BP917278
Clone id YMU001_000098_F09
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATTATTAGTTCCTGTCTTCCTTGGTATGGGTGCCTGCATTGCATTTCAGAAACCAACCC
TGGTTGCTAACCATATTCAATTTTTTTACTCTTACCTATTATCAAAGGCACACAAAGAAA
ACACAGAATGGTAACGGTCTGTGATGAAAGGATGACATCCACAATGAAGTGGAGCATATC
GTTTGCACCATGCTTCAAGAAGTCTGTTTCCTTTTGAATCTAAATGAGTGGCATTTTGTG
TAGCCTCTTTGCATTTGCCTTCTTGCCATTCTTACCCCCACTTTGCATTTCCGACAGAAT
TCTCAAAACAAGTAGGTTCTACATCCTGCACAATCCTCGCCATCTACACAACAGCCCTTT
CTTGCTGCCTCTTTGTGGAGCATGAGCAATTTAGCAACGTAGCATCTAAGACAAACTCAC
ATTCCTACCAGATGGCAGCAGGTAGCCGACTAGTTCAACTAGACACACTCCTCTCAGCTG
TGATATCAAGTGAGGGTACGTGCT
■■Homology search results ■■ -
sp_hit_id Q3LHL9
Definition sp|Q3LHL9|WGE_DROME Protein winged eye OS=Drosophila melanogaster
Align length 96
Score (bit) 30.4
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917278|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_F09.
(504 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3LHL9|WGE_DROME Protein winged eye OS=Drosophila melanogaste... 30 4.9
sp|Q51649|T408_BURM1 Putative transposase for insertion sequence... 30 6.4
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-assoc... 30 8.3

>sp|Q3LHL9|WGE_DROME Protein winged eye OS=Drosophila melanogaster
GN=wge PE=1 SV=1
Length = 1658

Score = 30.4 bits (67), Expect = 4.9
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Frame = +3

Query: 231 AFCVASLH-LPSCHSYPHFAFPTEFSKQVGSTSCT-------ILAIYTTALSCCLFVEHE 386
A ASL P+ S P+F FP+ Q ST+ + LA TA +H
Sbjct: 314 AAAAASLQPTPNLSSLPNFIFPSMGGHQALSTTPSYASTLQLYLAAAATATGSSTMCQHS 373

Query: 387 QFSNVASKTNSH-SYQMAAGSRLVQLDTLLSAVISS 491
+ TNS + +AAGS + Q S++ SS
Sbjct: 374 NQQTSTTTTNSTINLSLAAGSGVTQSGNAASSLSSS 409


>sp|Q51649|T408_BURM1 Putative transposase for insertion sequence
IS408 OS=Burkholderia multivorans (strain ATCC 17616 /
249) GN=Bmul_4730 PE=3 SV=1
Length = 518

Score = 30.0 bits (66), Expect = 6.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -2

Query: 380 LHKEAARKGCCVD------GEDCAGCRTYLF*EFCRKCKVGVRMARRQMQR 246
LH+E RKG + E G RTY + +FC+K K + +R M++
Sbjct: 90 LHRELRRKGVTLQLLWEEYAEANPGQRTYRYTQFCQKYKDWAKSIKRSMRQ 140


>sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan
synthesis-associated protein C17G6.11c
OS=Schizosaccharomyces pombe GN=SPAC17G6.11c PE=2 SV=1
Length = 636

Score = 29.6 bits (65), Expect = 8.3
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +3

Query: 267 HSYPHFAFPTEFSKQVGSTSCTILAIYTTALSCCLFVEHEQFSNVASKTNSHSYQMAAGS 446
+ YP++ F T +++ V + + +Y ALSC + + S A + Y+ +G
Sbjct: 452 YMYPNYDFVTIYNQSVSAMNGWAGGVYQQALSCASQLNNSWLSGNAYQKYGFDYKPGSGP 511

Query: 447 RLVQLDTLLSAVISSEGT 500
D L+S + E T
Sbjct: 512 -----DALISWFVGDEYT 524


tr_hit_id A4CVH7
Definition tr|A4CVH7|A4CVH7_SYNPV ABC transporter, multidrug efflux family protein OS=Synechococcus sp. (strain WH7805)
Align length 49
Score (bit) 33.5
E-value 6.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917278|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_F09.
(504 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4CVH7|A4CVH7_SYNPV ABC transporter, multidrug efflux family ... 33 6.0

>tr|A4CVH7|A4CVH7_SYNPV ABC transporter, multidrug efflux family
protein OS=Synechococcus sp. (strain WH7805)
GN=WH7805_04381 PE=3 SV=1
Length = 602

Score = 33.5 bits (75), Expect = 6.0
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Frame = -1

Query: 201 FLKHGANDMLHFIVDVILSSQTVTILC-------FLCVPLIIGKSKKIE 76
FL HGAN++LH I V+L +T++ FL +P+I+ S + +
Sbjct: 150 FLDHGANEILHLITTVLLVGGAMTVVAPGVALFSFLPIPVILWGSLRFQ 198