELRSEEDFLQE 100
           FPHA FF+RYLC  E C G LAPLP  P+G  S V ECN+CG+LR EED + +
Sbjct: 344 FPHAYFFVRYLCDNEGCWGMLAPLPPSPNGDLSHVFECNLCGKLRKEEDVIPD 396


>tr|B4FN88|B4FN88_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 268

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = -1

Query: 252 FPHAMFFMRYLCPRESCGGTLAPLP--PHGVSSSVMECNVCGELRSEEDFLQE 100
           FPHA FF+RYLC  E C G LAPLP  P+G  S V ECN+CG+LR EED + +
Sbjct: 208 FPHAYFFVRYLCDNEGCWGMLAPLPPSPNGDLSHVFECNLCGKLRKEEDVIPD 260


>tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031337 PE=4 SV=1
          Length = 405

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
 Frame = -1

Query: 252 FPHAMFFMRYLCPRESCGGTLAPLPP---HGVSSSVMECNVCGELRS-EEDF 109
           FPHA FF+RY+C RE+C GTLAPLPP       S++MECNVCG  +  +EDF
Sbjct: 343 FPHAYFFLRYMCTRENCWGTLAPLPPSDSDASPSNLMECNVCGNSKKXDEDF 394


>tr|A9TLI8|A9TLI8_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_4377 PE=4 SV=1
          Length = 377

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = -1

Query: 261 QGSFPHAMFFMRYLCPRESCGGTLAPLPP----HGVSSSVMECNVCGELRSEE 115
           +  F HAMFF++YLCP E CGGT+APLPP    H      MECN CG +RS+E
Sbjct: 325 EDDFGHAMFFVKYLCPVEGCGGTMAPLPPGELDHQGLEGSMECNFCGCVRSDE 377


>tr|Q6ZCF7|Q6ZCF7_ORYSJ Os08g0205300 protein OS=Oryza sativa subsp.
           japonica GN=P0486F07.32-1 PE=4 SV=1
          Length = 331

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = -1

Query: 342 DGEASEEEDEAMKNTXXXXXXXXXXXGQGSFPHAMFFMRYLCPRESCGGTLAPLP--PHG 169
           DG   E  D+ M+                 FPH+ FF+RYLC    C G LAPLP  P+G
Sbjct: 244 DGNGGEGGDDGMEQEEGDGGSDS----DDDFPHSYFFVRYLCNHGECYGMLAPLPPLPNG 299

Query: 168 VSSSVMECNVCGELRSEED 112
             S V ECNVCG L++E++
Sbjct: 300 EPSHVFECNVCGNLKNEDE 318


>tr|Q6ZCF6|Q6ZCF6_ORYSJ SET-domain transcriptional regulator-like
           protein (Putative uncharacterized protein) OS=Oryza
           sativa subsp. japonica GN=P0486F07.32-2 PE=4 SV=1
          Length = 392

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = -1

Query: 342 DGEASEEEDEAMKNTXXXXXXXXXXXGQGSFPHAMFFMRYLCPRESCGGTLAPLP--PHG 169
           DG   E  D+ M+                 FPH+ FF+RYLC    C G LAPLP  P+G
Sbjct: 305 DGNGGEGGDDGMEQEEGDGGSDS----DDDFPHSYFFVRYLCNHGECYGMLAPLPPLPNG 360

Query: 168 VSSSVMECNVCGELRSEED 112
             S V ECNVCG L++E++
Sbjct: 361 EPSHVFECNVCGNLKNEDE 379


>tr|A2YSB4|A2YSB4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28216 PE=4 SV=1
          Length = 392

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = -1

Query: 342 DGEASEEEDEAMKNTXXXXXXXXXXXGQGSFPHAMFFMRYLCPRESCGGTLAPLP--PHG 169
           DG   E  D+ M+                 FPH+ FF+RYLC    C G LAPLP  P+G
Sbjct: 305 DGNGGEGGDDEMEQEEGDGGSDS----DDDFPHSYFFVRYLCNHGECYGMLAPLPPLPNG 360

Query: 168 VSSSVMECNVCGELRSEED 112
             S V ECNVCG L++E++
Sbjct: 361 EPSHVFECNVCGNLKNEDE 379


>tr|Q7QH97|Q7QH97_ANOGA AGAP011087-PA (Fragment) OS=Anopheles gambiae
            GN=AGAP011087 PE=4 SV=4
          Length = 1200

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 255  SFPHAMFFMRYLCPRESCGGTLAPLPPHGVSSSVMECNVCGELRSEEDFLQEIQEHKV 82
            +FP  +  M +L P      +L P P HG SS++ +CN+C   +      Q++QEH +
Sbjct: 1071 NFPTKLLSMNFLKPATP---SLVPTPTHGSSSALFQCNLC---KKPLPSAQKLQEHLI 1122


>tr|Q4RZU9|Q4RZU9_TETNG Chromosome 18 SCAF14786, whole genome
           shotgun sequence OS=Tetraodon nigroviridis
           GN=GSTENG00026319001 PE=4 SV=1
          Length = 303

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 219 CPRESCGGTLAPLPPHGVSSSVMECNVCGE 130
           C  ES GG   P PP  VSS V +C +CG+
Sbjct: 178 CLDESEGGASVPPPPLPVSSGVPDCPICGK 207