BP917303 [AcEST]

BP917303
Clone id	YMU001_000099_A12
Library	YMU01
Length	402
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000099_A12.
Accession	BP917303
Tissue type	prothallium
Developmental stage	-
Contig ID	CL381Contig1
Sequence	GCTGTGCGTGTACATTCTTCTCTCTTGGGCGCTATTGTACTACAGGCAAGCTTCTGATTC TTCAACGAATCTGGCACATTTTCCTGATCAGTGATCGATCTCACGGAAACTGCAGCACAG ATTGGAGAAGACTCCCTTTGCCCTTCTTTACCGAGTTACAGAGTTCCGTTTGCCTCTATT ACGACTTGCAAGTAGCAAGGAAAGCATGGATATTTTGGAGTCCGTTTACTAGTTTCCAAA CCCCTGCTTATCAGGGCTTGTAAAGAATCCTACATTTTGACATTGCGACCTAGCGCAGTC AATTATCTGCATTGTTCATTGTGCCGTTCACTAGATCGTCCCTTGGTTGCAGGCCATCTA AATTCTAAATTCTTCTTGTCATCCTGAATGCATATAACAAGC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q82UJ6
Definition	sp\|Q82UJ6\|LIPB_NITEU Octanoyltransferase OS=Nitrosomonas europaea
Align length	48
Score (bit)	29.6
E-value	4.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917303\|Adiantum capillus-veneris mRNA, clone: YMU001_000099_A12. (402 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q82UJ6\|LIPB_NITEU Octanoyltransferase OS=Nitrosomonas europae... 30 4.8 >sp\|Q82UJ6\|LIPB_NITEU Octanoyltransferase OS=Nitrosomonas europaea GN=lipB PE=3 SV=1 Length = 204 Score = 29.6 bits (65), Expect = 4.8 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +1 Query: 166 PFASITTCK*QGKHGYFGVRLLVSKPLLIRACKESYILTLRPSAVNYL 309 PF +I C GY G+R+ +K L I CKE L S +N L Sbjct: 160 PFTAINPC------GYRGLRVTQAKDLGIADCKEMLATKLAQSFINQL 201
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917303\|Adiantum capillus-veneris mRNA, clone: YMU001_000099_A12. (402 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****