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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917305
Clone id YMU001_000099_B02
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGGGAACTATTACTGGATCTGGTCTCAGCTCCAAAGATGACACCACTCTTCTGCAGCCGA
GTGATATCATACACAATCGTCGCAACTCTATACACATCTACTCCTGAGTTTGTCAAATTC
ACTGCACTCCTGCCACTTCTTAGAAGAATCTTTATGACGCTTGTCTCAACTTTACTCAAA
TAGTTTCGCTGACACATAACTGAGAGCTCACTCATGAGCTGCCGCATCTCCAGCAGTATA
CTTAACAAACCTTCAGTTTCTTGCCCAAAGGTCTTGAACCTCTCCTTAATTTGACAGGTC
TTCATGTGAAGAATGCTCAGCCTTGCCACATCCCCACCTGCTGAGGTAGCAGCACCTGCG
CCCCCCAGTGCCAATCCAGCCACTGCAAGTGGGGCTGCAAGGCCAAATGTATAAAAGGAC
GCAACTATTCCTGCACCAGTCAACACTCCCCCAGCTATAGCAGCACTTCCACCTGCAAAA
GATCGCAGCGGATGTACATGAAGACTTGT
■■Homology search results ■■ -
sp_hit_id A8MXZ3
Definition sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like 3 OS=Homo sapiens
Align length 37
Score (bit) 33.9
E-value 0.46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917305|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B02.
         (509 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li...    34   0.46 
sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2       33   0.78 
sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo sap...    31   2.9  
sp|Q54WB6|PSMG1_DICDI Proteasome assembly chaperone 1 OS=Dictyos...    31   3.9  
sp|Q9BYQ0|KRA98_HUMAN Keratin-associated protein 9-8 OS=Homo sap...    30   5.0  
sp|O00237|RN103_HUMAN RING finger protein 103 OS=Homo sapiens GN...    30   8.6  
sp|Q9I4S5|PDXH_PSEAE Pyridoxine/pyridoxamine 5'-phosphate oxidas...    30   8.6  
sp|Q02IL5|PDXH_PSEAB Pyridoxine/pyridoxamine 5'-phosphate oxidas...    30   8.6  
sp|A6V9E9|PDXH_PSEA7 Pyridoxine/pyridoxamine 5'-phosphate oxidas...    30   8.6  
sp|Q5Z236|PDXH_NOCFA Pyridoxine/pyridoxamine 5'-phosphate oxidas...    30   8.6  
sp|B0BU37|PDXH_ACTPJ Pyridoxine/pyridoxamine 5'-phosphate oxidas...    30   8.6  
sp|A3N3U7|PDXH_ACTP2 Pyridoxine/pyridoxamine 5'-phosphate oxidas...    30   8.6  
sp|Q9BYR0|KRA47_HUMAN Keratin-associated protein 4-7 OS=Homo sap...    30   8.6  
sp|A8MTL4|KR41X_HUMAN Putative keratin-associated protein 4-X OS...    30   8.6  

>sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like
           3 OS=Homo sapiens PE=3 SV=1
          Length = 250

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 321 PCHIPTC*GSSTCAPQC-QSSHCKWGCKAKCIKGRNY 428
           PC  PTC GSS C+  C +SS+C   C+  C +   Y
Sbjct: 189 PCCQPTCGGSSCCSQTCNESSYCLPCCRPTCCQTTCY 225



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 333 PTC*GSSTCAPQCQSSHCKWGCKAKC 410
           PTC GSS C P C  + C+  C++ C
Sbjct: 151 PTCCGSSCCQPCCHPTCCQTICRSTC 176


>sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2
          Length = 5146

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 282  LLNLTGLHVKNAQPCHIPTC*GSSTC-APQCQSSHCKW 392
            L N TG      +PC++P+C     C  P C++ +C W
Sbjct: 3904 LANCTGGAASQERPCNLPSCTELPLCPGPGCEAGNCSW 3941


>sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo
           sapiens GN=KRTAP9-4 PE=2 SV=1
          Length = 154

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGC 398
           QPC  PTC  ++ C P C +S C+  C
Sbjct: 49  QPCCRPTCCQNTCCQPTCVTSCCQPSC 75


>sp|Q54WB6|PSMG1_DICDI Proteasome assembly chaperone 1
           OS=Dictyostelium discoideum GN=psmg1 PE=3 SV=1
          Length = 272

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 45  TLLQPSDIIHNRRNSIHIYS*VCQIHCTPATS*KNLYDACLNFTQIVSLT 194
           T L+ S+II N   S   +  +CQ+   PA S  NLY++ LN   + S T
Sbjct: 184 TPLESSNIIENLSAS---FLTICQVKYIPACSILNLYESHLNIESVQSFT 230


>sp|Q9BYQ0|KRA98_HUMAN Keratin-associated protein 9-8 OS=Homo
           sapiens GN=KRTAP9-8 PE=2 SV=1
          Length = 159

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGC 398
           QPC  PTC  ++ C P C +S C+  C
Sbjct: 44  QPCCRPTCCQNTCCQPICVTSCCQPSC 70


>sp|O00237|RN103_HUMAN RING finger protein 103 OS=Homo sapiens
           GN=RNF103 PE=2 SV=1
          Length = 685

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = -3

Query: 429 NSCVLLYIWPCS----PTCSGWIGTGGRRCCYLSRWGCGKAE--HSSHEDLSN 289
           N C+L+ + PC       C      GGR CC + RW   K +  ++ H+ LSN
Sbjct: 630 NGCLLMGL-PCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQHQPLSN 681


>sp|Q9I4S5|PDXH_PSEAE Pyridoxine/pyridoxamine 5'-phosphate oxidase
           OS=Pseudomonas aeruginosa GN=pdxH PE=3 SV=1
          Length = 215

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
           HWG   LLPQ++  WQG
Sbjct: 174 HWGGYRLLPQRIEFWQG 190


>sp|Q02IL5|PDXH_PSEAB Pyridoxine/pyridoxamine 5'-phosphate oxidase
           OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pdxH
           PE=3 SV=1
          Length = 215

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
           HWG   LLPQ++  WQG
Sbjct: 174 HWGGYRLLPQRIEFWQG 190


>sp|A6V9E9|PDXH_PSEA7 Pyridoxine/pyridoxamine 5'-phosphate oxidase
           OS=Pseudomonas aeruginosa (strain PA7) GN=pdxH PE=3 SV=1
          Length = 215

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
           HWG   LLPQ++  WQG
Sbjct: 174 HWGGYRLLPQRIEFWQG 190


>sp|Q5Z236|PDXH_NOCFA Pyridoxine/pyridoxamine 5'-phosphate oxidase
           OS=Nocardia farcinica GN=pdxH PE=3 SV=2
          Length = 225

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 370 HWGAQVLLPQQVGMWQG 320
           HWG  +L P+QV  WQG
Sbjct: 184 HWGGYLLRPEQVEFWQG 200
tr_hit_id Q9D3H7
Definition tr|Q9D3H7|Q9D3H7_MOUSE Novel member of the keratin associated protein 9 (Krtap9) family OS=Mus musculus
Align length 32
Score (bit) 35.0
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917305|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B02.
         (509 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9D3H7|Q9D3H7_MOUSE Novel member of the keratin associated pr...    35   2.1  
tr|Q9D141|Q9D141_MOUSE Novel member of the keratin associated pr...    35   2.1  
tr|Q64526|Q64526_MOUSE Keratin associated protein 9-1 OS=Mus mus...    35   2.1  
tr|A2A4M2|A2A4M2_MOUSE Novel member of the keratin associated pr...    35   2.1  
tr|Q7NPR8|Q7NPR8_CHRVO Putative uncharacterized protein OS=Chrom...    35   2.1  
tr|B1EQC6|B1EQC6_9ESCH Sensor protein OS=Escherichia albertii TW...    35   2.1  
tr|A2VEC8|A2VEC8_CANFA SCO-spondin OS=Canis familiaris GN=sspo P...    35   2.1  
tr|Q8FB08|Q8FB08_ECOL6 Sensor protein OS=Escherichia coli O6 GN=...    34   3.6  
tr|Q1R3L7|Q1R3L7_ECOUT Sensor protein OS=Escherichia coli (strai...    34   3.6  
tr|Q0T9Z9|Q0T9Z9_ECOL5 Sensor protein OS=Escherichia coli O6:K15...    34   3.6  
tr|A1AIP4|A1AIP4_ECOK1 Sensor protein OS=Escherichia coli O1:K1 ...    34   3.6  
tr|B8JU58|B8JU58_ECOLX Putative transport sensor protein OS=Esch...    34   3.6  
tr|B7UPM3|B7UPM3_ECO27 Predicted sensory histidine kinase in two...    34   3.6  
tr|B7N2S0|B7N2S0_ECOLX Putative C4-dicarboxylate transport senso...    34   3.6  
tr|B7MJ59|B7MJ59_ECOLX Putative C4-dicarboxylate transport senso...    34   3.6  
tr|B3HRT9|B3HRT9_ECOLX Putative transport sensor protein OS=Esch...    34   3.6  
tr|B6JXI5|B6JXI5_SCHJP Proteasome component OS=Schizosaccharomyc...    34   3.6  
tr|B7LL37|B7LL37_ESCFE Putative C4-dicarboxylate transport senso...    34   4.7  
tr|A8JGD5|A8JGD5_CHLRE Predicted protein OS=Chlamydomonas reinha...    34   4.7  
tr|A5M8V6|A5M8V6_STRPN Inositol-5-monophosphate dehydrogenase OS...    33   6.1  
tr|Q9XSV8|Q9XSV8_BOVIN SCO-spondin (Fragment) OS=Bos taurus GN=s...    33   8.0  

>tr|Q9D3H7|Q9D3H7_MOUSE Novel member of the keratin associated
           protein 9 (Krtap9) family OS=Mus musculus
           GN=OTTMUSG00000002191 PE=2 SV=1
          Length = 191

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
           QPC  P+C GSS C P CQ++ C+   +  C+
Sbjct: 35  QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|Q9D141|Q9D141_MOUSE Novel member of the keratin associated
           protein 9 (Krtap9) family OS=Mus musculus
           GN=OTTMUSG00000002206 PE=2 SV=1
          Length = 195

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
           QPC  P+C GSS C P CQ++ C+   +  C+
Sbjct: 35  QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|Q64526|Q64526_MOUSE Keratin associated protein 9-1 OS=Mus
           musculus GN=Krtap9-1 PE=2 SV=1
          Length = 186

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
           QPC  P+C GSS C P CQ++ C+   +  C+
Sbjct: 35  QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|A2A4M2|A2A4M2_MOUSE Novel member of the keratin associated
           protein 9 (Krtap9) family OS=Mus musculus
           GN=OTTMUSG00000002191 PE=4 SV=1
          Length = 211

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 318 QPCHIPTC*GSSTCAPQCQSSHCKWGCKAKCI 413
           QPC  P+C GSS C P CQ++ C+   +  C+
Sbjct: 35  QPCCQPSCCGSSCCQPCCQTTCCRTCFQPCCV 66


>tr|Q7NPR8|Q7NPR8_CHRVO Putative uncharacterized protein
           OS=Chromobacterium violaceum GN=CV_3090 PE=4 SV=1
          Length = 127

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 20/56 (35%), Positives = 23/56 (41%)
 Frame = -3

Query: 471 WKCCYSWGSVDWCRNSCVLLYIWPCSPTCSGWIGTGGRRCCYLSRWGCGKAEHSSH 304
           W+C   W S+  CR +     I        GWI T   RCC LS   C    HS H
Sbjct: 2   WQCSGVWASIAACRTASNWPPIRRMPALPGGWIRTS--RCCRLSMLCCCLESHSMH 55


>tr|B1EQC6|B1EQC6_9ESCH Sensor protein OS=Escherichia albertii
           TW07627 GN=ESCAB7627_3817 PE=4 SV=1
          Length = 607

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = -1

Query: 287 KERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSAVNLTN 108
           KE +    Q  + ++S++  M QL+SEL     R+ + K    VIK++     SAV+L N
Sbjct: 416 KEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SAVSLLN 471

Query: 107 SGVD 96
             ++
Sbjct: 472 HSME 475


>tr|A2VEC8|A2VEC8_CANFA SCO-spondin OS=Canis familiaris GN=sspo PE=2
            SV=1
          Length = 5110

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 282  LLNLTGLHVKNAQPCHIPTC*GSSTC-APQCQSSHCKW 392
            L N TG      +PC++P+C   S C +P C + +C W
Sbjct: 3868 LANCTGGEASQERPCNLPSCTEPSPCPSPGCVAGNCSW 3905


>tr|Q8FB08|Q8FB08_ECOL6 Sensor protein OS=Escherichia coli O6
           GN=c5041 PE=4 SV=1
          Length = 606

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -1

Query: 302 KTCQIKERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSA 123
           +T   KE +    Q  + ++S++  M QL+SEL     R+ + K    VIK++     SA
Sbjct: 411 RTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SA 466

Query: 122 VNLTNSGVD 96
           V L N  ++
Sbjct: 467 VALLNHSME 475


>tr|Q1R3L7|Q1R3L7_ECOUT Sensor protein OS=Escherichia coli (strain
           UTI89 / UPEC) GN=UTI89_C4639 PE=4 SV=1
          Length = 606

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -1

Query: 302 KTCQIKERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSA 123
           +T   KE +    Q  + ++S++  M QL+SEL     R+ + K    VIK++     SA
Sbjct: 411 RTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SA 466

Query: 122 VNLTNSGVD 96
           V L N  ++
Sbjct: 467 VALLNHSME 475


>tr|Q0T9Z9|Q0T9Z9_ECOL5 Sensor protein OS=Escherichia coli
           O6:K15:H31 (strain 536 / UPEC) GN=ECP_4282 PE=4 SV=1
          Length = 606

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -1

Query: 302 KTCQIKERFKTFGQETEGLLSILLEMRQLMSELSVMCQRNYLSKVETSVIKILLRSGRSA 123
           +T   KE +    Q  + ++S++  M QL+SEL     R+ + K    VIK++     SA
Sbjct: 411 RTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMY----SA 466

Query: 122 VNLTNSGVD 96
           V L N  ++
Sbjct: 467 VALLNHSME 475