BP917288
Clone id YMU001_000098_G09
Library
Length 413
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000098_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCGCCTCTATCCACCTTGGCACTTACTATAATCATCTATTCCAATCACGAGGCAAGAAA
TAGATAACAAAAGGGGGGGAGAAGAAGGGAAGATAGGCAAGGGTGTCAGATTATTGATTT
TGCACTCTATCCCTCACCAAGGCATTAGTCCTACCCTTCCCACAGTAAACCCACAAAAAT
ATGATAAATACTAAAGGAAAATGAAAAATTACATAAGGTGCTAAACAAAGAAGAACTATC
TTCCAAGTAAGGTATAAGGTACAGACACTTTACAACAAATTTAATCGGTTATCATTTACC
TACTAAAAAAAGCCCAAATTCACCTATAGAAAAACTCACACATTTAGGTACCAATATTAT
AAGTGCAGACATACTCATACTCACATGAGCATATAGCAATACAAGGATGAGTG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917288|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_G09.
(413 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q46L92
Definition tr|Q46L92|Q46L92_PROMT Uncharacterized conserved membrane protein OS=Prochlorococcus marinus (strain NATL2A)
Align length 65
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917288|Adiantum capillus-veneris mRNA, clone:
YMU001_000098_G09.
(413 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q46L92|Q46L92_PROMT Uncharacterized conserved membrane protei... 34 3.2
tr|A2C1W0|A2C1W0_PROM1 Putative uncharacterized protein OS=Proch... 34 3.2
tr|B6AFC0|B6AFC0_9CRYT EF hand family protein OS=Cryptosporidium... 34 3.2
tr|Q7N9C9|Q7N9C9_PHOLL Unknown protein OS=Photorhabdus luminesce... 33 7.1

>tr|Q46L92|Q46L92_PROMT Uncharacterized conserved membrane protein
OS=Prochlorococcus marinus (strain NATL2A) GN=PMN2A_0244
PE=4 SV=1
Length = 257

Score = 34.3 bits (77), Expect = 3.2
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -3

Query: 327 IGEFGLFLVGK**PIKFVVKCLYLIPYLEDSSSLFST-----LCNFSFSFSIYH--IFVG 169
IG FGLF++G +L YL + LF T L + SFS ++ + IFVG
Sbjct: 141 IGSFGLFIIG------------FLNGYLSSGTGLFVTIWMIILFDLSFSVAVAYTLIFVG 188

Query: 168 LLWEG 154
+ W G
Sbjct: 189 IFWNG 193


>tr|A2C1W0|A2C1W0_PROM1 Putative uncharacterized protein
OS=Prochlorococcus marinus (strain NATL1A)
GN=NATL1_09121 PE=4 SV=1
Length = 257

Score = 34.3 bits (77), Expect = 3.2
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -3

Query: 327 IGEFGLFLVGK**PIKFVVKCLYLIPYLEDSSSLFST-----LCNFSFSFSIYH--IFVG 169
IG FGLF++G +L YL + LF T L + SFS ++ + IFVG
Sbjct: 141 IGSFGLFIIG------------FLNGYLSSGTGLFVTIWMIILFDLSFSVAVAYTLIFVG 188

Query: 168 LLWEG 154
+ W G
Sbjct: 189 IFWNG 193


>tr|B6AFC0|B6AFC0_9CRYT EF hand family protein OS=Cryptosporidium
muris RN66 GN=CMU_032960 PE=4 SV=1
Length = 5222

Score = 34.3 bits (77), Expect = 3.2
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Frame = +2

Query: 173 TKI**ILKENEKLHK-VLNKEELSSK*GIRYRHFTTNLIG-----YHLPT----KKSPNS 322
+KI IL N+ L K VLNK+E+ + I Y +N+ YHL + K P
Sbjct: 4006 SKICGILDRNQCLFKEVLNKKEVVNNGNIGYEKLKSNISNKLDQIYHLKSNITLKDKPGE 4065

Query: 323 PIEKLTHLGTNIISADILI 379
I+ + HL + I D+LI
Sbjct: 4066 LIDMMEHLSSEFIIPDLLI 4084


>tr|Q7N9C9|Q7N9C9_PHOLL Unknown protein OS=Photorhabdus luminescens
subsp. laumondii GN=plu0412 PE=4 SV=1
Length = 188

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1

Query: 290 NRLNLL*SVCTLYLTWKIVLLCLAPYVIFHFPLVFIIFLWVYCGKGRT 147
N L +L +C + WKI C+ PY + + L+ FL C + T
Sbjct: 11 NNLFVLKHICVMLQVWKITRRCIVPYGCYFYLLLAAAFLLTGCAQELT 58