BP917264
Clone id YMU001_000098_E01
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATAATACACACAACAAACAAGCTCTCGTAGATCCAGAAGATGGCCATGGCTTCGTCTTCC
TCAAATCAAGAAACCCATCTCTACATCTCTCTTCTCTCTACGGCTTCTGTGGCTTCCCAC
AGCACGCCATCGCCATCGTTGCGTATCAGCGTAAAAGCTCCACTCCTGGCTCTCTCCCTG
CTTCTCTTTGTGGCCTGCATTGCCTTCACAAAACCCGCCTTCTTACGCCTCTCTGAGTCA
CCATCTAAAAGCTCCCCTGTTCCCTCTCATGGCACCGCCAAGACCACATCAGTTGGGTCT
CACCTCAACTCGGCAATCAAGACCAACTCAACTCATGGGTCGTCTCCATCTATGCAAAGA
AAAAGTGGGTCTTATGCAGAACTTGTGCATAAGCACAAGACATTATCTGGGTCTGAGATC
TACCTCAAACAAGCTGGGGAAGATGCCTCTTTCTATCAACCGAAAAGCACGGTTCCCACC
ATCTTTTCTGAGGACGGCCGATTATACTCTCCATGGAACA
■■Homology search results ■■ -
sp_hit_id A8G1J1
Definition sp|A8G1J1|PPCK_SHESH Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sediminis (strain HAW-EB3)
Align length 56
Score (bit) 33.9
E-value 0.48
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917264|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_E01.
(520 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8G1J1|PPCK_SHESH Phosphoenolpyruvate carboxykinase [ATP] OS=... 34 0.48
sp|A3QJ41|PPCK_SHELP Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.62
sp|Q089V1|PPCK_SHEFN Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.62
sp|A1RPC2|PPCK_SHESW Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|Q0I0F2|PPCK_SHESR Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|Q0HNY4|PPCK_SHESM Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|A0KRH2|PPCK_SHESA Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|A4YBE7|PPCK_SHEPC Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|Q8EKD3|PPCK_SHEON Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|A9KVC7|PPCK_SHEB9 Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|A6WHM7|PPCK_SHEB8 Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|A3DAB2|PPCK_SHEB5 Phosphoenolpyruvate carboxykinase [ATP] OS=... 33 0.81
sp|Q9HBL0|TENS1_HUMAN Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2 32 1.4
sp|A8GYT2|PPCK_SHEPA Phosphoenolpyruvate carboxykinase [ATP] OS=... 32 1.4
sp|B0TMY0|PPCK_SHEHH Phosphoenolpyruvate carboxykinase [ATP] OS=... 32 1.4
sp|A1S1X0|PPCK_SHEAM Phosphoenolpyruvate carboxykinase [ATP] OS=... 32 1.8
sp|Q2SPF9|PPCK_HAHCH Phosphoenolpyruvate carboxykinase [ATP] OS=... 31 3.1
sp|O70361|PER3_MOUSE Period circadian protein homolog 3 OS=Mus m... 31 3.1
sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo ... 31 3.1
sp|Q3KJP4|PPCK_PSEPF Phosphoenolpyruvate carboxykinase [ATP] OS=... 31 4.0
sp|Q4KK03|PPCK_PSEF5 Phosphoenolpyruvate carboxykinase [ATP] OS=... 31 4.0
sp|P38867|YHX7_YEAST Uncharacterized protein YHR177W OS=Saccharo... 30 6.9
sp|Q3B7U2|TAF1A_RAT TATA box-binding protein-associated factor R... 30 6.9
sp|A4FUG8|RABE2_BOVIN Rab GTPase-binding effector protein 2 OS=B... 30 6.9
sp|A4XP75|PPCK_PSEMY Phosphoenolpyruvate carboxykinase [ATP] OS=... 30 6.9
sp|Q99PP2|ZN318_MOUSE Zinc finger protein 318 (Fragment) OS=Mus ... 30 9.0
sp|Q3ILP3|PPCK_PSEHT Phosphoenolpyruvate carboxykinase [ATP] OS=... 30 9.0
sp|Q9HTZ7|PPCK_PSEAE Phosphoenolpyruvate carboxykinase [ATP] OS=... 30 9.0
sp|Q02EH2|PPCK_PSEAB Phosphoenolpyruvate carboxykinase [ATP] OS=... 30 9.0
sp|A6VDW7|PPCK_PSEA7 Phosphoenolpyruvate carboxykinase [ATP] OS=... 30 9.0

>sp|A8G1J1|PPCK_SHESH Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella sediminis (strain HAW-EB3) GN=pckA PE=3
SV=1
Length = 513

Score = 33.9 bits (76), Expect = 0.48
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S +SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEMGSSSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|A3QJ41|PPCK_SHELP Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4)
GN=pckA PE=3 SV=1
Length = 513

Score = 33.5 bits (75), Expect = 0.62
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEMGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|Q089V1|PPCK_SHEFN Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella frigidimarina (strain NCIMB 400) GN=pckA
PE=3 SV=1
Length = 513

Score = 33.5 bits (75), Expect = 0.62
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEMGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|A1RPC2|PPCK_SHESW Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella sp. (strain W3-18-1) GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|Q0I0F2|PPCK_SHESR Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella sp. (strain MR-7) GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|Q0HNY4|PPCK_SHESM Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella sp. (strain MR-4) GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|A0KRH2|PPCK_SHESA Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella sp. (strain ANA-3) GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|A4YBE7|PPCK_SHEPC Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|Q8EKD3|PPCK_SHEON Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella oneidensis GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>sp|A9KVC7|PPCK_SHEB9 Phosphoenolpyruvate carboxykinase [ATP]
OS=Shewanella baltica (strain OS195) GN=pckA PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 0.81
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEIGSTSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


tr_hit_id Q1DSB0
Definition tr|Q1DSB0|Q1DSB0_COCIM Putative uncharacterized protein OS=Coccidioides immitis
Align length 65
Score (bit) 36.2
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917264|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_E01.
(520 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1DSB0|Q1DSB0_COCIM Putative uncharacterized protein OS=Cocci... 36 1.00
tr|Q1MCX7|Q1MCX7_RHIL3 Putative phytochrome/sensor histidine kin... 35 2.2
tr|Q5VPU4|Q5VPU4_ORYSJ Putative uncharacterized protein P0450D12... 35 2.9
tr|Q20293|Q20293_CAEEL Putative uncharacterized protein OS=Caeno... 34 3.8
tr|B6MI68|B6MI68_BRAFL Putative uncharacterized protein OS=Branc... 34 3.8
tr|B6MI57|B6MI57_BRAFL Putative uncharacterized protein OS=Branc... 34 3.8
tr|A4RK85|A4RK85_MAGGR Putative uncharacterized protein OS=Magna... 34 3.8
tr|B1KN33|B1KN33_SHEWM Phosphoenolpyruvate carboxykinase (ATP) O... 34 5.0
tr|A5E2G2|A5E2G2_LODEL Putative uncharacterized protein OS=Lodde... 34 5.0
tr|Q47IJ2|Q47IJ2_DECAR Phosphorylase OS=Dechloromonas aromatica ... 33 6.5
tr|Q5KM79|Q5KM79_CRYNE Putative uncharacterized protein OS=Crypt... 33 6.5
tr|Q1ASW5|Q1ASW5_RUBXD Alpha-1,2-mannosidase, putative OS=Rubrob... 33 8.5
tr|B8E3X7|B8E3X7_9GAMM Phosphoenolpyruvate carboxykinase (ATP) O... 33 8.5
tr|B0JBS9|B0JBS9_RHILT Response regulator receiver protein OS=Rh... 33 8.5
tr|A2V2N2|A2V2N2_SHEPU Phosphoenolpyruvate carboxykinase (ATP) O... 33 8.5
tr|Q8H5R2|Q8H5R2_ORYSJ Putative uncharacterized protein OJ1341_A... 33 8.5
tr|B2BY56|B2BY56_HALGR Amelogenin (Fragment) OS=Halichoerus gryp... 33 8.5
tr|Q4WKI1|Q4WKI1_ASPFU Alpha/beta hydrolase, putative OS=Aspergi... 33 8.5

>tr|Q1DSB0|Q1DSB0_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_06803 PE=4 SV=1
Length = 350

Score = 36.2 bits (82), Expect = 1.00
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1

Query: 283 TTSVGSHLNSAIKTNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAGEDASFYQP 462
TTS S N NSTH PS + S A K L+G+ +YLK +G+D+
Sbjct: 235 TTSKSSQGNHTSTVNSTHDEKPSQDQGESSPAPASSK---LTGTCVYLKGSGKDSRTSST 291

Query: 463 KSTVP 477
+ VP
Sbjct: 292 STIVP 296


>tr|Q1MCX7|Q1MCX7_RHIL3 Putative phytochrome/sensor histidine kinase
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=RL3714 PE=4 SV=1
Length = 855

Score = 35.0 bits (79), Expect = 2.2
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2

Query: 263 PLMAPPRPHQLGLTSTRQSRPTQLMGRLHLCKEKVGLMQNLCISTRHYLGLRSTSNKLGK 442
P + P+ H G T R+S P L G+ + K GL + CI RH +G TS +
Sbjct: 662 PPVVEPKRHGFGSTIIRRSIPYDLGGKAEVRYVKDGLEADFCIPARHVVG--PTSERSNP 719

Query: 443 MPL 451
P+
Sbjct: 720 APV 722


>tr|Q5VPU4|Q5VPU4_ORYSJ Putative uncharacterized protein P0450D12.21
OS=Oryza sativa subsp. japonica GN=P0450D12.21 PE=4 SV=1
Length = 136

Score = 34.7 bits (78), Expect = 2.9
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2

Query: 279 GGAMRGNRGAFRW*LREA*-EGGFCEGNAGHKEKQGESQEWSFYADTQRWRWRAVGSHRS 103
GG RG R RW RE EGG EG + G + E + A +R RWR + R
Sbjct: 47 GGRWRGRRRGGRWRGREGGGEGGGEEGGGEVEAAVGRAAEMAERAVVKRSRWRRIWIERE 106

Query: 102 RRE 94
R E
Sbjct: 107 RDE 109


>tr|Q20293|Q20293_CAEEL Putative uncharacterized protein
OS=Caenorhabditis elegans GN=F41G3.2 PE=2 SV=1
Length = 320

Score = 34.3 bits (77), Expect = 3.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1

Query: 280 KTTSVGSHLNSAIKTNSTHGSSPSMQRKSGSYAELVHKHKTLSG 411
K+ HL+ A N+ +GS P QRK GSY +H H++ G
Sbjct: 142 KSVESSYHLSGAYG-NANYGSMPRAQRKPGSYQPQMHDHRSQDG 184


>tr|B6MI68|B6MI68_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_82694 PE=4 SV=1
Length = 1679

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2

Query: 176 PCFSLWPALPSQNPPSYASLSHHLKAPLFPLMAPPRPH 289
P PA+P P+Y+ + H+ A PL APP H
Sbjct: 1279 PSIGALPAVPHSTEPTYSEIPDHIAAAQRPLPAPPHTH 1316


>tr|B6MI57|B6MI57_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_82683 PE=4 SV=1
Length = 720

Score = 34.3 bits (77), Expect = 3.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2

Query: 176 PCFSLWPALPSQNPPSYASLSHHLKAPLFPLMAPPRPH 289
P PA+P P+Y+ + H+ A PL APP H
Sbjct: 390 PSIGALPAVPHSTEPTYSEIPDHIAAAQRPLPAPPHTH 427


>tr|A4RK85|A4RK85_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_01578 PE=4 SV=1
Length = 511

Score = 34.3 bits (77), Expect = 3.8
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2

Query: 74 PISTSLFSLRLLWLPTARHRHRCVSA*KLHSWLSPC---FSLWPALPSQNPPSYASLSHH 244
P+ LFS R L +RH HR SPC FSL P LP+ N ++A S
Sbjct: 44 PLPLRLFSTRAGVLQPSRHSHR-----------SPCAFFFSL-PRLPTINKTTFACQS-- 89

Query: 245 LKAPLFPLMAPPRPHQLG 298
L A LF +PP +LG
Sbjct: 90 LSARLFERRSPPPSVRLG 107


>tr|B1KN33|B1KN33_SHEWM Phosphoenolpyruvate carboxykinase (ATP)
OS=Shewanella woodyi (strain ATCC 51908 / MS32)
GN=Swoo_4740 PE=4 SV=1
Length = 513

Score = 33.9 bits (76), Expect = 5.0
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1

Query: 274 TAKTTSVGSHLNSAIK-TNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAG 438
TAK S +SAI+ T ST +P R +G YAEL+ K GS++YL G
Sbjct: 359 TAKVGSTEMGSSSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTG 414


>tr|A5E2G2|A5E2G2_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_03799 PE=4 SV=1
Length = 918

Score = 33.9 bits (76), Expect = 5.0
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1

Query: 319 KTNSTHGSSPSMQRKSGSYAELVHKHKTLSGSEIYLKQAGEDASFYQPKSTVPTIFSEDG 498
KT G+SP + SG YA L +H+T S + + G++ + Y P T T+ S G
Sbjct: 804 KTMLPVGNSPYVPNASGPYAPLSQQHRTHSRAASLVGGRGKEVNPYAPVLT--TVQSGVG 861

Query: 499 RLYSP 513
YSP
Sbjct: 862 VQYSP 866


>tr|Q47IJ2|Q47IJ2_DECAR Phosphorylase OS=Dechloromonas aromatica
(strain RCB) GN=Daro_0582 PE=3 SV=1
Length = 856

Score = 33.5 bits (75), Expect = 6.5
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2

Query: 92 FSLRLLWLPTARHRHRCVSA*KLHSWLSP--CFSLWPA-LPSQNPPSYASLSHHLKAPLF 262
F++ L L +RH H VS ++H +S C LWP LP +NP Y + HL L
Sbjct: 360 FNMTALALRGSRH-HNGVS--RIHGDVSADICRYLWPQILPEENPMDYVTNGVHLPTFLA 416

Query: 263 PLMAPPRPHQLGL-TSTRQSRP 325
P H LG+ RQ++P
Sbjct: 417 PEWFETFEHYLGIGWQERQTQP 438