BP917251 |
Clone id |
YMU001_000098_C04 |
Library |
YMU01 |
Length |
531 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000098_C04. |
Accession |
BP917251 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4174Contig1 |
Sequence |
GGTGTGCCCACACCAACTGGATGGCATTACCACCTCGAATCTTACGGCATAACAAAAGCA GCAGCGGCACCCTCTCCATTTGGGGGGACTACAACTCATATTCTCATTCCCGCGAAACAT GTCTACAGTACCCAAACCTAAAATCCAAAGAAACCAAGCTCACTTGCTCGTTCTTTCTCA AAAGTCTCAAAGTATTGGTAAATGATGGTGACAGCCAGTAATATCCCAGTTCCCGATCCA ATAGCCCCCATAAAATCCGCAACAACAGTTAAAGCACCAATGCACATTCCACCAAATGCA GCTGCTGTTGGGATGTAGCGGTTAAGTTCCTTTTGTAAATTTGACTCTCTATGGCCTGGC ATCACCATTTGTTGCTCCTTGAGCTGCTTAGCAACATCACGAGCTGACGACCCAGAAACT TCGATCCAAGTCTTTGAGAAAAGTGCACATGCAGTCAGCATGAAAACAAGATAGAAAAGA GCATGAAACGGATTTGCAGCAATTTCAGCCAAGCTTGAAGGGGGGGTGATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54XK2 |
Definition |
sp|Q54XK2|SC61A_DICDI Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum |
Align length |
129 |
Score (bit) |
202.0 |
E-value |
1.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKZ6 |
Definition |
tr|B8LKZ6|B8LKZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
130 |
Score (bit) |
255.0 |
E-value |
9.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917251|Adiantum capillus-veneris mRNA, clone: YMU001_000098_C04. (531 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKZ6|B8LKZ6_PICSI Putative uncharacterized protein OS=Picea... 255 9e-67 tr|A7R1K2|A7R1K2_VITVI Chromosome undetermined scaffold_359, who... 249 6e-65 tr|A7P222|A7P222_VITVI Chromosome chr19 scaffold_4, whole genome... 249 6e-65 tr|Q9SE40|Q9SE40_PHAVU Putative integral membrane protein OS=Pha... 248 1e-64 tr|A9PG45|A9PG45_POPTR Putative uncharacterized protein OS=Popul... 247 3e-64 tr|A9TUA0|A9TUA0_PHYPA Predicted protein OS=Physcomitrella paten... 245 9e-64 tr|Q9LP58|Q9LP58_ARATH Putative uncharacterized protein F28N24.2... 244 2e-63 tr|Q8RWJ5|Q8RWJ5_ARATH Putative uncharacterized protein At1g2931... 244 2e-63 tr|Q6ES90|Q6ES90_ORYSJ Putative Sec61 OS=Oryza sativa subsp. jap... 244 2e-63 tr|Q6ES11|Q6ES11_ORYSJ Os09g0347700 protein OS=Oryza sativa subs... 244 2e-63 tr|Q10Q18|Q10Q18_ORYSJ Os03g0213100 protein OS=Oryza sativa subs... 244 2e-63 tr|Q0J2F7|Q0J2F7_ORYSJ Os09g0347500 protein (Fragment) OS=Oryza ... 244 2e-63 tr|B8BEQ0|B8BEQ0_ORYSI Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|B8BEP9|B8BEP9_ORYSI Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|B8A2Y6|B8A2Y6_MAIZE Putative uncharacterized protein OS=Zea m... 244 2e-63 tr|B8A1R6|B8A1R6_MAIZE Putative uncharacterized protein OS=Zea m... 244 2e-63 tr|B4FL58|B4FL58_MAIZE Putative uncharacterized protein OS=Zea m... 244 2e-63 tr|A3BXT8|A3BXT8_ORYSJ Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|A3BXT7|A3BXT7_ORYSJ Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|A2XDW4|A2XDW4_ORYSI Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|A9SSP0|A9SSP0_PHYPA Predicted protein OS=Physcomitrella paten... 244 2e-63 tr|O80774|O80774_ARATH Putative uncharacterized protein At2g3425... 243 3e-63 tr|B6TIE9|B6TIE9_MAIZE Putative uncharacterized protein OS=Zea m... 241 2e-62 tr|Q94B06|Q94B06_HORVU Sec61 alpha subunit OS=Hordeum vulgare PE... 240 3e-62 tr|Q8LB07|Q8LB07_ARATH Putative uncharacterized protein OS=Arabi... 240 3e-62 tr|Q9LLR4|Q9LLR4_WHEAT Sec61p OS=Triticum aestivum GN=sec61 PE=2... 239 8e-62 tr|Q9ZV90|Q9ZV90_ARATH F9K20.24 protein OS=Arabidopsis thaliana ... 237 3e-61 tr|A4S7Q7|A4S7Q7_OSTLU IISP family transporter: protein transpor... 216 7e-55 tr|Q00UZ9|Q00UZ9_OSTTA Putative Sec61 alpha form 2 [Oryza sativa... 215 1e-54 tr|A8IEL6|A8IEL6_CHLRE SEC61-alpha subunit of ER-translocon OS=C... 208 1e-52
>tr|B8LKZ6|B8LKZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 478
Score = 255 bits (652), Expect = 9e-67 Identities = 127/130 (97%), Positives = 129/130 (99%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 ITPPSSLAE+AANPFHALFYL FMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH Sbjct: 349 ITPPSSLAEMAANPFHALFYLTFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 408
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGGMCIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 409 RESNLQKELNRYIPTAAAFGGMCIGALTVMADFMGAIGSGTGILLAVTIIYQYFETFEKE 468
Query: 170 RASELGFFGF 141 RASELGFFGF Sbjct: 469 RASELGFFGF 478
>tr|A7R1K2|A7R1K2_VITVI Chromosome undetermined scaffold_359, whole genome shotgun sequence (Chromosome undetermined scaffold_1001, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00005279001 PE=3 SV=1 Length = 476
Score = 249 bits (636), Expect = 6e-65 Identities = 123/130 (94%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 IT PSSLA++AANPFHALFYL+FML ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH Sbjct: 347 ITAPSSLADMAANPFHALFYLIFMLAACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 406
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RE+NLQKELNRYIPTAAAFGGMCIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 407 REANLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 466
Query: 170 RASELGFFGF 141 RASELGFFGF Sbjct: 467 RASELGFFGF 476
>tr|A7P222|A7P222_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027847001 PE=3 SV=1 Length = 476
Score = 249 bits (636), Expect = 6e-65 Identities = 123/130 (94%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 IT PSSLA++AANPFHALFYL+FML ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH Sbjct: 347 ITAPSSLADMAANPFHALFYLIFMLAACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 406
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RE+NLQKELNRYIPTAAAFGGMCIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 407 REANLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 466
Query: 170 RASELGFFGF 141 RASELGFFGF Sbjct: 467 RASELGFFGF 476
>tr|Q9SE40|Q9SE40_PHAVU Putative integral membrane protein OS=Phaseolus vulgaris GN=sec61 PE=2 SV=1 Length = 476
Score = 248 bits (634), Expect = 1e-64 Identities = 123/130 (94%), Positives = 129/130 (99%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 IT PSSLA++AANPFHALFYLVFML+ACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGH Sbjct: 347 ITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGH 406
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 407 RESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 466
Query: 170 RASELGFFGF 141 RASELGFFGF Sbjct: 467 RASELGFFGF 476
>tr|A9PG45|A9PG45_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 476
Score = 247 bits (630), Expect = 3e-64 Identities = 122/130 (93%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 IT PSSLA++AANPFHALFY VFML+ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH Sbjct: 347 ITAPSSLADMAANPFHALFYFVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 406
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 407 RESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 466
Query: 170 RASELGFFGF 141 +ASELGFFGF Sbjct: 467 KASELGFFGF 476
>tr|A9TUA0|A9TUA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225537 PE=3 SV=1 Length = 477
Score = 245 bits (626), Expect = 9e-64 Identities = 120/130 (92%), Positives = 125/130 (96%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 ITPP+SL +I NPFHA+FYL FMLTACALFSKTWIEVSGSSARDVAKQLKEQQM MPGH Sbjct: 348 ITPPTSLGDIITNPFHAIFYLTFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMFMPGH 407
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQ+ELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETF+KE Sbjct: 408 RESNLQRELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFDKE 467
Query: 170 RASELGFFGF 141 RASELGFFGF Sbjct: 468 RASELGFFGF 477
>tr|Q9LP58|Q9LP58_ARATH Putative uncharacterized protein F28N24.2 OS=Arabidopsis thaliana GN=At1g29310 PE=3 SV=1 Length = 475
Score = 244 bits (624), Expect = 2e-63 Identities = 120/130 (92%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 IT P+S A++AA+PFHALFY+VFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH Sbjct: 346 ITAPASFADMAAHPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 405
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 406 RESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 465
Query: 170 RASELGFFGF 141 +ASELGFFGF Sbjct: 466 KASELGFFGF 475
>tr|Q8RWJ5|Q8RWJ5_ARATH Putative uncharacterized protein At1g29310 OS=Arabidopsis thaliana GN=At1g29310 PE=2 SV=1 Length = 475
Score = 244 bits (624), Expect = 2e-63 Identities = 120/130 (92%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 IT P+S A++AA+PFHALFY+VFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH Sbjct: 346 ITAPASFADMAAHPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 405
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 406 RESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 465
Query: 170 RASELGFFGF 141 +ASELGFFGF Sbjct: 466 KASELGFFGF 475
>tr|Q6ES90|Q6ES90_ORYSJ Putative Sec61 OS=Oryza sativa subsp. japonica GN=P0512H04.19 PE=3 SV=1 Length = 337
Score = 244 bits (624), Expect = 2e-63 Identities = 119/130 (91%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 +T PSSLA++ ANPFHALFY+VFML+ACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGH Sbjct: 208 VTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGH 267
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 268 RESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 327
Query: 170 RASELGFFGF 141 RA+ELGFFGF Sbjct: 328 RATELGFFGF 337
>tr|Q6ES11|Q6ES11_ORYSJ Os09g0347700 protein OS=Oryza sativa subsp. japonica GN=P0698G06.1 PE=2 SV=1 Length = 475
Score = 244 bits (624), Expect = 2e-63 Identities = 119/130 (91%), Positives = 128/130 (98%) Frame = -2
Query: 530 ITPPSSLAEIAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGH 351 +T PSSLA++ ANPFHALFY+VFML+ACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGH Sbjct: 346 VTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGH 405
Query: 350 RESNLQKELNRYIPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKE 171 RESNLQKELNRYIPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE Sbjct: 406 RESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 465
Query: 170 RASELGFFGF 141 RA+ELGFFGF Sbjct: 466 RATELGFFGF 475
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