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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917267
Clone id YMU001_000098_E07
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGAGCGGATACTGAAGTCAGTCATGGAGACAATGCCATCGGATGTAAGGTCCAGTGTCT
TGCATGTGCAAGGCAGAGAACGTATTTGCAAGGAGTTGCAGGCAAAGTTCAATGCTGCTC
TGCCATCCCAGCGAATTGCAAGCACTAAAGTGCTTGGCATGTTTGGTATTGGAGGAGCAG
GCAAGAGCACAGCATGTATGCTGATTACGGAATCCATGAGGAAGGCATTTTCTGGCAGAG
TTTGTCATGTAGAATTTAAACCAGATACTAGCACATTGAAACTACAATGCACAGTGCTCA
GGGAGCTCATCAGAGACAATGAAGTTTTTCTTGACAGGCATATGACTAATGAGCATAAGG
TGGGATAATGCGAAATGTCTCTCTTTCTAGTTCTTAATCAAGAATGGGCTTCACTGGTTT
GGGCAAAAGGTCTTAGGCTATCAAAGGAATGACTAAAACATTTACAGAAGTGAACAAAGA
GCCTGGCAGAAAGCCTGCATGATAATCATTCTGCCTGATTGCTGGTTGCTGTTTTATGTG
GAGAAAGCTT
■■Homology search results ■■ -
sp_hit_id P42490
Definition sp|P42490|KTHY_ASFB7 Thymidylate kinase OS=African swine fever virus (strain Badajoz 1971 Vero-adapted)
Align length 95
Score (bit) 34.7
E-value 0.31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917267|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_E07.
         (550 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42490|KTHY_ASFB7 Thymidylate kinase OS=African swine fever v...    35   0.31 
sp|P0C8G2|KTHY_ASFWA Thymidylate kinase OS=African swine fever v...    33   0.91 
sp|P25941|AFSR_STRCO Regulatory protein afsR OS=Streptomyces coe...    32   1.5  
sp|Q9LVT4|DRL37_ARATH Probable disease resistance protein At5g47...    31   3.4  
sp|P18770|CYAB_BORPE Cyclolysin secretion/processing ATP-binding...    31   3.4  
sp|P11641|Y32K_MCMV Uncharacterized 32.7 kDa protein OS=Maize ch...    31   4.5  
sp|Q8BUR4|DOCK1_MOUSE Dedicator of cytokinesis protein 1 OS=Mus ...    31   4.5  
sp|Q9CP98|RBSA1_PASMU Ribose import ATP-binding protein rbsA 1 O...    30   5.9  
sp|P21441|MDR_LEITA Multidrug resistance protein OS=Leishmania t...    30   5.9  
sp|Q65WJ1|ARAG_MANSM Arabinose import ATP-binding protein araG O...    30   5.9  
sp|Q58DD9|GPN2_BOVIN GPN-loop GTPase 2 OS=Bos taurus GN=GPN2 PE=...    30   7.7  
sp|Q779J8|DPOL_SFAVA DNA polymerase OS=Spodoptera frugiperda asc...    30   7.7  

>sp|P42490|KTHY_ASFB7 Thymidylate kinase OS=African swine fever
           virus (strain Badajoz 1971 Vero-adapted) GN=TMK PE=3
           SV=1
          Length = 240

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
 Frame = +3

Query: 165 GIGGAGKSTACMLITESMRKAFSGRVCHVEFKPDTSTLKLQCTVLRELIRDNEVFLDRHM 344
           GI G GKST  M + +++       VC     PDT+T  L   VL ++   +   L +  
Sbjct: 10  GINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGGLILQVLNKMTEMSSEQLHKLF 69

Query: 345 TNEHKVG*CEMSLFLVLN-------QEWASLVWAK 428
           T  H     E++  L LN         W+ L +A+
Sbjct: 70  TKHHSEFSAEIAALLKLNFIVIVDHYIWSGLAYAQ 104


>sp|P0C8G2|KTHY_ASFWA Thymidylate kinase OS=African swine fever
           virus (isolate Warthog/Namibia/Wart80/1980) GN=TMK PE=3
           SV=1
          Length = 239

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
 Frame = +3

Query: 150 VLGMFGIGGAGKSTACMLITESMRKAFSGRVCHVEFKPDTSTLKLQCTVLRELIRDNEVF 329
           ++ + GI G GKST  M + +++       VC     PDT+T  L   VL ++I  +   
Sbjct: 5   LIAIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMSSEQ 64

Query: 330 LDRHMTNEHKVG*CEMSLFLVLN-------QEWASLVWAK 428
           L +  T        E++  L LN         W+ L +A+
Sbjct: 65  LHKLFTKHCSEFVAEIAALLKLNFIVIVDRYIWSGLAYAQ 104


>sp|P25941|AFSR_STRCO Regulatory protein afsR OS=Streptomyces
           coelicolor GN=afsR PE=3 SV=2
          Length = 993

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = +3

Query: 36  PSDVRSSVLHVQGRERICKELQAKFNAALPSQRIASTKVLG---MFGIGGAGKSTACMLI 206
           P+ + ++V    GR    +EL    +AA  S   AS +V+    + GIGG GK+T  + +
Sbjct: 286 PAQLPATVSDFTGRAAFVRELSDVLSAA--SGESASGRVMAVSALAGIGGVGKTTLAVHV 343

Query: 207 TESMRKAFSGRVCHVEFK 260
               R AF     +V+ +
Sbjct: 344 AHRARAAFPDGQLYVDLQ 361


>sp|Q9LVT4|DRL37_ARATH Probable disease resistance protein At5g47250
           OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1
          Length = 843

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +3

Query: 81  RICKE---LQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSGR--VC 245
           R+C++   L         S R    ++LG+FG+GG GK+T   LI     +       V 
Sbjct: 152 RLCQQTVGLDTTLEKTWESLRKDENRMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVI 211

Query: 246 HVEFKPDTSTLKLQCTVLREL-IRDN 320
            VE   D    K+Q  +   L I DN
Sbjct: 212 WVESSKDADVGKIQDAIGERLHICDN 237


>sp|P18770|CYAB_BORPE Cyclolysin secretion/processing ATP-binding
           protein cyaB OS=Bordetella pertussis GN=cyaB PE=3 SV=2
          Length = 712

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
 Frame = +3

Query: 126 SQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSGRVC---HVEFKPDTSTLKLQ--- 287
           S RIA  +V+G+ G  G+GKST   LI + M  A  GRV    H     D+++L+ Q   
Sbjct: 492 SLRIAPGEVVGVVGRSGSGKSTLTRLI-QRMFVADRGRVLIDGHDIGIVDSASLRRQLGV 550

Query: 288 ----CTVLRELIRDNEVFLDRHMTNEHKV 362
                T+    +RDN + L R   + H+V
Sbjct: 551 VLQESTLFNRSVRDN-IALTRPGASMHEV 578


>sp|P11641|Y32K_MCMV Uncharacterized 32.7 kDa protein OS=Maize
           chlorotic mottle virus PE=4 SV=2
          Length = 290

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 221 PHGFRNQHTC----CALACSSNTKHAKHFSACNSLGWQSSIELCLQ 96
           P+G+++ H C    C+  C+S  +H++     ++  W SS   C Q
Sbjct: 229 PNGWQHNHRCGIQLCSTLCASLGRHSQQTPLADTFPWHSSPITCYQ 274


>sp|Q8BUR4|DOCK1_MOUSE Dedicator of cytokinesis protein 1 OS=Mus
           musculus GN=Dock1 PE=1 SV=3
          Length = 1865

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3

Query: 203 QHTCCALACSSNTKHAKHFSACNSLGWQSSIELCLQLLANTFSALHMQDTGP 48
           QH C  +     T   K+      L  Q  +E C QLL+N    L+ +D GP
Sbjct: 852 QHDCREILLPMMTDQLKYH-----LERQEELEACCQLLSNILEVLYRKDVGP 898


>sp|Q9CP98|RBSA1_PASMU Ribose import ATP-binding protein rbsA 1
           OS=Pasteurella multocida GN=rbsA1 PE=3 SV=1
          Length = 498

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 54  SVLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLIT 209
           ++LH+QG ++    ++A  NA L    + + + + + G  GAGKST   ++T
Sbjct: 5   TLLHIQGIDKSFPGVKALSNACLS---VYAGRAMALMGENGAGKSTLMKVLT 53


>sp|P21441|MDR_LEITA Multidrug resistance protein OS=Leishmania
            tarentolae GN=PGPA PE=3 SV=2
          Length = 1548

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = +3

Query: 51   SSVLH-VQGRERICKELQAKFNAALP------SQRIASTKVLGMFGIGGAGKSTACMLIT 209
            SS LH VQ    + + +Q ++   LP      S +IA  + +G+ G  G+GKST  +L+T
Sbjct: 1275 SSALHPVQAGSLVLEGVQMRYREGLPLVLRGVSFQIAPREKVGIVGRTGSGKST--LLLT 1332

Query: 210  ESMRKAFSGRVCHV 251
                    G V HV
Sbjct: 1333 FMRMVEVCGGVIHV 1346


>sp|Q65WJ1|ARAG_MANSM Arabinose import ATP-binding protein araG
           OS=Mannheimia succiniciproducens (strain MBEL55E)
           GN=araG PE=3 SV=1
          Length = 502

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 42  DVRSSVLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLI 206
           DVR  + H+ G     ++LQ  F     S  + + +VLG+FG+ GAG+S    +I
Sbjct: 256 DVRLKIAHLSG-----EKLQGDF-----SLTVRAGEVLGLFGLVGAGRSELLKVI 300
tr_hit_id A9TDN3
Definition tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 100
Score (bit) 63.5
E-value 7.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917267|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_E07.
         (550 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella paten...    64   7e-09
tr|A9RG57|A9RG57_PHYPA Predicted protein OS=Physcomitrella paten...    51   3e-05
tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|B3V825|B3V825_TOBAC NBS-coding resistance gene analog (Fragme...    41   0.036
tr|B8JAW6|B8JAW6_9DELT Curli production assembly/transport compo...    38   0.40 
tr|A7PQ77|A7PQ77_VITVI Chromosome chr18 scaffold_24, whole genom...    38   0.40 
tr|A5BKE7|A5BKE7_VITVI Putative uncharacterized protein OS=Vitis...    38   0.40 
tr|Q2IMY7|Q2IMY7_ANADE Curli production assembly/transport compo...    37   0.52 
tr|Q0SII3|Q0SII3_RHOSR ABC ribose transporter, ATP-binding compo...    37   0.52 
tr|B4UB13|B4UB13_ANASK Curli production assembly/transport compo...    37   0.52 
tr|Q5DMW2|Q5DMW2_CUCME MRGH9 OS=Cucumis melo GN=MRGH9 PE=4 SV=1        37   0.52 
tr|Q2QZS8|Q2QZS8_ORYSJ NB-ARC domain containing protein OS=Oryza...    37   0.52 
tr|A7QN76|A7QN76_VITVI Chromosome undetermined scaffold_131, who...    37   0.52 
tr|A7PQA5|A7PQA5_VITVI Chromosome chr18 scaffold_24, whole genom...    37   0.68 
tr|A1W696|A1W696_ACISJ Helicase domain protein OS=Acidovorax sp....    37   0.89 
tr|A7PQA2|A7PQA2_VITVI Chromosome chr18 scaffold_24, whole genom...    37   0.89 
tr|Q6K4U3|Q6K4U3_ORYSJ Os02g0301800 protein OS=Oryza sativa subs...    36   1.2  
tr|B8AFX7|B8AFX7_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.2  
tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.2  
tr|A9RWI1|A9RWI1_PHYPA Predicted protein (Fragment) OS=Physcomit...    36   1.5  
tr|Q8LKP5|Q8LKP5_AEGTA Putative NBS-LRR resistance protein OS=Ae...    35   2.0  
tr|A9CR80|A9CR80_TOBAC N-like protein OS=Nicotiana tabacum GN=NL...    35   2.0  
tr|Q4FAB7|Q4FAB7_TOXGO ATP-binding cassette sub-family E member ...    35   2.0  
tr|A5N7P8|A5N7P8_CLOK5 Predicted ABC transporter, ATPase compone...    35   2.6  
tr|Q9ZS32|Q9ZS32_SOLTU NL25 OS=Solanum tuberosum GN=nl25 PE=2 SV=1     35   2.6  
tr|A9THG7|A9THG7_PHYPA Predicted protein (Fragment) OS=Physcomit...    35   2.6  
tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.6  
tr|A7QPI8|A7QPI8_VITVI Chromosome chr18 scaffold_137, whole geno...    35   2.6  
tr|A7Q7V0|A7Q7V0_VITVI Chromosome chr18 scaffold_61, whole genom...    35   2.6  
tr|A9JLM6|A9JLM6_ASFPP Thymidylate kinase OS=African swine fever...    35   3.4  

>tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169462 PE=4 SV=1
          Length = 1173

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 35/100 (35%), Positives = 54/100 (54%)
 Frame = +3

Query: 9   ILKSVMETMPSDVRSSVLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKS 188
           ++  + + +P DV      VQGR RIC+ +  KF     S R    +V+G++G GG GK+
Sbjct: 254 VVSYLCDLVPPDVWWDDSDVQGRLRICRRILGKFEKTCESLR-NGVRVVGLYGTGGIGKT 312

Query: 189 TACMLITESMRKAFSGRVCHVEFKPDTSTLKLQCTVLREL 308
           T C ++   + K F G+VCH E      TL+L   V++ L
Sbjct: 313 TFCKVLCNELDKKFHGKVCHAEL--GNPTLELLKVVIKTL 350


>tr|A9RG57|A9RG57_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65683 PE=4 SV=1
          Length = 983

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 34/102 (33%), Positives = 47/102 (46%)
 Frame = +3

Query: 9   ILKSVMETMPSDVRSSVLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKS 188
           I+K +    P  V   +   +G ERICK L   F A          + LG++G+GG GK+
Sbjct: 212 IVKKIWYLCPPHVPYDLDEKEGWERICKVLSGLFVAD------EGVEKLGIYGMGGLGKT 265

Query: 189 TACMLITESMRKAFSGRVCHVEFKPDTSTLKLQCTVLRELIR 314
           T C  +       F GRV H+E       L LQ  +L+ L R
Sbjct: 266 TICKGMCNYFHGHFFGRVFHLELVSGRKQLDLQKQMLKTLFR 307


>tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169270 PE=4 SV=1
          Length = 1083

 Score = 47.0 bits (110), Expect = 7e-04
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +3

Query: 75  RERICKE---LQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSGRVC 245
           R R C+    + AK     PS+R    +V+G++G GG GK+T C  + + +   F G+VC
Sbjct: 254 RWRSCQNSMRILAKVEKTCPSRRDGG-RVVGLYGAGGIGKTTFCKELLDELETKFHGKVC 312

Query: 246 HVEFKPDTSTLKLQCTV 296
           H+E    T    LQ  +
Sbjct: 313 HMEIGSHTHEKFLQLLI 329


>tr|B3V825|B3V825_TOBAC NBS-coding resistance gene analog (Fragment)
           OS=Nicotiana tabacum GN=NBS141-r PE=4 SV=1
          Length = 269

 Score = 41.2 bits (95), Expect = 0.036
 Identities = 27/102 (26%), Positives = 51/102 (50%)
 Frame = +3

Query: 51  SSVLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLITESMRKAF 230
           SS+  + G +   ++L++     + + RI    +LG++G+GG GK+T    I +++   F
Sbjct: 12  SSLRDIVGIDTHLEKLKSLLKVGINNVRI----ILGIWGMGGVGKTTIARAIFDNLSHQF 67

Query: 231 SGRVCHVEFKPDTSTLKLQCTVLRELIRDNEVFLDRHMTNEH 356
                  + K +     LQ T+L EL+R      D ++ N+H
Sbjct: 68  EASCFLADIKENEKLHSLQNTLLSELLRRK----DDYVNNKH 105


>tr|B8JAW6|B8JAW6_9DELT Curli production assembly/transport
           component CsgG OS=Anaeromyxobacter dehalogenans 2CP-1
           GN=A2cp1_0420 PE=3 SV=1
          Length = 321

 Score = 37.7 bits (86), Expect = 0.40
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +3

Query: 57  VLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSG 236
           VL V       K  Q  F  ALP +R+ + KVL +FG G   +   C + + ++ KA   
Sbjct: 253 VLAVMEAGNTVKSRQTGFEVALPPKRVGTIKVLSLFGDGETSEGAVCEVTSGTIEKAVLP 312

Query: 237 RVCHVEFKP 263
           ++   E  P
Sbjct: 313 KLFVAEATP 321


>tr|A7PQ77|A7PQ77_VITVI Chromosome chr18 scaffold_24, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021951001
           PE=4 SV=1
          Length = 879

 Score = 37.7 bits (86), Expect = 0.40
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = +3

Query: 3   ERILKSVMETMPSDVRSSVLHVQ----GRERICKELQAKFNAALPSQRIASTKVLGMFGI 170
           E+   +V++ +  D+   + H Q    G+  +      +   +L  ++     V+G+ GI
Sbjct: 165 EQYETNVLKEITDDIIRRLNHDQPLNVGKNIVGMSFHLEKLKSLMKKKFNEVCVVGICGI 224

Query: 171 GGAGKSTACMLITESMRKAFSGR--VCHVEFKPDTSTLKLQCTVLRELIRDNEVFL 332
           GG GK+T  M I   +   + G   +  V+ + +  TL+LQ  +L++++R   + L
Sbjct: 225 GGIGKTTVAMAIYNELSNQYDGSSFLRKVKERSERDTLQLQHELLQDILRGKSLKL 280


>tr|A5BKE7|A5BKE7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_003124 PE=4 SV=1
          Length = 1039

 Score = 37.7 bits (86), Expect = 0.40
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = +3

Query: 3   ERILKSVMETMPSDVRSSVLHVQ----GRERICKELQAKFNAALPSQRIASTKVLGMFGI 170
           E+   +V++ +  D+   + H Q    G+  +      +   +L  ++     V+G+ GI
Sbjct: 165 EQYETNVLKEITGDIIRRLNHDQPLNVGKNIVGMSFHLEKLKSLMKKKFNEVCVVGICGI 224

Query: 171 GGAGKSTACMLITESMRKAFSGR--VCHVEFKPDTSTLKLQCTVLRELIRDNEVFL 332
           GG GK+T  M I   +   + G   +  V+ + +  TL+LQ  +L++++R   + L
Sbjct: 225 GGIGKTTVAMAIYNELSNQYDGSSFLRKVKERSERDTLQLQHELLQDILRGKSLKL 280


>tr|Q2IMY7|Q2IMY7_ANADE Curli production assembly/transport
           component CsgG OS=Anaeromyxobacter dehalogenans (strain
           2CP-C) GN=Adeh_0391 PE=3 SV=1
          Length = 320

 Score = 37.4 bits (85), Expect = 0.52
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +3

Query: 90  KELQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSGRVCHVEFKP 263
           K  Q  F  ALP +R+ + KVL +FG G   +   C L + ++ KA   ++   E  P
Sbjct: 263 KSRQTGFEVALPPKRVGTLKVLSLFGDGETSEGAVCELTSGTIEKASLPKLFVAEATP 320


>tr|Q0SII3|Q0SII3_RHOSR ABC ribose transporter, ATP-binding
           component OS=Rhodococcus sp. (strain RHA1)
           GN=RHA1_ro00820 PE=3 SV=1
          Length = 511

 Score = 37.4 bits (85), Expect = 0.52
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 SQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSGRVC----HVEFKPDTSTLKLQCT 293
           S  + + +V+G+ GI GAG+S  C L+     KA +GRV     HV+     ST      
Sbjct: 278 SLEVRAGEVVGLAGIVGAGRSELCRLVA-GFDKAAAGRVVVDERHVDLGTPRSTAAAGIV 336

Query: 294 VLRELIRDNEVFLDRHMTNEHKVG 365
           +L E  ++  +FLD  + +   +G
Sbjct: 337 MLPESRKEQGLFLDMSIADNVCLG 360


>tr|B4UB13|B4UB13_ANASK Curli production assembly/transport
           component CsgG OS=Anaeromyxobacter sp. (strain K)
           GN=AnaeK_0419 PE=3 SV=1
          Length = 321

 Score = 37.4 bits (85), Expect = 0.52
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +3

Query: 57  VLHVQGRERICKELQAKFNAALPSQRIASTKVLGMFGIGGAGKSTACMLITESMRKAFSG 236
           VL V       K  Q  F  ALP +R+ + KVL +FG G   +   C + + ++ KA   
Sbjct: 253 VLAVMEAGNTVKSRQTGFEVALPPKRVGTIKVLSLFGDGETSEGAVCEVTSGAIEKAALP 312

Query: 237 RVCHVEFKP 263
           ++   E  P
Sbjct: 313 KLFVAEATP 321