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Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917294|Adiantum capillus-veneris mRNA, clone: YMU001_000098_H04. (537 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6UUM4|Q6UUM4_ORYSJ Putative uncharacterized protein (Putativ... 39 2e-04 tr|Q33A45|Q33A45_ORYSJ Retrotransposon protein, putative, unclas... 37 3e-04 tr|Q8S5E4|Q8S5E4_ORYSA Putative uncharacterized protein OSJNBb00... 37 3e-04 tr|Q7XNI8|Q7XNI8_ORYSJ OSJNBb0032D24.5 protein OS=Oryza sativa s... 36 4e-04 tr|Q53KC9|Q53KC9_ORYSJ Retrotransposon protein, putative, unclas... 35 8e-04 tr|Q53KG9|Q53KG9_ORYSJ Retrotransposon protein, putative, unclas... 37 0.001 tr|Q0KIL1|Q0KIL1_SOLDE Gag/pol polyprotein, 3'-partial, putative... 37 0.001 tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 prot... 36 0.001 tr|Q7G4P3|Q7G4P3_ORYSJ Retrotransposon protein, putative, unclas... 35 0.002 tr|Q8S6X2|Q8S6X2_ORYSA Putative pol polyprotein OS=Oryza sativa ... 36 0.002 tr|Q2QZM9|Q2QZM9_ORYSJ Retrotransposon protein, putative, unclas... 35 0.002 tr|Q33A67|Q33A67_ORYSJ Retrotransposon protein, putative, unclas... 36 0.002 tr|Q7XSP1|Q7XSP1_ORYSJ OSJNBa0070M12.15 protein OS=Oryza sativa ... 35 0.002 tr|Q7XN29|Q7XN29_ORYSJ OSJNBa0083I11.15 protein (OSJNBa0021F22.2... 35 0.002 tr|Q339U0|Q339U0_ORYSJ Retrotransposon protein, putative, unclas... 35 0.002 tr|Q7XNM6|Q7XNM6_ORYSA OSJNBb0068N06.4 protein OS=Oryza sativa G... 37 0.002 tr|Q2QSH4|Q2QSH4_ORYSJ Retrotransposon protein, putative, unclas... 36 0.002 tr|Q2QVZ3|Q2QVZ3_ORYSJ Retrotransposon protein, putative, unclas... 35 0.002 tr|Q2QWF9|Q2QWF9_ORYSJ Retrotransposon protein, putative, unclas... 34 0.003 tr|Q6ASW9|Q6ASW9_ORYSJ Reverse transcriptase (RNA-dependent DNA ... 35 0.003 tr|Q2QQK7|Q2QQK7_ORYSJ Retrotransposon protein, putative, unclas... 35 0.003 tr|Q7XLE6|Q7XLE6_ORYSJ OSJNBa0013A04.23 protein (OSJNBb0069N01.4... 35 0.003 tr|Q01M82|Q01M82_ORYSA H0622G10.2 protein OS=Oryza sativa GN=H06... 35 0.003 tr|Q2QR22|Q2QR22_ORYSJ Retrotransposon protein, putative, unclas... 35 0.004 tr|Q2R2X8|Q2R2X8_ORYSJ Retrotransposon protein, putative, unclas... 35 0.004 tr|Q10I05|Q10I05_ORYSJ Retrotransposon protein, putative, unclas... 35 0.004 tr|Q94LN5|Q94LN5_ORYSJ Putative retroelement pol polyprotein (Re... 35 0.004 tr|Q6AVD1|Q6AVD1_ORYSJ Putative polyprotein OS=Oryza sativa subs... 35 0.004 tr|Q8H8Q2|Q8H8Q2_ORYSJ Putative gag-pol polyprotein (Retrotransp... 35 0.004 tr|Q75HC5|Q75HC5_ORYSJ Putative reverse transcriptase (Retrotran... 35 0.004
>tr|Q6UUM4|Q6UUM4_ORYSJ Putative uncharacterized protein (Putative polyprotein) OS=Oryza sativa subsp. japonica GN=OSJNBa0079I01.34 PE=4 SV=1 Length = 760
Score = 38.9 bits (89), Expect(2) = 2e-04 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = -2
Query: 197 GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 G + S T +V + E+ V + T+FSV+D +G+Y +LLGR W+ + +Q L Sbjct: 473 GSNPSETKEVLN--VELTVGNKTIPTTFSVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 530
Score = 28.9 bits (63), Expect(2) = 2e-04 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +++DGGA VN+M ++LG Sbjct: 431 KPMSKMMVDGGAAVNLMPYTTFRKLG 456
>tr|Q33A45|Q33A45_ORYSJ Retrotransposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g15340 PE=4 SV=1 Length = 828
Score = 37.4 bits (85), Expect(2) = 3e-04 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2
Query: 158 KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 K +I V + T+F V+D +G+YG+L GR W+ + + +Q+L Sbjct: 702 KIKITVGSKTVPTTFFVIDGKGSYGLLHGRDWIHANYCIPSTMHQSL 748
Score = 30.0 bits (66), Expect(2) = 3e-04 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +++DGGA VN+M ++LG Sbjct: 649 KPMSKILVDGGAAVNLMPYATFRKLG 674
>tr|Q8S5E4|Q8S5E4_ORYSA Putative uncharacterized protein OSJNBb0047B19.20 OS=Oryza sativa GN=OSJNBb0047B19.20 PE=4 SV=1 Length = 821
Score = 37.4 bits (85), Expect(2) = 3e-04 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2
Query: 158 KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 K +I V + T+F V+D +G+YG+L GR W+ + + +Q+L Sbjct: 695 KIKITVGSKTVPTTFFVIDGKGSYGLLHGRDWIHANYCIPSTMHQSL 741
Score = 30.0 bits (66), Expect(2) = 3e-04 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +++DGGA VN+M ++LG Sbjct: 642 KPMSKILVDGGAAVNLMPYATFRKLG 667
>tr|Q7XNI8|Q7XNI8_ORYSJ OSJNBb0032D24.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0032D24.5 PE=4 SV=1 Length = 1355
Score = 36.2 bits (82), Expect(2) = 4e-04 Identities = 20/60 (33%), Positives = 31/60 (51%) Frame = -2
Query: 197 GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 G +QS T V + E+ V + T+F V+D +G+Y +LLGR W+ + Q L Sbjct: 404 GGNQSETKGVLN--VELTVGSKTVPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMQQCL 461
Score = 30.8 bits (68), Expect(2) = 4e-04 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +PLS +I+DGGA VN+M ++LG Sbjct: 362 KPLSKMIVDGGAAVNLMPYATFRKLG 387
>tr|Q53KC9|Q53KC9_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g22340 PE=4 SV=1 Length = 1497
Score = 34.7 bits (78), Expect(2) = 8e-04 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2
Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 E+ V + T+F V+D +G+Y +LLGR W+ + +Q L Sbjct: 577 ELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 621
Score = 31.2 bits (69), Expect(2) = 8e-04 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +I+DGGA VN+M + ++LG Sbjct: 522 KPMSKMIVDGGAAVNLMPYAMFRKLG 547
>tr|Q53KG9|Q53KG9_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g25400 PE=4 SV=1 Length = 1163
Score = 36.6 bits (83), Expect(2) = 0.001 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2
Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 E+ V + T+F V+D +G+Y +LLGR W+ T + +Q L Sbjct: 930 ELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHTNCCIPSTMHQCL 974
Score = 28.9 bits (63), Expect(2) = 0.001 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +++DGGA VN+M ++LG Sbjct: 875 KPMSKMMVDGGAAVNLMPYATFRKLG 900
>tr|Q0KIL1|Q0KIL1_SOLDE Gag/pol polyprotein, 3'-partial, putative (Fragment) OS=Solanum demissum GN=SDM1_53t00001 PE=4 SV=1 Length = 907
Score = 37.4 bits (85), Expect(2) = 0.001 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -2
Query: 149 IRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTLTIE 9 +++ F +F VL++ +Y +LLGRPW+ AV +Q + E Sbjct: 391 LKIGHVDFTVNFQVLNINASYNLLLGRPWVHRAGAVPSTLHQMVKFE 437
Score = 28.1 bits (61), Expect(2) = 0.001 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -3
Query: 307 LSSVILDGGAGVNIMGVHLLQRLGIT--NLKPAPFKVRMADHRVVQATCMIE 158 ++ V++DGG+G NI + LQ+L + ++P VR D A IE Sbjct: 337 VTRVLIDGGSGANICPLSTLQKLNVNVERVRPNNVCVRAFDGTKTDAIGEIE 388
>tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0042N22.17 PE=4 SV=1 Length = 1436
Score = 36.2 bits (82), Expect(2) = 0.001 Identities = 20/60 (33%), Positives = 31/60 (51%) Frame = -2
Query: 197 GRSQSGTSDVYD*KYEIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 G + S T V + E+ V + TSF V+D +G+Y +LLGR W+ + +Q L Sbjct: 940 GGNSSETKGVLN--VELTVGSKTIPTSFFVIDGKGSYSLLLGRDWIHVNCCIPSTMHQCL 997
Score = 28.9 bits (63), Expect(2) = 0.001 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +++DGGA VN+M ++LG Sbjct: 898 KPMSKMMVDGGAAVNLMPYTTFRKLG 923
>tr|Q7G4P3|Q7G4P3_ORYSJ Retrotransposon protein, putative, unclassified (Reverse transcriptase (RNA-dependent DNA polymerase), putative) OS=Oryza sativa subsp. japonica GN=LOC_Os10g11190 PE=4 SV=1 Length = 1383
Score = 34.7 bits (78), Expect(2) = 0.002 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2
Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 E+ V + T+F V+D +G+Y +LLGR W+ + +Q L Sbjct: 714 ELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTMHQCL 758
Score = 30.0 bits (66), Expect(2) = 0.002 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +I+DGGA VN+M ++LG Sbjct: 659 KPMSKMIVDGGAAVNLMPYATFRKLG 684
>tr|Q8S6X2|Q8S6X2_ORYSA Putative pol polyprotein OS=Oryza sativa GN=OSJNBa0082N11.20 PE=4 SV=1 Length = 505
Score = 35.8 bits (81), Expect(2) = 0.002 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2
Query: 152 EIRVWREKFKTSFSVLDVQGAYGMLLGRPWLRTTHAVDDYANQTL 18 E+ + + T+F ++DVQG+Y ++LGR W+ V +Q L Sbjct: 386 ELTMGNKTLPTTFFIVDVQGSYNVILGRCWIHANCCVPSTLHQCL 430
Score = 28.9 bits (63), Expect(2) = 0.002 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3
Query: 313 EPLSSVILDGGAGVNIMGVHLLQRLG 236 +P+S +++D GA VN+M L +RLG Sbjct: 331 KPVSRMLVDRGAAVNLMPYSLFKRLG 356
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