BP917260 |
Clone id |
YMU001_000098_D06 |
Library |
YMU01 |
Length |
504 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000098_D06. |
Accession |
BP917260 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2353Contig1 |
Sequence |
CATACAGTGACATATTCATGTACGCTTTCTTTCATTCCTGGCCAATAGACTCCCAATTGT AACAAATTCCTATATGTGGTCCTTCTTGAACAATGAAATGTACATGCCTGAACATGTGCT TCGCGCAGATATATATTATATTTCTCAGGATTGATGCATAGTCATAAAACATGATCATTT CCCAATTGATACAACCTTCCTGCAACCAATTGAAGATTCTTGGATTGCTGAATAGCAATA TGTTTCTGGTTGTATTCTCTTTTATCAAATTCTCCTCCATAGGTTAATAGGTTAACGACA TTTTGAGACCACTTCGGTATCATTTCTATGTTGAACAAGTACGTGTCTGGCATGTCGTCA TCTACTCCTATAGGGTCTTCTCCATTCGTCAATCGCGAAAGATGATCAGCTCTAAGATGT GTTTTTCCTTTCTTTACTACTACCGTGAATTCGAACTCCAATAAGATAATGAACCATCTC ACTATTCTTCCGGTATTGCATGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UR07 |
Definition |
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe |
Align length |
161 |
Score (bit) |
39.7 |
E-value |
0.008 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0ZCB7 |
Definition |
tr|Q0ZCB7|Q0ZCB7_POPTR Integrase OS=Populus trichocarpa |
Align length |
161 |
Score (bit) |
88.2 |
E-value |
2.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917260|Adiantum capillus-veneris mRNA, clone: YMU001_000098_D06. (504 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0ZCB7|Q0ZCB7_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 88 2e-16 tr|A5BJD2|A5BJD2_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|A5C7Z0|A5C7Z0_VITVI Putative uncharacterized protein OS=Vitis... 78 2e-13 tr|A5C086|A5C086_VITVI Putative uncharacterized protein OS=Vitis... 78 2e-13 tr|A5C647|A5C647_VITVI Putative uncharacterized protein OS=Vitis... 77 5e-13 tr|A5AYT6|A5AYT6_VITVI Putative uncharacterized protein OS=Vitis... 77 5e-13 tr|A5AWD1|A5AWD1_VITVI Putative uncharacterized protein OS=Vitis... 77 5e-13 tr|A5BB70|A5BB70_VITVI Putative uncharacterized protein OS=Vitis... 77 6e-13 tr|A5BCK1|A5BCK1_VITVI Putative uncharacterized protein OS=Vitis... 76 8e-13 tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus ... 76 1e-12 tr|A5BVM1|A5BVM1_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|A5B854|A5B854_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|A5ATF8|A5ATF8_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|A5BRS7|A5BRS7_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5BDP7|A5BDP7_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5B7K5|A5B7K5_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5B147|A5B147_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5AZ01|A5AZ01_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5AYI6|A5AYI6_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5AFI3|A5AFI3_VITVI Putative uncharacterized protein OS=Vitis... 75 1e-12 tr|A5BXM1|A5BXM1_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|A5BFS9|A5BFS9_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|A5BDW3|A5BDW3_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|A5BAE8|A5BAE8_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|A5B504|A5B504_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|A5AEM1|A5AEM1_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|A5BG10|A5BG10_VITVI Putative uncharacterized protein (Fragmen... 74 3e-12 tr|A5BTT2|A5BTT2_VITVI Putative uncharacterized protein OS=Vitis... 74 4e-12 tr|A5C6R3|A5C6R3_VITVI Putative uncharacterized protein OS=Vitis... 74 5e-12 tr|A5BQ47|A5BQ47_VITVI Putative uncharacterized protein OS=Vitis... 74 5e-12
>tr|Q0ZCB7|Q0ZCB7_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 Length = 1332
Score = 88.2 bits (217), Expect = 2e-16 Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 2/161 (1%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGE--DPIGVDDDMPDTYLFNIEMIP 315 R+V W ++L EF+ T+ KKG ++ ADHLSRLT D ++D PD LF++ +P Sbjct: 707 RLVWWILLLQEFDITIKDKKGTENVVADHLSRLTTDSRTDITPINDYFPDESLFSVSTMP 766
Query: 314 KWSQNVVNLLTYGGEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCINPEKYN 135 W N+VN L G K + + KN L++ D + CI + + Sbjct: 767 -WYANIVNFLVSGQLPAHWSTQDKRKFLNKVKNFYWDDPYLFKYYPDQIFRRCIPDNEVS 825
Query: 134 IYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHEY 12 ++ H +AC H S R T +LQ G YWP M + H + Sbjct: 826 SVIKFCHSEACGGHFSSRKTTAKILQSGFYWPTMFKDSHAF 866
>tr|A5BJD2|A5BJD2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020846 PE=4 SV=1 Length = 1791
Score = 80.5 bits (197), Expect = 4e-14 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 2/154 (1%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLT--NGEDPIGVDDDMPDTYLFNIEMIP 315 R++RW ++L EF + K+G ++ ADHLSR+ + + ++D+ PD L +E +P Sbjct: 1301 RLIRWILLLQEFNIQIKDKQGVENVVADHLSRVKVESHFEEAQINDEFPDDALCAVEKLP 1360
Query: 314 KWSQNVVNLLTYGGEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCINPEKYN 135 W N+VN L G + K + ++K+ LY+ D ++ C+ ++ Sbjct: 1361 -WFANIVNYLATGELPSEWNMETKKYFLSRAKHYAWDDPYLYKFCPDQIMRRCVPEDEQQ 1419
Query: 134 IYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGM 33 LR H AC H + R T +LQ G YWP M Sbjct: 1420 DILRMCHEGACGGHFASRKTSAKILQSGFYWPTM 1453
>tr|A5C7Z0|A5C7Z0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009204 PE=4 SV=1 Length = 452
Score = 78.2 bits (191), Expect = 2e-13 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +E +P Sbjct: 76 RLIRWILLLQEFNLQIKDKKGVENVVADHLSRLNIAHDTHGLPINDDFPEESLMLVEEVP 135
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DK+ + K A + L++ D ++ C+ Sbjct: 136 -WFAHIANYLVTGEIPSEWSSQDKKNFFAKVHAYYWEEPF------LFKYCADQIIRKCV 188
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHE 15 ++ + L H AC H + T +LQLG +WP + + HE Sbjct: 189 PEQEKHGILSHCHGNACGGHFXSQKTTMRVLQLGFWWPSLFKDAHE 234
>tr|A5C086|A5C086_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036087 PE=4 SV=1 Length = 1418
Score = 78.2 bits (191), Expect = 2e-13 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +E +P Sbjct: 1200 RLIRWILLLQEFNLQIRDKKGVENVVADHLSRLNIAHDTHGLPINDDFPEESLMLVEEVP 1259
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DK+ + K A + L++ D ++ C+ Sbjct: 1260 -WFAHIANYLVTGEIPSEWSSQDKKNFFAKVHAYYWEEPF------LFKYCADQIIRKCV 1312
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHE 15 ++ + L H AC H + R T +LQ G +WP + + HE Sbjct: 1313 PEQEKHGILSHCHENACGGHFASRKTAMRVLQSGFWWPSLFKDAHE 1358
>tr|A5C647|A5C647_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019683 PE=4 SV=1 Length = 2103
Score = 77.0 bits (188), Expect = 5e-13 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +IE+ P Sbjct: 1320 RLIRWILLLQEFNLQIRDKKGVENVVADHLSRLVISHDSHGLPINDDFPEESLMSIEVAP 1379
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DKR + K A + L++ D ++ C+ Sbjct: 1380 -WYSHIANFLVTGEVPSEWSAQDKRHFFAKIHAYYWEEPF------LFKYCADQIIRKCV 1432
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVH 18 ++ + L H AC H + + T ++Q G +WP + + H Sbjct: 1433 PEQEQSGILSHCHDSACGGHFASQKTAMKVIQSGFWWPSLFKDAH 1477
>tr|A5AYT6|A5AYT6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033133 PE=4 SV=1 Length = 1897
Score = 77.0 bits (188), Expect = 5e-13 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 8/166 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +E +P Sbjct: 1285 RLIRWILLLQEFNLQIXDKKGVENVVADHLSRLNIAHDTHGLPINDDFPEESLMPVEEVP 1344
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DK+ + K A + L++ D ++ C+ Sbjct: 1345 -WFAHISNYLVTGEIPSEWSSQDKKNFFAKVHAYYWEEPF------LFKYCADQIIRKCV 1397
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHE 15 ++ + L H AC H + + T +LQ G +WP + + HE Sbjct: 1398 PEQEKHGILSHCHENACGGHFASQKTAMRVLQSGFWWPSLFKDAHE 1443
>tr|A5AWD1|A5AWD1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028047 PE=4 SV=1 Length = 1817
Score = 77.0 bits (188), Expect = 5e-13 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 8/166 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +E +P Sbjct: 1343 RLIRWILLLQEFNLQIRDKKGVENVVADHLSRLNIAHDTHGLPINDDFPEESLMLVEEVP 1402
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DK+ + K A + L++ D ++ C+ Sbjct: 1403 -WFAHIANYLVTGEIPSEWSSQDKKNFFAKVHAYYWEEPF------LFKYCADQIIRKCV 1455
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHE 15 ++ + L H AC H + + T +LQ G +WP + + HE Sbjct: 1456 PEQEKHGILSHCHXNACGGHFASQKTAMRVLQSGFWWPSLFKDAHE 1501
>tr|A5BB70|A5BB70_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020252 PE=4 SV=1 Length = 931
Score = 76.6 bits (187), Expect = 6e-13 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 8/166 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +E +P Sbjct: 391 RLIRWILLLQEFNLQIRDKKGVENVVADHLSRLNIAHDTHGLPINDDFPEESLMLVEEVP 450
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DK+ + K A + L++ D ++ C+ Sbjct: 451 -WFAHIANYLVTGEIPSEWSSQDKKNFFAKVHAYYWEEPF------LFKYCADQIIRKCV 503
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHE 15 ++ + L H AC H + + T +LQ G +WP + + HE Sbjct: 504 PEQEKHGILSHCHENACGGHFASQKTAMRVLQSGFWWPSLFKDAHE 549
>tr|A5BCK1|A5BCK1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003687 PE=4 SV=1 Length = 1593
Score = 76.3 bits (186), Expect = 8e-13 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNGEDPIG--VDDDMPDTYLFNIEMIP 315 R++RW ++L EF + KKG ++ ADHLSRL D G ++DD P+ L +I++ P Sbjct: 1105 RLIRWILLLQEFNLQIRDKKGVENVVADHLSRLVIAHDSHGLPINDDFPEESLMSIDVAP 1164
Query: 314 KWSQNVVNLLTYG------GEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCI 153 W ++ N L G DKR + K A K L++ D ++ C+ Sbjct: 1165 -WYSHIANFLVTGEVPSEWSAQDKRHFFAKIHAYYWEKPF------LFKYCADQIIRKCV 1217
Query: 152 NPEKYNIYLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVH 18 ++ + L H AC H + + T ++Q G +WP + + H Sbjct: 1218 PKQEQSGILSHCHDSACGGHFASQKTAMKVIQSGFWWPSLFKDGH 1262
>tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1 Length = 1788
Score = 75.9 bits (185), Expect = 1e-12 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 1/160 (0%) Frame = -2
Query: 488 RIVRWFIILLEFEFTVVVKKGKTHLRADHLSRLTNG-EDPIGVDDDMPDTYLFNIEMIPK 312 R++RW ++L EF+ ++ ++G + ADHLSRL N + +++ PD L I+ +P Sbjct: 1235 RLIRWILLLQEFDIQILDRRGTENPVADHLSRLPNAPTSTVPINEHFPDEQLLEIQSVP- 1293
Query: 311 WSQNVVNLLTYGGEFDKREYNQKHIAIQQSKNLQLVAGRLYQLGNDHVL*LCINPEKYNI 132 W ++VN + + + Q K L++ D + C+ E+ Sbjct: 1294 WFADIVNYIVMNQIPSHWSKQDRSRFLSQVKYFYWDDPYLFKYCPDQIFRRCVPTEETRS 1353
Query: 131 YLREAHVQACTFHCSRRTTYRNLLQLGVYWPGMKESVHEY 12 L H QAC H R T +LQ G+YWP + + E+ Sbjct: 1354 VLSFCHEQACGGHFGPRKTAEKVLQSGLYWPTLFKDSFEF 1393
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