NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917243
Clone id YMU001_000098_B06
Library
Length 475
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATACGGTTTCTGATGTGTGTTGATGTATGGCTACAGGGGCTATTACAAGTGTAGCACAG
TGAGGTTATGTCTTGCAAGAAAGCATGTAGAGCGAGCTCTTGACGATTCAAGCATGCTTA
TCGTCGCTTATGAAGGAGAGCACAATCATCCACAACCTATAAATGAAATGGTCCAGGAAT
GATGGGTGCACGTGTAAGGAAGCCTTAAGGTAGTCCAACAATATCCTTGTACTGAAGGAG
TTTCTTGATAAATAGTTGTCATGGCCTCCTCTTGGTGAAGGGTCATATAGAGTTTCGTAC
TCCAAATTTGCATATTAGAGTACAAGGGTGGGGTTTTTTTTGATTCAGGTCCTTCATTAC
AGGTCTGGTTTTGTACATTGGGTTTGCCAATGACAAAAACCCCTATATCTGTACTAAAAG
ACACTATTATGAAGCTTTCAATGCAAGAAAGTCATAGTTTTTGCGATCAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9SJA8
Definition sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=Arabidopsis thaliana
Align length 40
Score (bit) 71.6
E-value 2.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917243|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_B06.
         (475 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=A...    72   2e-12
sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15 OS=A...    71   2e-12
sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7 OS=Ar...    70   5e-12
sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=A...    70   6e-12
sp|Q9SR07|WRK39_ARATH Probable WRKY transcription factor 39 OS=A...    69   8e-12
sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1              69   1e-11
sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21 OS=A...    68   2e-11
sp|Q93WU6|WRK74_ARATH Probable WRKY transcription factor 74 OS=A...    67   3e-11
sp|Q9LP56|WRK65_ARATH Probable WRKY transcription factor 65 OS=A...    60   6e-09
sp|O04609|WRK22_ARATH WRKY transcription factor 22 OS=Arabidopsi...    59   8e-09
sp|Q9SA80|WRK14_ARATH Probable WRKY transcription factor 14 OS=A...    59   1e-08
sp|O64747|WRK35_ARATH Probable WRKY transcription factor 35 OS=A...    57   4e-08
sp|Q9C9F0|WRKY9_ARATH Probable WRKY transcription factor 9 OS=Ar...    55   2e-07
sp|Q9SAH7|WRK40_ARATH Probable WRKY transcription factor 40 OS=A...    55   2e-07
sp|Q9FLX8|WRK27_ARATH Probable WRKY transcription factor 27 OS=A...    54   3e-07
sp|Q9C519|WRKY6_ARATH WRKY transcription factor 6 OS=Arabidopsis...    52   1e-06
sp|Q8VWV6|WRK61_ARATH Probable WRKY transcription factor 61 OS=A...    52   1e-06
sp|Q93WU7|WRK58_ARATH Probable WRKY transcription factor 58 OS=A...    52   2e-06
sp|Q93WT0|WRK31_ARATH Probable WRKY transcription factor 31 OS=A...    52   2e-06
sp|Q8VWJ2|WRK28_ARATH Probable WRKY transcription factor 28 OS=A...    52   2e-06
sp|Q93WV5|WRK69_ARATH Probable WRKY transcription factor 69 OS=A...    51   2e-06
sp|Q8S8P5|WRK33_ARATH Probable WRKY transcription factor 33 OS=A...    51   3e-06
sp|Q93WV4|WRK71_ARATH Probable WRKY transcription factor 71 OS=A...    50   4e-06
sp|Q9ZUU0|WRK44_ARATH WRKY transcription factor 44 OS=Arabidopsi...    50   4e-06
sp|Q93WV6|WRK68_ARATH Probable WRKY transcription factor 68 OS=A...    50   5e-06
sp|Q9XEC3|WRK42_ARATH Probable WRKY transcription factor 42 OS=A...    50   5e-06
sp|Q9FGZ4|WRK48_ARATH Probable WRKY transcription factor 48 OS=A...    50   7e-06
sp|Q9LXG8|WRK72_ARATH Probable WRKY transcription factor 72 OS=A...    49   9e-06
sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=A...    49   9e-06
sp|Q9FL26|WRKY8_ARATH Probable WRKY transcription factor 8 OS=Ar...    49   1e-05

>sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17
           OS=Arabidopsis thaliana GN=WRKY17 PE=2 SV=2
          Length = 321

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQ 155
           RGYYKCST R C ARKHVERALDDS+MLIV YEGEH H Q
Sbjct: 263 RGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRHHQ 302


>sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15
           OS=Arabidopsis thaliana GN=WRKY15 PE=2 SV=1
          Length = 317

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS+VR C ARKHVERA DDSSMLIV YEG+HNH
Sbjct: 260 RGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNH 297


>sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7
           OS=Arabidopsis thaliana GN=WRKY7 PE=2 SV=1
          Length = 353

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS+VR C ARKHVERALDD+ MLIV YEG+HNH
Sbjct: 301 RGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNH 338


>sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11
           OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2
          Length = 325

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 32/40 (80%), Positives = 33/40 (82%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQ 155
           RGYYKCST R C ARKHVERALDD +MLIV YEGEH H Q
Sbjct: 266 RGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRHNQ 305


>sp|Q9SR07|WRK39_ARATH Probable WRKY transcription factor 39
           OS=Arabidopsis thaliana GN=WRKY39 PE=2 SV=1
          Length = 330

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS+VR C ARKHVER +D++SMLIV YEGEHNH
Sbjct: 282 RGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNH 319


>sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1
          Length = 397

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS+VR C ARKHVER +DD SMLIV YEG+HNH
Sbjct: 352 RGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNH 389


>sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21
           OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1
          Length = 380

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQ 155
           RGYYKCS++R C ARKHVER L+D +MLIV YE EHNHP+
Sbjct: 333 RGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHPK 372


>sp|Q93WU6|WRK74_ARATH Probable WRKY transcription factor 74
           OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=1
          Length = 330

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS+VR C ARKHVER ++++SMLIV YEGEHNH
Sbjct: 282 RGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNH 319


>sp|Q9LP56|WRK65_ARATH Probable WRKY transcription factor 65
           OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1
          Length = 259

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQPI 161
           RGYY+CS+ + C ARK VER+ DD +M+++ Y  EHNHP P+
Sbjct: 94  RGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHPWPL 135


>sp|O04609|WRK22_ARATH WRKY transcription factor 22 OS=Arabidopsis
           thaliana GN=WRKY22 PE=2 SV=1
          Length = 298

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 26/41 (63%), Positives = 28/41 (68%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQP 158
           RGYY+CST + CLARK VER   D  M IV Y  EHNHP P
Sbjct: 148 RGYYRCSTSKGCLARKQVERNRSDPKMFIVTYTAEHNHPAP 188
tr_hit_id Q40828
Definition tr|Q40828|Q40828_PETCR WRKY3 OS=Petroselinum crispum
Align length 44
Score (bit) 74.7
E-value 2.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917243|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_B06.
         (475 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q40828|Q40828_PETCR WRKY3 OS=Petroselinum crispum PE=2 SV=1         75   2e-12
tr|Q9FXS1|Q9FXS1_TOBAC WRKY transcription factor NtEIG-D48 OS=Ni...    74   4e-12
tr|Q8GTG1|Q8GTG1_SOLLC WRKY transcription factor IId-4 (Fragment...    74   4e-12
tr|Q6YNB9|Q6YNB9_PHYPA WRKY transcription factor 1 OS=Physcomitr...    74   4e-12
tr|Q2PJS0|Q2PJS0_SOYBN WRKY13 OS=Glycine max PE=2 SV=1                 74   4e-12
tr|Q2PJR8|Q2PJR8_SOYBN WRKY33 OS=Glycine max PE=2 SV=1                 74   4e-12
tr|A9S4W9|A9S4W9_PHYPA Transcription factor WRKY1 OS=Physcomitre...    74   4e-12
tr|A7UGC9|A7UGC9_SOLTU WRKY transcription factor 2 OS=Solanum tu...    74   4e-12
tr|B7FGQ3|B7FGQ3_MEDTR Putative uncharacterized protein OS=Medic...    73   8e-12
tr|A9S229|A9S229_PHYPA Transcription factor WRKY25 (Fragment) OS...    73   8e-12
tr|Q8GSH1|Q8GSH1_SOLLC WRKY transcription factor IId-5 (WRKY tra...    72   1e-11
tr|Q09I56|Q09I56_PHYPA WRKY transcription factor 8 (Fragment) OS...    72   1e-11
tr|Q09I55|Q09I55_PHYPA WRKY transcription factor 9 (Fragment) OS...    72   1e-11
tr|B5AK53|B5AK53_ARAHY WRKY transcription factor OS=Arachis hypo...    72   1e-11
tr|A9T4I7|A9T4I7_PHYPA Transcription factor WRKY9 OS=Physcomitre...    72   1e-11
tr|A9RFR5|A9RFR5_PHYPA Transcription factor WRKY 2 OS=Physcomitr...    72   1e-11
tr|A7LHG0|A7LHG0_SOYBN WRKY14 (Fragment) OS=Glycine max GN=WRKY1...    72   1e-11
tr|Q0WTF3|Q0WTF3_ARATH WRKY transcription factor 17 OS=Arabidops...    72   2e-11
tr|A7PLF6|A7PLF6_VITVI Chromosome chr7 scaffold_20, whole genome...    72   2e-11
tr|A9PII7|A9PII7_POPTR Putative uncharacterized protein OS=Popul...    71   2e-11
tr|A7PUN0|A7PUN0_VITVI Chromosome chr7 scaffold_31, whole genome...    71   2e-11
tr|B0LUS5|B0LUS5_SOYBN Transcription factor OS=Glycine max GN=WR...    71   3e-11
tr|B6SKM6|B6SKM6_MAIZE WRKY transcription factor 21 OS=Zea mays ...    70   4e-11
tr|B4FD07|B4FD07_MAIZE Putative uncharacterized protein OS=Zea m...    70   4e-11
tr|B2KJ50|B2KJ50_HORVD WRKY transcription factor 7 OS=Hordeum vu...    70   4e-11
tr|A3RG97|A3RG97_WHEAT WRKY68-b transcription factor OS=Triticum...    70   4e-11
tr|A3FBG0|A3FBG0_WHEAT WRKY transcription factor OS=Triticum aes...    70   4e-11
tr|Q6R4S8|Q6R4S8_9BRAS WRKY transcription factor 11 OS=Capsella ...    70   5e-11
tr|Q6R4S7|Q6R4S7_9BRAS WRKY transcription factor 11 OS=Capsella ...    70   5e-11
tr|B3GAU6|B3GAU6_WHEAT WRKY16 transcription factor OS=Triticum a...    70   5e-11

>tr|Q40828|Q40828_PETCR WRKY3 OS=Petroselinum crispum PE=2 SV=1
          Length = 341

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQPINE 167
           RGYYKCS+VR C ARKHVERA+DD +MLIV YEGEHNH Q  NE
Sbjct: 282 RGYYKCSSVRGCPARKHVERAVDDPTMLIVTYEGEHNHSQSSNE 325


>tr|Q9FXS1|Q9FXS1_TOBAC WRKY transcription factor NtEIG-D48
           OS=Nicotiana tabacum GN=NtEIG-D48 PE=2 SV=1
          Length = 350

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 34/44 (77%), Positives = 36/44 (81%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQPINE 167
           RGYYKCS+VR C ARKHVERALDD +MLIV YEGEHNH   I E
Sbjct: 297 RGYYKCSSVRGCPARKHVERALDDPTMLIVTYEGEHNHSHSITE 340


>tr|Q8GTG1|Q8GTG1_SOLLC WRKY transcription factor IId-4 (Fragment)
           OS=Solanum lycopersicum PE=2 SV=1
          Length = 60

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQPINE 167
           RGYYKCS+VR+C ARKHVERALDD +MLIV YEGEHNH   + E
Sbjct: 8   RGYYKCSSVRVCPARKHVERALDDPTMLIVTYEGEHNHSLSVAE 51


>tr|Q6YNB9|Q6YNB9_PHYPA WRKY transcription factor 1
           OS=Physcomitrella patens GN=WRKY1 PE=2 SV=1
          Length = 395

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQ 155
           RGYYKCS++R C ARKHVER+++DSSMLIV YEG+HNHPQ
Sbjct: 343 RGYYKCSSIRGCPARKHVERSMEDSSMLIVTYEGDHNHPQ 382


>tr|Q2PJS0|Q2PJS0_SOYBN WRKY13 OS=Glycine max PE=2 SV=1
          Length = 324

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQP 158
           RGYYKCS+VR C ARKHVERA DD +MLIV YEGEH HPQP
Sbjct: 266 RGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQP 306


>tr|Q2PJR8|Q2PJR8_SOYBN WRKY33 OS=Glycine max PE=2 SV=1
          Length = 199

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQP 158
           RGYYKCS+VR C ARKHVERA DD +MLIV YEGEH HPQP
Sbjct: 141 RGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQP 181


>tr|A9S4W9|A9S4W9_PHYPA Transcription factor WRKY1 OS=Physcomitrella
           patens subsp. patens GN=WRKY1 PE=4 SV=1
          Length = 395

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQ 155
           RGYYKCS++R C ARKHVER+++DSSMLIV YEG+HNHPQ
Sbjct: 343 RGYYKCSSIRGCPARKHVERSMEDSSMLIVTYEGDHNHPQ 382


>tr|A7UGC9|A7UGC9_SOLTU WRKY transcription factor 2 OS=Solanum
           tuberosum PE=2 SV=1
          Length = 354

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 34/44 (77%), Positives = 36/44 (81%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNHPQPINE 167
           RGYYKCS+VR C ARKHVERALDD +MLIV YEGEHNH   I E
Sbjct: 301 RGYYKCSSVRGCPARKHVERALDDPAMLIVTYEGEHNHSHSITE 344


>tr|B7FGQ3|B7FGQ3_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 338

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS+VR C ARKHVERALDD+SML+V YEGEHNH
Sbjct: 286 RGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNH 323


>tr|A9S229|A9S229_PHYPA Transcription factor WRKY25 (Fragment)
           OS=Physcomitrella patens subsp. patens GN=WRKY25 PE=4
           SV=1
          Length = 58

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 36  RGYYKCSTVRLCLARKHVERALDDSSMLIVAYEGEHNH 149
           RGYYKCS++R CLARKHVER+L+DSSMLI+ YEGEHNH
Sbjct: 8   RGYYKCSSMRGCLARKHVERSLEDSSMLIITYEGEHNH 45