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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917286
Clone id YMU001_000098_G05
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATCGGGAGGAGAAAGAGGCGCCTCCTCCTTGGGTTGATGCGTGCTAGCAGCGCCATTCT
CATGCGGAGAAGCATCGTGTGACGCCATGGCGCTAAGGTAAAGAGAGTGTGCCGGAGTAT
GTAGGAGGAGGTCGCTTGGGAAAAGCGCCCAAGGTGTAAAATAAGACTAGTAGTAGTAGT
AGACAACAGGGGATAGAAAGAGCGTAAGAGATAAATTATGCACGCATGAGATAGAGCTTT
TAGTGACGTGGACGTCGCACTCTTCTCGTTGGCGTGTTTTATATAGAAGGATCAGGGGGG
TGAAAAGAAGAGTTAACCGCCCTAGGAGTTTGGAGTCGCCCATGTGGCCGCCTCTTTTGC
ATGTTCGCCATGCTGGCGTGCGGCCTGCGCAGCGCTGTGTGCCACTGGCTGCAACAGACC
AATTCCGTGCTGCTCCACAACACATTGAGCAGCTGTACCCCGCTGCTCTGGCCTTGCTTA
CATAATTCAACCCGCTGCAGACAAGCAGCGAGCAATACAAGGAAGACAGGAACTAATAAT
GCG
■■Homology search results ■■ -
sp_hit_id P02441
Definition sp|P02441|KRA3_SHEEP Keratin, high-sulfur matrix protein, IIIA3 OS=Ovis aries
Align length 49
Score (bit) 35.8
E-value 0.14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917286|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_G05.
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P02441|KRA3_SHEEP Keratin, high-sulfur matrix protein, IIIA3 ...    36   0.14 
sp|P02442|KRA3_CAPHI Keratin, high-sulfur matrix protein, IIIA3 ...    36   0.14 
sp|P02443|KRA3A_SHEEP Keratin, high-sulfur matrix protein, IIIA3...    36   0.14 
sp|Q9BYT5|KRA22_HUMAN Keratin-associated protein 2-2 OS=Homo sap...    35   0.31 
sp|A8MTN3|KRA2X_HUMAN Putative keratin-associated protein ENSP00...    34   0.40 
sp|Q9BYR9|KRA24_HUMAN Keratin-associated protein 2-4 OS=Homo sap...    34   0.40 
sp|P0C7H8|KRA23_HUMAN Keratin-associated protein 2-3 OS=Homo sap...    34   0.40 
sp|Q9BYU5|KRA21_HUMAN Keratin-associated protein 2-1 OS=Homo sap...    34   0.40 
sp|A6S7C7|ATG2_BOTFB Autophagy-related protein 2 OS=Botryotinia ...    32   2.0  
sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sa...    30   7.6  
sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sa...    30   7.6  
sp|A7E6F5|ATG2_SCLS1 Autophagy-related protein 2 OS=Sclerotinia ...    30   7.6  
sp|Q8R151|ZNFX1_MOUSE NFX1-type zinc finger-containing protein 1...    30   9.9  
sp|Q9P2E3|ZNFX1_HUMAN NFX1-type zinc finger-containing protein 1...    30   9.9  
sp|P06486|US10_HHV11 Virion protein US10 OS=Human herpesvirus 1 ...    30   9.9  
sp|Q5TM19|IKBL1_MACMU NF-kappa-B inhibitor-like protein 1 OS=Mac...    30   9.9  
sp|Q9UBC1|IKBL1_HUMAN NF-kappa-B inhibitor-like protein 1 OS=Hom...    30   9.9  

>sp|P02441|KRA3_SHEEP Keratin, high-sulfur matrix protein, IIIA3
           OS=Ovis aries PE=1 SV=1
          Length = 131

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC T+  A V R C       QP +
Sbjct: 53  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQPVS 101


>sp|P02442|KRA3_CAPHI Keratin, high-sulfur matrix protein, IIIA3
           OS=Capra hircus PE=1 SV=1
          Length = 132

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC T+  A V R C       QP +
Sbjct: 54  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQPVS 102


>sp|P02443|KRA3A_SHEEP Keratin, high-sulfur matrix protein, IIIA3A
           OS=Ovis aries PE=1 SV=1
          Length = 130

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC T+  A V R C       QP +
Sbjct: 54  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQPVS 102


>sp|Q9BYT5|KRA22_HUMAN Keratin-associated protein 2-2 OS=Homo
           sapiens GN=KRTAP2-2 PE=2 SV=2
          Length = 128

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC ++  A V R C       QP +
Sbjct: 55  CEPCCRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVS 103


>sp|A8MTN3|KRA2X_HUMAN Putative keratin-associated protein
           ENSP00000381495 OS=Homo sapiens PE=3 SV=1
          Length = 129

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC ++  A V R C       QP +
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVS 103


>sp|Q9BYR9|KRA24_HUMAN Keratin-associated protein 2-4 OS=Homo
           sapiens GN=KRTAP2-4 PE=2 SV=1
          Length = 128

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC ++  A V R C       QP +
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVS 103


>sp|P0C7H8|KRA23_HUMAN Keratin-associated protein 2-3 OS=Homo
           sapiens GN=KRTAP2-3 PE=2 SV=1
          Length = 128

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC ++  A V R C       QP +
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVS 103


>sp|Q9BYU5|KRA21_HUMAN Keratin-associated protein 2-1 OS=Homo
           sapiens GN=KRTAP2-1 PE=2 SV=2
          Length = 128

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC ++  A V R C       QP +
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVS 103


>sp|A6S7C7|ATG2_BOTFB Autophagy-related protein 2 OS=Botryotinia
           fuckeliana (strain B05.10) GN=atg2 PE=3 SV=1
          Length = 2160

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -3

Query: 145 LFPSDLLLHTPAHSLYLSAMASHDASPHENGAASTHQPKEEA---PLSPPD 2
           L  S L  H  A S+Y+SA++   A+P   G A +    E+A   PL+P D
Sbjct: 556 LAQSQLFSHEEAESMYMSAVSFTSAAPIPGGWADSGTESEDARSPPLTPTD 606


>sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo
           sapiens GN=KRTAP10-8 PE=2 SV=2
          Length = 259

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 365 SPCWRAACAALCA-TGCNRPIPCCSTTH*AAVPRC 466
           SPC +A C  +C  + C +P+ C S    A+ P C
Sbjct: 112 SPCQQACCVPVCCKSNCCKPVCCVSICSGASSPCC 146
tr_hit_id Q2IHW9
Definition tr|Q2IHW9|Q2IHW9_ANADE Sensor protein OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
Align length 55
Score (bit) 42.0
E-value 0.021
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917286|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_G05.
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2IHW9|Q2IHW9_ANADE Sensor protein OS=Anaeromyxobacter dehalo...    42   0.021
tr|Q9TSF0|Q9TSF0_SHEEP BIIIA3 (Fragment) OS=Ovis aries GN=KRTAP2...    36   1.5  
tr|Q9D3H4|Q9D3H4_MOUSE Keratin associated protein 2-4 OS=Mus mus...    35   2.0  
tr|A0PK51|A0PK51_MOUSE Novel member of the keratin associated pr...    35   2.0  
tr|Q0VC31|Q0VC31_BOVIN Keratin associated protein-like OS=Bos ta...    35   2.0  
tr|A5PJJ4|A5PJJ4_BOVIN LOC787225 protein OS=Bos taurus GN=LOC787...    35   2.0  
tr|A5PJJ0|A5PJJ0_BOVIN LOC618938 protein OS=Bos taurus GN=LOC618...    35   2.0  
tr|A8MXM4|A8MXM4_HUMAN Putative uncharacterized protein ENSP0000...    34   4.4  
tr|B1SYL4|B1SYL4_9BURK Putative uncharacterized protein OS=Burkh...    34   5.7  
tr|A0KLV4|A0KLV4_AERHH Putative membrane protein OS=Aeromonas hy...    33   7.6  
tr|Q08EG8|Q08EG8_MOUSE LOC675238 protein OS=Mus musculus GN=Krta...    33   9.7  
tr|B0XKQ6|B0XKQ6_CULQU Putative uncharacterized protein OS=Culex...    33   9.7  
tr|B0XBD7|B0XBD7_CULQU Putative uncharacterized protein OS=Culex...    33   9.7  
tr|A4SLD7|A4SLD7_AERS4 Putative uncharacterized protein OS=Aerom...    33   9.9  

>tr|Q2IHW9|Q2IHW9_ANADE Sensor protein OS=Anaeromyxobacter
           dehalogenans (strain 2CP-C) GN=Adeh_1473 PE=4 SV=1
          Length = 1084

 Score = 42.0 bits (97), Expect = 0.021
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
 Frame = -3

Query: 478 SKARAAGYSCSMCCGAARN-----WSVAASG---TQRCAGRTPAWRTCKRGGHMG 338
           S++R A    S C GA R      WS  + G   T R AGR P WRTC+ G   G
Sbjct: 50  SRSRTASTGRSSCSGAGRTASASRWSSGSRGWSTTSRTAGRRPRWRTCRSGARRG 104


>tr|Q9TSF0|Q9TSF0_SHEEP BIIIA3 (Fragment) OS=Ovis aries GN=KRTAP2.3
           PE=4 SV=1
          Length = 67

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC T+  A V R C       QP +
Sbjct: 12  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQPVS 60


>tr|Q9D3H4|Q9D3H4_MOUSE Keratin associated protein 2-4 OS=Mus
           musculus GN=Krtap2-4 PE=2 SV=1
          Length = 131

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQP 493
           C PC R  C   C+   GC RPI CC T+  A V R C   +   QP
Sbjct: 54  CEPCRRPICCDPCSLQQGCCRPITCCPTSCTAVVCRPCCWASTCCQP 100


>tr|A0PK51|A0PK51_MOUSE Novel member of the keratin associated
           protein 2 (Krtap2) family OS=Mus musculus
           GN=OTTMUSG00000002199 PE=2 SV=1
          Length = 136

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQP 493
           C PC R  C   C+   GC RPI CC T+  A V R C   +   QP
Sbjct: 59  CEPCRRPICCDPCSLQQGCCRPITCCPTSCTAVVCRPCCWASTCCQP 105


>tr|Q0VC31|Q0VC31_BOVIN Keratin associated protein-like OS=Bos
           taurus GN=LOC777598 PE=2 SV=1
          Length = 132

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQP 493
           C PC R  C   C+   GC RPI CC T+  A V R C       QP
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQP 101


>tr|A5PJJ4|A5PJJ4_BOVIN LOC787225 protein OS=Bos taurus GN=LOC787225
           PE=2 SV=1
          Length = 126

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQP 493
           C PC R  C   C+   GC RPI CC T+  A V R C       QP
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQP 101


>tr|A5PJJ0|A5PJJ0_BOVIN LOC618938 protein OS=Bos taurus GN=LOC618938
           PE=2 SV=1
          Length = 132

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQP 493
           C PC R  C   C+   GC RPI CC T+  A V R C       QP
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPTSCQAVVCRPCCWATTCCQP 101


>tr|A8MXM4|A8MXM4_HUMAN Putative uncharacterized protein
           ENSP00000381494 OS=Homo sapiens PE=4 SV=1
          Length = 123

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 362 CSPCWRAACAALCAT--GCNRPIPCCSTTH*AAVPR-CSGLAYIIQPAA 499
           C PC R  C   C+   GC RPI CC ++  A V R C       QP +
Sbjct: 55  CEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVS 103


>tr|B1SYL4|B1SYL4_9BURK Putative uncharacterized protein
           OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_0630
           PE=4 SV=1
          Length = 195

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
 Frame = +2

Query: 347 AASFACSPCWRAACAA-----LCAT--GCNRPIPCCSTTH*AAVPRCSGLAYIIQPAADK 505
           AA+   +P   AACAA     LC T  GC    PCC+T   AAVP  +  A      AD 
Sbjct: 21  AAAATLAPLTGAACAADAAGALCTTDPGCGADAPCCAT---AAVPDAATAADAAADTADA 77

Query: 506 QRAI 517
             A+
Sbjct: 78  PDAL 81


>tr|A0KLV4|A0KLV4_AERHH Putative membrane protein OS=Aeromonas
           hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
           9240) GN=AHA_2747 PE=4 SV=1
          Length = 369

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 313 LTALGVWSRPCGRLFCMFAMLACGLRSAVCHWLQQ 417
           LTALG W  P    F +  ++A GL  A   WLQQ
Sbjct: 329 LTALGKWMEPDVDGFLLLCLIAIGLSVAASRWLQQ 363