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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917304
Clone id YMU001_000099_B01
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCAATCCCAAGTACTATGATGGAAGCCACGTAAGGATGTTGGAAGTTCTGCTTGCTATGA
AGCATCTAGGATGTGATTTTGTTGTAGCTGGACGAGTAGTAGATGGGAAGTTTCTGGCAC
TTTCAGACTTGAGCATACCAGGTGAGCTGGAAGGAATGTTCAAAGCAATACCTACCGAAG
CATTTCGTGTGGATATGTCATCAACTGAAATTCGACAAAAAAGAAAAGCAGGTCTTCTTT
GAGATTTTCCACTTGGGTAGTAGATTGATTATCCTAGTTCCCTGTGCAGTATTAGGTCTT
GAGTTCAAGACTCGTCGGATAGATCTTTGAGGGGAGTTCCTAGCAACAGCTGGATGAAGG
TTTAGTTTATTTGTGGACAAGATCCTCAAAGGAAAAAGGGCCTAAAGAGCAATCCACTTA
TTGTCTGTACTGAACTTTGGTAATAAGAAAGGGTGGCATAATAGCTGTAGATATGCCCGC
ATATTCTAGTGCAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917304|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B01.
         (494 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A7P3D8
Definition tr|A7P3D8|A7P3D8_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera
Align length 73
Score (bit) 92.0
E-value 1.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917304|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B01.
         (494 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P3D8|A7P3D8_VITVI Chromosome chr1 scaffold_5, whole genome ...    92   1e-17
tr|B7FIH7|B7FIH7_MEDTR Putative uncharacterized protein OS=Medic...    91   4e-17
tr|Q8LFF6|Q8LFF6_ARATH Putative uncharacterized protein OS=Arabi...    87   4e-16
tr|Q8L845|Q8L845_ARATH Putative uncharacterized protein At2g0122...    87   4e-16
tr|Q8GX51|Q8GX51_ARATH Putative uncharacterized protein (Putativ...    87   4e-16
tr|Q5N7Q5|Q5N7Q5_ORYSJ Putative uncharacterized protein P0034C09...    84   3e-15
tr|B8A800|B8A800_ORYSI Putative uncharacterized protein OS=Oryza...    84   3e-15
tr|A9RSF7|A9RSF7_PHYPA Predicted protein OS=Physcomitrella paten...    84   3e-15
tr|A2ZWR9|A2ZWR9_ORYSJ Putative uncharacterized protein OS=Oryza...    84   3e-15
tr|B4FI85|B4FI85_MAIZE Cytidyltransferase-related OS=Zea mays PE...    84   4e-15
tr|A9S8Q0|A9S8Q0_PHYPA Predicted protein OS=Physcomitrella paten...    84   5e-15
tr|Q9LVX7|Q9LVX7_ARATH Gb|AAD14522.1 OS=Arabidopsis thaliana PE=...    83   8e-15
tr|Q84Q59|Q84Q59_ARATH At3g27610 (Putative uncharacterized prote...    83   8e-15
tr|Q9ZU44|Q9ZU44_ARATH Putative uncharacterized protein At2g0123...    70   5e-11
tr|A7NKY8|A7NKY8_ROSCS Putative uncharacterized protein OS=Rosei...    65   2e-09
tr|A8J963|A8J963_CHLRE Predicted protein OS=Chlamydomonas reinha...    65   2e-09
tr|A9WFD7|A9WFD7_CHLAA Putative uncharacterized protein OS=Chlor...    64   3e-09
tr|B2QND3|B2QND3_9CHLR Putative uncharacterized protein OS=Chlor...    64   3e-09
tr|B8G557|B8G557_9CHLR Putative uncharacterized protein OS=Chlor...    62   1e-08
tr|A5UTC4|A5UTC4_ROSS1 Putative uncharacterized protein OS=Rosei...    59   2e-07
tr|Q4DS12|Q4DS12_TRYCR Putative uncharacterized protein OS=Trypa...    58   2e-07
tr|Q4DGH9|Q4DGH9_TRYCR Putative uncharacterized protein OS=Trypa...    58   2e-07
tr|Q7N994|Q7N994_PHOLL Similarities with unknown protein OS=Phot...    53   7e-06
tr|B8C2V1|B8C2V1_THAPS Predicted protein OS=Thalassiosira pseudo...    50   8e-05
tr|Q4QCZ0|Q4QCZ0_LEIMA Putative uncharacterized protein OS=Leish...    48   3e-04
tr|A4HYR1|A4HYR1_LEIIN Putative uncharacterized protein OS=Leish...    45   0.001
tr|A3ZLJ4|A3ZLJ4_9PLAN Putative uncharacterized protein OS=Blast...    45   0.002
tr|B0EE51|B0EE51_ENTDI Putative uncharacterized protein OS=Entam...    42   0.016
tr|A4S776|A4S776_OSTLU Predicted protein OS=Ostreococcus lucimar...    42   0.021
tr|Q00VB5|Q00VB5_OSTTA Homology to unknown gene OS=Ostreococcus ...    39   0.17 

>tr|A7P3D8|A7P3D8_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030401001
           PE=4 SV=1
          Length = 391

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 45/73 (61%), Positives = 53/73 (72%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYYDGS+ +MLE+L   K  GC F+V GR +DG F  L DL IP EL+ MF  IP E 
Sbjct: 311 NPKYYDGSNQKMLEILGGCKRTGCIFLVGGRNIDGVFKVLEDLEIPEELKDMFIPIPAER 370

Query: 183 FRVDMSSTEIRQK 221
           FR+D+SSTEIRQK
Sbjct: 371 FRMDISSTEIRQK 383


>tr|B7FIH7|B7FIH7_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 382

 Score = 90.5 bits (223), Expect = 4e-17
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYYDG + +ML++L   K  GC F+VAGR VDG F  L DL++P E++ MF +IP E 
Sbjct: 307 NPKYYDGDYNKMLKILGGCKETGCTFLVAGRNVDGAFKVLDDLNVPEEIKDMFISIPAEQ 366

Query: 183 FRVDMSSTEIRQK 221
           FR+D+SSTEIR+K
Sbjct: 367 FRMDISSTEIRKK 379


>tr|Q8LFF6|Q8LFF6_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 387

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 43/77 (55%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY+GS  RMLE+L   K  GC F+V GR VDG F  L D+ IP E+  MF +IP + 
Sbjct: 309 NPKYYEGSIKRMLEILGDCKRTGCTFLVGGRNVDGVFKVLEDVDIPEEIIDMFISIPADI 368

Query: 183 FRVDMSSTEIRQKRKAG 233
           FR+D+SSTEIR+K+  G
Sbjct: 369 FRMDISSTEIRKKQGGG 385


>tr|Q8L845|Q8L845_ARATH Putative uncharacterized protein
           At2g01220:At2g01230 (Putative uncharacterized protein
           At2g01220) OS=Arabidopsis thaliana
           GN=At2g01220:At2g01230 PE=2 SV=1
          Length = 388

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 43/77 (55%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY+GS  RMLE+L   K  GC F+V GR VDG F  L D+ IP E+  MF +IP + 
Sbjct: 310 NPKYYEGSIKRMLEILGDCKRTGCTFLVGGRNVDGVFKVLEDVDIPEEIIDMFISIPADI 369

Query: 183 FRVDMSSTEIRQKRKAG 233
           FR+D+SSTEIR+K+  G
Sbjct: 370 FRMDISSTEIRKKQGGG 386


>tr|Q8GX51|Q8GX51_ARATH Putative uncharacterized protein (Putative
           uncharacterized protein At2g01220) OS=Arabidopsis
           thaliana GN=At2g01220 PE=2 SV=1
          Length = 388

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 43/77 (55%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY+GS  RMLE+L   K  GC F+V GR VDG F  L D+ IP E+  MF +IP + 
Sbjct: 310 NPKYYEGSIKRMLEILGDCKRTGCTFLVGGRNVDGVFKVLEDVDIPEEIIDMFISIPADI 369

Query: 183 FRVDMSSTEIRQKRKAG 233
           FR+D+SSTEIR+K+  G
Sbjct: 370 FRMDISSTEIRKKQGGG 386


>tr|Q5N7Q5|Q5N7Q5_ORYSJ Putative uncharacterized protein
           P0034C09.16-2 OS=Oryza sativa subsp. japonica
           GN=P0034C09.16-2 PE=4 SV=1
          Length = 250

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY G + RMLE+LL  K+ G  F+V GR ++G F  L DL IP EL  MF +IP E 
Sbjct: 175 NPKYYGGDYNRMLEILLECKNTGTTFLVGGRNIEGVFKVLEDLDIPVELREMFISIPEEK 234

Query: 183 FRVDMSSTEIRQKR 224
           FR+D+SST+IR+K+
Sbjct: 235 FRMDISSTDIRKKQ 248


>tr|B8A800|B8A800_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03345 PE=4 SV=1
          Length = 383

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY G + RMLE+LL  K+ G  F+V GR ++G F  L DL IP EL  MF +IP E 
Sbjct: 308 NPKYYGGDYNRMLEILLECKNTGTTFLVGGRNIEGVFKVLEDLDIPVELREMFISIPEEK 367

Query: 183 FRVDMSSTEIRQKR 224
           FR+D+SST+IR+K+
Sbjct: 368 FRMDISSTDIRKKQ 381


>tr|A9RSF7|A9RSF7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_177711 PE=4 SV=1
          Length = 387

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
 Frame = +3

Query: 9   KYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLA----LSDLSIPGELEGMFKAIPT 176
           KYY  S VRMLEVLL +  LGCDF+VAGR V+G F A    LSD+ +P E++ MF+ IP 
Sbjct: 310 KYYGDSKVRMLEVLLGINQLGCDFLVAGRKVNGTFQARPTVLSDIQVPSEVQSMFQEIPE 369

Query: 177 EAFRVDMSSTEIRQKR 224
             F+ D+SST++RQ R
Sbjct: 370 NLFQSDLSSTQLRQSR 385


>tr|A2ZWR9|A2ZWR9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_002991 PE=4 SV=1
          Length = 399

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY G + RMLE+LL  K+ G  F+V GR ++G F  L DL IP EL  MF +IP E 
Sbjct: 324 NPKYYGGDYNRMLEILLECKNTGTTFLVGGRNIEGVFKVLEDLDIPVELREMFISIPEEK 383

Query: 183 FRVDMSSTEIRQKR 224
           FR+D+SST+IR+K+
Sbjct: 384 FRMDISSTDIRKKQ 397


>tr|B4FI85|B4FI85_MAIZE Cytidyltransferase-related OS=Zea mays PE=2
           SV=1
          Length = 383

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +3

Query: 3   NPKYYDGSHVRMLEVLLAMKHLGCDFVVAGRVVDGKFLALSDLSIPGELEGMFKAIPTEA 182
           NPKYY G + RMLE+LL  K +G  F+V GR ++G F  L +L IP EL  MF +IP E 
Sbjct: 308 NPKYYGGDYNRMLEILLECKSIGTTFLVGGRKIEGDFKVLENLDIPEELREMFISIPEEK 367

Query: 183 FRVDMSSTEIRQKR 224
           FR+D+SSTEIR+ +
Sbjct: 368 FRIDISSTEIRKSQ 381