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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917242
Clone id YMU001_000098_B04
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGCCCCTTCTATGGTTAATGTTTGGTTTGCATAGTCATCAACAGCATGTGTTGTTCTC
AACCATGGGCGCCCTAGCAGCATCCCATATGCCCCTTGCACATCCAGAACTGAGAAACTG
GTTTTAAATTTTTCCCTCCAAACTCTTATCTCATATTTTCAATCATACACGTCGCTTGTA
CCACTCTGTGATCTGCCATTCGCACTTTAAAGGGTGCTGGCTTGAGATTCGTGATACCCA
GTCTCTGTTGGAGATGAACTCCCATTATGTTGACTCCTGCTCCTCCATCCAAGATAACAC
TTGAGAGAGGTTCCCACTGCTTCCTAACCTTGTACTCCACTTGAATGAGTGGAACTTAAT
CATATCGGACGGCCGTCAGGTCCACTGTTCTGGCCT
■■Homology search results ■■ -
sp_hit_id A9WH12
Definition sp|A9WH12|RPOB_CHLAA DNA-directed RNA polymerase subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Align length 73
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917242|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_B04.
         (396 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9WH12|RPOB_CHLAA DNA-directed RNA polymerase subunit beta OS...    33   0.44 
sp|Q0AUH2|RPOB_SYNWW DNA-directed RNA polymerase subunit beta OS...    30   2.9  
sp|Q6ZPJ0|TEX2_MOUSE Testis-expressed sequence 2 protein OS=Mus ...    30   4.9  
sp|Q54KD5|Y7399_DICDI P17/29C-like protein DDB_G0287399 OS=Dicty...    29   6.4  
sp|Q3A9Q7|RPOB_CARHZ DNA-directed RNA polymerase subunit beta OS...    29   6.4  
sp|Q8T2I5|LYSG3_DICDI Probable GH family 25 lysozyme 3 OS=Dictyo...    29   6.4  
sp|Q03900|YD132_YEAST Uncharacterized protein YDR132C OS=Sacchar...    29   8.3  

>sp|A9WH12|RPOB_CHLAA DNA-directed RNA polymerase subunit beta
            OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635
            / J-10-fl) GN=rpoB PE=3 SV=1
          Length = 1227

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -2

Query: 380  PDGRPI*LSSTHSSGVQG*EAVGTSLKCYLGWRSRSQHNGSSSPTETGYHESQASTL*SA 201
            PDGRP+ +   +  GV     +G  L+ +LGW +       ++P   G HE Q   L   
Sbjct: 997  PDGRPVDII-LNPIGVPSRMNIGQILETHLGWAAARLGFRVATPVFDGAHEDQIKDLLVQ 1055

Query: 200  NGRSQSGTSDVYD 162
             G    G   +YD
Sbjct: 1056 AGLPADGKVTLYD 1068


>sp|Q0AUH2|RPOB_SYNWW DNA-directed RNA polymerase subunit beta
            OS=Syntrophomonas wolfei subsp. wolfei (strain
            Goettingen) GN=rpoB PE=3 SV=1
          Length = 1107

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 29/114 (25%), Positives = 48/114 (42%)
 Frame = -2

Query: 377  DGRPI*LSSTHSSGVQG*EAVGTSLKCYLGWRSRSQHNGSSSPTETGYHESQASTL*SAN 198
            DG P+ +   +  GV     +G  L+C++GW +R+     ++P   G +E    T     
Sbjct: 853  DGTPVEIV-LNPLGVPSRMNIGQILECHMGWAARALGLNIATPVFDGANEEDIFTKLREA 911

Query: 197  GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDD 36
               +SG + ++D +       EKFK   +V  V            L+  H VDD
Sbjct: 912  SLLESGKTILFDGR-----TGEKFKHEITVGYVY----------MLKLAHLVDD 950


>sp|Q6ZPJ0|TEX2_MOUSE Testis-expressed sequence 2 protein OS=Mus
           musculus GN=Tex2 PE=1 SV=2
          Length = 1128

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 15/139 (10%)
 Frame = +2

Query: 8   LLWLMFGLHSHQQHVLFSTMGALAASHMPLAHPE-LRNWF*IFPSKLLSHIFNHTRRLYH 184
           ++W      +H+ H     +   +   + +  PE L+ W        ++ I+N+    YH
Sbjct: 510 MIWFFTPPSAHKHHKSLKALRHQSTRSLDIKEPEILKGW--------MNEIYNYDPETYH 561

Query: 185 SVICHSHF---KGCWLEIRDTQSLLEMNSHYVDS-------CSSIQDNT*ERFPLLPNLV 334
           + + HS F   +G  L +      +   + Y ++          I D +  +  L+P  +
Sbjct: 562 ATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKIYLVPKSL 621

Query: 335 LHLNEWN----LIISDGRQ 379
                WN    + I  GRQ
Sbjct: 622 ARKRIWNKKYPICIELGRQ 640


>sp|Q54KD5|Y7399_DICDI P17/29C-like protein DDB_G0287399
           OS=Dictyostelium discoideum GN=DDB_G0287399 PE=3 SV=1
          Length = 486

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = -2

Query: 356 SSTHSSGVQG*EAVGTSLKCYLGWRSRSQHNGSSSPTETGYHESQASTL*SANGRSQSGT 177
           SS  SSG     + G+S     G +S +  +GSSS   +G     AS+  S+   S SG+
Sbjct: 85  SSGSSSGSSSGSSSGSSSGSSSGSQSGNASSGSSSSGSSGSQSGNASSGTSSGSSSSSGS 144

Query: 176 S 174
           S
Sbjct: 145 S 145


>sp|Q3A9Q7|RPOB_CARHZ DNA-directed RNA polymerase subunit beta
            OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
            6008) GN=rpoB PE=3 SV=1
          Length = 1132

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = -2

Query: 380  PDGRPI*LSSTHSSGVQG*EAVGTSLKCYLGWRSRSQHNGSSSPTETGYHESQASTL*SA 201
            PDG P+ +   +  GV     +G  L+C+LGW +++     ++P   G  E         
Sbjct: 875  PDGTPVEIV-LNPLGVPSRMNIGQILECHLGWAAKALGINVATPIFNGATEEDIFEALRK 933

Query: 200  NGRSQSGTSDVYD 162
             G  + G  +V D
Sbjct: 934  AGLPEDGKIEVRD 946


>sp|Q8T2I5|LYSG3_DICDI Probable GH family 25 lysozyme 3
           OS=Dictyostelium discoideum GN=DDB_G0276439 PE=3 SV=1
          Length = 480

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 24/74 (32%), Positives = 36/74 (48%)
 Frame = -2

Query: 395 GQNSGPDGRPI*LSSTHSSGVQG*EAVGTSLKCYLGWRSRSQHNGSSSPTETGYHESQAS 216
           G  SG  G     SS   SG  G  A GTS        + S   GSS+ + +G ++S ++
Sbjct: 372 GSQSGSSGSQS-TSSGSQSGSSG--ATGTSSTASSTSATGSSSTGSSTGSSSGSNDSGSN 428

Query: 215 TL*SANGRSQSGTS 174
              S++G + SG+S
Sbjct: 429 DSGSSSGSNNSGSS 442


>sp|Q03900|YD132_YEAST Uncharacterized protein YDR132C
           OS=Saccharomyces cerevisiae GN=YDR132C PE=1 SV=1
          Length = 495

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
 Frame = +2

Query: 71  ALAASHMP---LAHPELRNWF*IFPS-KLLSHIFNHTRRLYHSVICHSHFKGCWLEIRDT 238
           AL  SH+P      P+L+N+   FPS    + I  H        +C     G  ++I   
Sbjct: 368 ALFGSHLPNTPSGAPKLKNYQYRFPSDSTQTKIETHYLLPACIYLCDLDING--IKISQV 425

Query: 239 QSLLEMNSHYVDSCSSIQDNT*ERFPLLPNLVLHLNEWNLIISDG 373
           Q+LL   + + D    + D    RF     L L  + W L + DG
Sbjct: 426 QTLLTDKNKFNDRVIDVSDPLDLRFCSGLKLYLRKSLWKLAVKDG 470
tr_hit_id Q6UUM4
Definition tr|Q6UUM4|Q6UUM4_ORYSJ Putative uncharacterized protein (Putative polyprotein) OS=Oryza sativa subsp. japonica
Align length 60
Score (bit) 38.9
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917242|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_B04.
         (396 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6UUM4|Q6UUM4_ORYSJ Putative uncharacterized protein (Putativ...    39   4e-04
tr|Q33A45|Q33A45_ORYSJ Retrotransposon protein, putative, unclas...    37   5e-04
tr|Q8S5E4|Q8S5E4_ORYSA Putative uncharacterized protein OSJNBb00...    37   5e-04
tr|Q7XNI8|Q7XNI8_ORYSJ OSJNBb0032D24.5 protein OS=Oryza sativa s...    36   7e-04
tr|Q53KC9|Q53KC9_ORYSJ Retrotransposon protein, putative, unclas...    35   0.001
tr|Q53KG9|Q53KG9_ORYSJ Retrotransposon protein, putative, unclas...    37   0.002
tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 prot...    36   0.002
tr|Q7G4P3|Q7G4P3_ORYSJ Retrotransposon protein, putative, unclas...    35   0.003
tr|Q8S6X2|Q8S6X2_ORYSA Putative pol polyprotein OS=Oryza sativa ...    36   0.003
tr|Q2QZM9|Q2QZM9_ORYSJ Retrotransposon protein, putative, unclas...    35   0.003
tr|Q33A67|Q33A67_ORYSJ Retrotransposon protein, putative, unclas...    36   0.003
tr|Q7XSP1|Q7XSP1_ORYSJ OSJNBa0070M12.15 protein OS=Oryza sativa ...    35   0.004
tr|Q7XN29|Q7XN29_ORYSJ OSJNBa0083I11.15 protein (OSJNBa0021F22.2...    35   0.004
tr|Q339U0|Q339U0_ORYSJ Retrotransposon protein, putative, unclas...    35   0.004
tr|Q7XNM6|Q7XNM6_ORYSA OSJNBb0068N06.4 protein OS=Oryza sativa G...    37   0.004
tr|Q0KIL1|Q0KIL1_SOLDE Gag/pol polyprotein, 3'-partial, putative...    37   0.004
tr|Q2QSH4|Q2QSH4_ORYSJ Retrotransposon protein, putative, unclas...    36   0.004
tr|Q2QVZ3|Q2QVZ3_ORYSJ Retrotransposon protein, putative, unclas...    35   0.004
tr|Q2QWF9|Q2QWF9_ORYSJ Retrotransposon protein, putative, unclas...    34   0.005
tr|Q6ASW9|Q6ASW9_ORYSJ Reverse transcriptase (RNA-dependent DNA ...    35   0.005
tr|Q2QQK7|Q2QQK7_ORYSJ Retrotransposon protein, putative, unclas...    35   0.005
tr|Q7XLE6|Q7XLE6_ORYSJ OSJNBa0013A04.23 protein (OSJNBb0069N01.4...    35   0.005
tr|Q01M82|Q01M82_ORYSA H0622G10.2 protein OS=Oryza sativa GN=H06...    35   0.005
tr|Q2QR22|Q2QR22_ORYSJ Retrotransposon protein, putative, unclas...    35   0.007
tr|Q2R2X8|Q2R2X8_ORYSJ Retrotransposon protein, putative, unclas...    35   0.007
tr|Q10I05|Q10I05_ORYSJ Retrotransposon protein, putative, unclas...    35   0.007
tr|Q94LN5|Q94LN5_ORYSJ Putative retroelement pol polyprotein (Re...    35   0.007
tr|Q6AVD1|Q6AVD1_ORYSJ Putative polyprotein OS=Oryza sativa subs...    35   0.007
tr|Q8H8Q2|Q8H8Q2_ORYSJ Putative gag-pol polyprotein (Retrotransp...    35   0.007
tr|Q75HC5|Q75HC5_ORYSJ Putative reverse transcriptase (Retrotran...    35   0.007

>tr|Q6UUM4|Q6UUM4_ORYSJ Putative uncharacterized protein (Putative
           polyprotein) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0079I01.34 PE=4 SV=1
          Length = 760

 Score = 38.9 bits (89), Expect(2) = 4e-04
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = -2

Query: 197 GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           G + S T +V +   E+ V  +   T+FSV+D +G+Y +LLGR W+     +    +Q L
Sbjct: 473 GSNPSETKEVLN--VELTVGNKTIPTTFSVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 530



 Score = 27.7 bits (60), Expect(2) = 4e-04
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +++DGGA VN+M     ++LG
Sbjct: 431 KPMSKMMVDGGAAVNLMPYTTFRKLG 456


>tr|Q33A45|Q33A45_ORYSJ Retrotransposon protein, putative,
           unclassified, expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os10g15340 PE=4 SV=1
          Length = 828

 Score = 37.4 bits (85), Expect(2) = 5e-04
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -2

Query: 158 KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           K +I V  +   T+F V+D +G+YG+L GR W+   + +    +Q+L
Sbjct: 702 KIKITVGSKTVPTTFFVIDGKGSYGLLHGRDWIHANYCIPSTMHQSL 748



 Score = 28.9 bits (63), Expect(2) = 5e-04
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +++DGGA VN+M     ++LG
Sbjct: 649 KPMSKILVDGGAAVNLMPYATFRKLG 674


>tr|Q8S5E4|Q8S5E4_ORYSA Putative uncharacterized protein
           OSJNBb0047B19.20 OS=Oryza sativa GN=OSJNBb0047B19.20
           PE=4 SV=1
          Length = 821

 Score = 37.4 bits (85), Expect(2) = 5e-04
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -2

Query: 158 KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           K +I V  +   T+F V+D +G+YG+L GR W+   + +    +Q+L
Sbjct: 695 KIKITVGSKTVPTTFFVIDGKGSYGLLHGRDWIHANYCIPSTMHQSL 741



 Score = 28.9 bits (63), Expect(2) = 5e-04
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +++DGGA VN+M     ++LG
Sbjct: 642 KPMSKILVDGGAAVNLMPYATFRKLG 667


>tr|Q7XNI8|Q7XNI8_ORYSJ OSJNBb0032D24.5 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0032D24.5 PE=4 SV=1
          Length = 1355

 Score = 36.2 bits (82), Expect(2) = 7e-04
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -2

Query: 197 GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           G +QS T  V +   E+ V  +   T+F V+D +G+Y +LLGR W+     +     Q L
Sbjct: 404 GGNQSETKGVLN--VELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMQQCL 461



 Score = 29.6 bits (65), Expect(2) = 7e-04
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +PLS +I+DGGA VN+M     ++LG
Sbjct: 362 KPLSKMIVDGGAAVNLMPYATFRKLG 387


>tr|Q53KC9|Q53KC9_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g22340 PE=4 SV=1
          Length = 1497

 Score = 34.7 bits (78), Expect(2) = 0.001
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           E+ V  +   T+F V+D +G+Y +LLGR W+     +    +Q L
Sbjct: 577 ELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 621



 Score = 30.0 bits (66), Expect(2) = 0.001
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +I+DGGA VN+M   + ++LG
Sbjct: 522 KPMSKMIVDGGAAVNLMPYAMFRKLG 547


>tr|Q53KG9|Q53KG9_ORYSJ Retrotransposon protein, putative,
            unclassified OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g25400 PE=4 SV=1
          Length = 1163

 Score = 36.6 bits (83), Expect(2) = 0.002
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -2

Query: 152  EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
            E+ V  +   T+F V+D +G+Y +LLGR W+ T   +    +Q L
Sbjct: 930  ELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCL 974



 Score = 27.7 bits (60), Expect(2) = 0.002
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +++DGGA VN+M     ++LG
Sbjct: 875 KPMSKMMVDGGAAVNLMPYATFRKLG 900


>tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 protein)
            OS=Oryza sativa subsp. japonica GN=OSJNBa0042N22.17 PE=4
            SV=1
          Length = 1436

 Score = 36.2 bits (82), Expect(2) = 0.002
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -2

Query: 197  GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
            G + S T  V +   E+ V  +   TSF V+D +G+Y +LLGR W+     +    +Q L
Sbjct: 940  GGNSSETKGVLN--VELTVGSKTIPTSFFVIDGKGSYSLLLGRDWIHVNCCIPSTMHQCL 997



 Score = 27.7 bits (60), Expect(2) = 0.002
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +++DGGA VN+M     ++LG
Sbjct: 898 KPMSKMMVDGGAAVNLMPYTTFRKLG 923


>tr|Q7G4P3|Q7G4P3_ORYSJ Retrotransposon protein, putative,
           unclassified (Reverse transcriptase (RNA-dependent DNA
           polymerase), putative) OS=Oryza sativa subsp. japonica
           GN=LOC_Os10g11190 PE=4 SV=1
          Length = 1383

 Score = 34.7 bits (78), Expect(2) = 0.003
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           E+ V  +   T+F V+D +G+Y +LLGR W+     +    +Q L
Sbjct: 714 ELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 758



 Score = 28.9 bits (63), Expect(2) = 0.003
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +I+DGGA VN+M     ++LG
Sbjct: 659 KPMSKMIVDGGAAVNLMPYATFRKLG 684


>tr|Q8S6X2|Q8S6X2_ORYSA Putative pol polyprotein OS=Oryza sativa
           GN=OSJNBa0082N11.20 PE=4 SV=1
          Length = 505

 Score = 35.8 bits (81), Expect(2) = 0.003
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -2

Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           E+ +  +   T+F ++DVQG+Y ++LGR W+     V    +Q L
Sbjct: 386 ELTMGNKTLPTTFFIVDVQGSYNVILGRCWIHANCCVPSTLHQCL 430



 Score = 27.7 bits (60), Expect(2) = 0.003
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLG 236
           +P+S +++D GA VN+M   L +RLG
Sbjct: 331 KPVSRMLVDRGAAVNLMPYSLFKRLG 356


>tr|Q2QZM9|Q2QZM9_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g45440 PE=4 SV=1
          Length = 431

 Score = 34.7 bits (78), Expect(2) = 0.003
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18
           E+ +  +   T+F V+D +G+Y +LLGR W+     +    +Q+L
Sbjct: 182 ELTIGSKTVPTTFFVIDGKGSYNLLLGRDWIHANCCIPSTMHQSL 226



 Score = 28.9 bits (63), Expect(2) = 0.003
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 313 EPLSSVILDGGAGVNIMGVHLQQRLGIT 230
           +P+S +++DGGA VN+M     ++LG T
Sbjct: 127 KPISKMLVDGGAAVNLMPYATFKKLGKT 154