BP917309
Clone id YMU001_000099_B08
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AACACCAACATCTTATTCTTAGAGAACAAGGTTGTATTGATTTTACATTAAGGCAAAAGG
CTCACTTTAACAAGAGTAAGTGGCACCTTAGCATGGCAATGCTAATAGCAAGAGAATGAC
ACAAGCTCTTTCTAACATTTTTCGATGATCACAATATAGGAACCTCTTCTCATCTTGGTT
TACCTAATTTGAAATGATCATAGTTGTCATGCCTCTCTGAGAGCTGAAATTAATTATCTA
GTGTAGGAGGCTGATTATACGCGATCTCCAGGCCGGGCATGTGTCCGAGACTTTCTATCA
CGCTCAGCCTGTAAAGACTCATATGCTCGCTTCAAGGATCAAGCTCTGCCTTCTTCAAAA
GCATATATTATGCACCAAATTCTGGTTTTGTCTGTTTGTAAGCTGCAGCAACCATGTCAT
CTGTACTCAGACATCAACGTGGGAGGTATGAGGTCATCATCAATCATTCGAACTTCAGAT
TCATCATCATT
■■Homology search results ■■ -
sp_hit_id O42839
Definition sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4 OS=Schizosaccharomyces pombe
Align length 38
Score (bit) 29.6
E-value 7.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917309|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B08.
(491 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4 OS=Sch... 30 7.8

>sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4
OS=Schizosaccharomyces pombe GN=cut20 PE=1 SV=2
Length = 719

Score = 29.6 bits (65), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2

Query: 353 LQKHILCTKFWFCLFVSCSNHVICTQTST---WEV*GH 457
L++ ILC ++CSNH+IC ++++ W+V H
Sbjct: 30 LKRVILCPSMELIAILTCSNHLICCRSNSQRIWDVDFH 67


tr_hit_id B6KBB2
Definition tr|B6KBB2|B6KBB2_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 21
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917309|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B08.
(491 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KBB2|B6KBB2_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.3

>tr|B6KBB2|B6KBB2_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_058820 PE=4 SV=1
Length = 129

Score = 32.7 bits (73), Expect = 9.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1

Query: 461 DDDLIPPTLMSEYR*HGCCSL 399
D +L+PP ++YR HGCCSL
Sbjct: 84 DYELLPPEQQAQYRGHGCCSL 104