BP917250 |
Clone id |
YMU001_000098_C03 |
Library |
YMU01 |
Length |
481 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000098_C03. |
Accession |
BP917250 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATATGAAGCTTCAAGAGCATTTGACCTGCAAAATGTGGTTGTGAGCATACCCTTACCAG CCTTACGAGATTCCCCAGTTGTGAATCAAGTGGATGGTGATTGGAGGTATGATTCCCGGA AGTCGATTCTGGAGTGGAGTAAAGAATTGATTGATGATACCAATAGAAGTGGATCTATGG AATTTGTGGTACCAGCTGCAGACTCTACCGCTTTCTTTCCTATAGATGTCAAGTTCACGG CGTCAACAATTTACTGCGACATCAAGGTGCTAGCAGTTGTACCTTCCAGTGGTAAGGGTA CGTTGAAGTACAGCGGTAGTCGTCAACTTCTAGTGGACAGTTATCAAGTGGTTTAGTTGC TCCCGAGCACTGGATAAAATCCGGAGTTTCGTGCATTGCTGTAAATGTACCATAGTATGA GGAAGGTAACGGAGTAACAATTTCTTGAAATGGGTCCGCTCCATTTACTTAATCTGTGTC T |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0DJ99 |
Definition |
sp|Q0DJ99|COPD2_ORYSJ Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica |
Align length |
117 |
Score (bit) |
142.0 |
E-value |
1.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLU4 |
Definition |
tr|B8LLU4|B8LLU4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
117 |
Score (bit) |
172.0 |
E-value |
6.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917250|Adiantum capillus-veneris mRNA, clone: YMU001_000098_C03. (481 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLU4|B8LLU4_PICSI Putative uncharacterized protein OS=Picea... 172 6e-42 tr|A9RGU9|A9RGU9_PHYPA Predicted protein OS=Physcomitrella paten... 166 4e-40 tr|A9RMY5|A9RMY5_PHYPA Predicted protein OS=Physcomitrella paten... 164 2e-39 tr|A9RI77|A9RI77_PHYPA Predicted protein OS=Physcomitrella paten... 155 9e-37 tr|A7P2Q5|A7P2Q5_VITVI Chromosome chr1 scaffold_5, whole genome ... 149 5e-35 tr|A5B542|A5B542_VITVI Putative uncharacterized protein OS=Vitis... 149 5e-35 tr|Q9M640|Q9M640_MAIZE Delta-COP OS=Zea mays PE=2 SV=1 142 1e-32 tr|B8AWD9|B8AWD9_ORYSI Putative uncharacterized protein OS=Oryza... 142 1e-32 tr|A3B2G5|A3B2G5_ORYSJ Putative uncharacterized protein OS=Oryza... 142 1e-32 tr|A4RV57|A4RV57_OSTLU Predicted protein OS=Ostreococcus lucimar... 141 2e-32 tr|B7EGT8|B7EGT8_ORYSJ cDNA clone:J023027K10, full insert sequen... 140 2e-32 tr|A2ZZA4|A2ZZA4_ORYSJ Putative uncharacterized protein OS=Oryza... 140 2e-32 tr|B6TDR8|B6TDR8_MAIZE Coatomer subunit delta OS=Zea mays PE=2 SV=1 139 7e-32 tr|B4G0V4|B4G0V4_MAIZE Putative uncharacterized protein OS=Zea m... 139 7e-32 tr|B8BA91|B8BA91_ORYSI Putative uncharacterized protein OS=Oryza... 139 9e-32 tr|A3BSH8|A3BSH8_ORYSJ Putative uncharacterized protein OS=Oryza... 138 1e-31 tr|Q01BY3|Q01BY3_OSTTA Coatomer delta subunit (ISS) OS=Ostreococ... 131 1e-29 tr|A8I901|A8I901_CHLRE Delta-cop OS=Chlamydomonas reinhardtii GN... 130 2e-29 tr|B8ABP1|B8ABP1_ORYSI Putative uncharacterized protein OS=Oryza... 129 6e-29 tr|Q4RYQ9|Q4RYQ9_TETNG Chromosome 16 SCAF14974, whole genome sho... 97 4e-19 tr|B5X2H8|B5X2H8_SALSA Coatomer subunit delta OS=Salmo salar GN=... 97 5e-19 tr|Q91W48|Q91W48_MOUSE Archain 1 OS=Mus musculus GN=Arcn1 PE=2 SV=1 96 7e-19 tr|Q8R1S6|Q8R1S6_MOUSE Arcn1 protein (Fragment) OS=Mus musculus ... 96 7e-19 tr|Q3U4S9|Q3U4S9_MOUSE Putative uncharacterized protein OS=Mus m... 96 7e-19 tr|Q3TDU1|Q3TDU1_MOUSE Putative uncharacterized protein (Fragmen... 96 7e-19 tr|Q7ZU89|Q7ZU89_DANRE Archain 1 like OS=Danio rerio GN=arcn1l P... 96 9e-19 tr|Q28E96|Q28E96_XENTR Archain 1 (Archain) OS=Xenopus tropicalis... 95 2e-18 tr|Q6MZV5|Q6MZV5_HUMAN Putative uncharacterized protein DKFZp686... 95 2e-18 tr|B4E1X2|B4E1X2_HUMAN cDNA FLJ51620, highly similar to Coatomer... 95 2e-18 tr|B0YIW6|B0YIW6_HUMAN Coatomer subunit delta variant 2 (Archain... 95 2e-18
>tr|B8LLU4|B8LLU4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 529
Score = 172 bits (437), Expect = 6e-42 Identities = 82/117 (70%), Positives = 96/117 (82%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEAS FDLQNVV+SIPLPALRD P VNQVDGDWRYDSR+S+LEWS LID TNRSGSME Sbjct: 413 YEASEVFDLQNVVISIPLPALRDPPTVNQVDGDWRYDSRRSVLEWSIFLIDSTNRSGSME 472
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP AD ++FFPIDVKF+ + +CDIKV V+P +G LK++G QL+ +SYQVV Sbjct: 473 FVVPPADPSSFFPIDVKFSTAKTFCDIKVANVIPINGVSPLKFAGRTQLVTESYQVV 529
>tr|A9RGU9|A9RGU9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_104542 PE=4 SV=1 Length = 521
Score = 166 bits (421), Expect = 4e-40 Identities = 80/117 (68%), Positives = 95/117 (81%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEASRAFDLQN V+ IPLPALRD P VNQVDG+WRYDSR S+LEW+ LID++NRSGSME Sbjct: 405 YEASRAFDLQNTVIQIPLPALRDVPTVNQVDGEWRYDSRNSLLEWTITLIDNSNRSGSME 464
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVPAAD +FFPIDVKFT++ +CD+KV +VV T+K+ QL+VDSYQVV Sbjct: 465 FVVPAADPNSFFPIDVKFTSNKTFCDMKVGSVVECQSGNTVKFGRRTQLVVDSYQVV 521
>tr|A9RMY5|A9RMY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204046 PE=4 SV=1 Length = 521
Score = 164 bits (416), Expect = 2e-39 Identities = 78/117 (66%), Positives = 95/117 (81%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEASR+FDLQNVV+ IPLPA+RD P VNQ DG+WRYDSR S+LEW+ LID+TNRSGSME Sbjct: 405 YEASRSFDLQNVVIHIPLPAIRDVPTVNQADGEWRYDSRNSLLEWTITLIDNTNRSGSME 464
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVPAAD +FFPIDVKF+++ +CD+KV +VV + +K+ QLLVDSYQVV Sbjct: 465 FVVPAADPNSFFPIDVKFSSNKTFCDLKVGSVVQTQNGNAVKFGRRTQLLVDSYQVV 521
>tr|A9RI77|A9RI77_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159195 PE=4 SV=1 Length = 514
Score = 155 bits (392), Expect = 9e-37 Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 16/133 (12%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEASR F+LQNVV+ IPLPA+RD P VNQVDG+WRYDSR S+LEWS LID++NRSGSME Sbjct: 382 YEASRTFELQNVVIRIPLPAIRDVPAVNQVDGEWRYDSRNSVLEWSITLIDNSNRSGSME 441
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVL----------------AVVPSSGKGTLKYS 314 FVVPAAD +FFPIDVKFT++ +CD+KV +V+ + ++K+ Sbjct: 442 FVVPAADPNSFFPIDVKFTSNKTFCDLKVCVLMLDFFDVRVEGLVGSVIQTQSGNSVKFG 501
Query: 315 GSRQLLVDSYQVV 353 QL+VDSYQVV Sbjct: 502 KRTQLVVDSYQVV 514
>tr|A7P2Q5|A7P2Q5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030145001 PE=4 SV=1 Length = 568
Score = 149 bits (377), Expect = 5e-35 Identities = 72/117 (61%), Positives = 92/117 (78%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEAS FDL+NVV+S+PLPALR++P V Q+DG+WRYDSR SILEWS LID++NRSGSME Sbjct: 452 YEASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSME 511
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP ADS+ FFPI V+FTA+ + D+KV+ V+P G K+S L+ ++YQVV Sbjct: 512 FVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 568
>tr|A5B542|A5B542_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008875 PE=4 SV=1 Length = 531
Score = 149 bits (377), Expect = 5e-35 Identities = 72/117 (61%), Positives = 92/117 (78%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEAS FDL+NVV+S+PLPALR++P V Q+DG+WRYDSR SILEWS LID++NRSGSME Sbjct: 415 YEASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSME 474
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP ADS+ FFPI V+FTA+ + D+KV+ V+P G K+S L+ ++YQVV Sbjct: 475 FVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 531
>tr|Q9M640|Q9M640_MAIZE Delta-COP OS=Zea mays PE=2 SV=1 Length = 523
Score = 142 bits (357), Expect = 1e-32 Identities = 68/117 (58%), Positives = 88/117 (75%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEAS FDL NVV+SIPLPALR++P V Q+DG+W++DSR S+LEWS LID +NRSGSME Sbjct: 407 YEASEMFDLHNVVISIPLPALREAPSVRQIDGEWKFDSRNSVLEWSILLIDQSNRSGSME 466
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP AD ++FFPI V F+AS+ + D+KV ++P K+S +LL +YQVV Sbjct: 467 FVVPPADPSSFFPISVGFSASSTFSDLKVTGILPLKEGNPPKFSQRARLLTANYQVV 523
>tr|B8AWD9|B8AWD9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19411 PE=4 SV=1 Length = 607
Score = 142 bits (357), Expect = 1e-32 Identities = 68/117 (58%), Positives = 86/117 (73%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEA+ FDL NVV+SIPLPALR++P V Q+DG+WRYDSR S+LEWS LID +NRSGSME Sbjct: 491 YEAAEMFDLHNVVISIPLPALREAPSVRQIDGEWRYDSRNSVLEWSILLIDQSNRSGSME 550
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP AD + FFPI + F+AS+ + D+KV + P KYS +L+ +YQVV Sbjct: 551 FVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVTANYQVV 607
>tr|A3B2G5|A3B2G5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017237 PE=4 SV=1 Length = 1330
Score = 142 bits (357), Expect = 1e-32 Identities = 68/117 (58%), Positives = 86/117 (73%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEA+ FDL NVV+SIPLPALR++P V Q+DG+WRYDSR S+LEWS LID +NRSGSME Sbjct: 1214 YEAAEMFDLHNVVISIPLPALREAPSVRQIDGEWRYDSRNSVLEWSILLIDQSNRSGSME 1273
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP AD + FFPI + F+AS+ + D+KV + P KYS +L+ +YQVV Sbjct: 1274 FVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVTANYQVV 1330
Score = 140 bits (354), Expect = 2e-32 Identities = 67/117 (57%), Positives = 86/117 (73%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEA+ FDL NVV+SIPLPALR++P V Q+DG+W+YDSR S+LEWS LID +NRSGSME Sbjct: 693 YEAAEMFDLHNVVISIPLPALREAPSVRQIDGEWKYDSRNSVLEWSILLIDQSNRSGSME 752
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FVVP AD + FFPI + F+AS+ + D+KV + P KYS +L+ +YQVV Sbjct: 753 FVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVAANYQVV 809
>tr|A4RV57|A4RV57_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_94212 PE=4 SV=1 Length = 424
Score = 141 bits (355), Expect = 2e-32 Identities = 64/117 (54%), Positives = 88/117 (75%) Frame = +3
Query: 3 YEASRAFDLQNVVVSIPLPALRDSPVVNQVDGDWRYDSRKSILEWSKELIDDTNRSGSME 182 YEAS A DLQNVV+SIP P RD P VN DG++R+D+R ++EW+ ELIDD+NR+GSME Sbjct: 308 YEASDAMDLQNVVISIPCPPCRDPPAVNSCDGEFRFDARNGVMEWNIELIDDSNRNGSME 367
Query: 183 FVVPAADSTAFFPIDVKFTASTIYCDIKVLAVVPSSGKGTLKYSGSRQLLVDSYQVV 353 FV+P AD+ AFFPIDV F+++ +CDI+V ++ ++ + + G +LVDSYQVV Sbjct: 368 FVIPVADTEAFFPIDVHFSSAKTFCDIEVASISRTTDGAPVTFGGRTMMLVDSYQVV 424
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