BP917274
Clone id YMU001_000098_F05
Library
Length 170
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGCAGAACAATATAGGCATTGATATTTCGTATTCTATCCTTTAAGAATTCATGCAAACA
CTTTGAGCATCTAGGAGCACATTCTCTTTCCTTTCCTGGAGGTCAAGATCAGGAAAGGCA
ACCACCATGAAGCCTTTGGGGTTGACATTTCTCACCGATTATGGGAGTCT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917274|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_F05.
(170 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q1GPT0
Definition tr|Q1GPT0|Q1GPT0_SPHAL Helicase-like protein OS=Sphingopyxis alaskensis
Align length 33
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917274|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_F05.
(170 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1GPT0|Q1GPT0_SPHAL Helicase-like protein OS=Sphingopyxis ala... 35 1.9

>tr|Q1GPT0|Q1GPT0_SPHAL Helicase-like protein OS=Sphingopyxis
alaskensis GN=Sala_2637 PE=4 SV=1
Length = 1528

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1

Query: 67 ASRSTFSFLSWRSRSGKATTMKPLGLTFLTDYG 165
A RS SFL + R+G+ M+P+ LT L+DYG
Sbjct: 604 APRSMASFLQRKGRAGRDRAMRPITLTVLSDYG 636