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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917309
Clone id YMU001_000099_B08
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACACCAACATCTTATTCTTAGAGAACAAGGTTGTATTGATTTTACATTAAGGCAAAAGG
CTCACTTTAACAAGAGTAAGTGGCACCTTAGCATGGCAATGCTAATAGCAAGAGAATGAC
ACAAGCTCTTTCTAACATTTTTCGATGATCACAATATAGGAACCTCTTCTCATCTTGGTT
TACCTAATTTGAAATGATCATAGTTGTCATGCCTCTCTGAGAGCTGAAATTAATTATCTA
GTGTAGGAGGCTGATTATACGCGATCTCCAGGCCGGGCATGTGTCCGAGACTTTCTATCA
CGCTCAGCCTGTAAAGACTCATATGCTCGCTTCAAGGATCAAGCTCTGCCTTCTTCAAAA
GCATATATTATGCACCAAATTCTGGTTTTGTCTGTTTGTAAGCTGCAGCAACCATGTCAT
CTGTACTCAGACATCAACGTGGGAGGTATGAGGTCATCATCAATCATTCGAACTTCAGAT
TCATCATCATT
■■Homology search results ■■ -
sp_hit_id O42839
Definition sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4 OS=Schizosaccharomyces pombe
Align length 38
Score (bit) 29.6
E-value 7.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917309|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B08.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4 OS=Sch...    30   7.8  

>sp|O42839|APC4_SCHPO Anaphase-promoting complex subunit 4
           OS=Schizosaccharomyces pombe GN=cut20 PE=1 SV=2
          Length = 719

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +2

Query: 353 LQKHILCTKFWFCLFVSCSNHVICTQTST---WEV*GH 457
           L++ ILC        ++CSNH+IC ++++   W+V  H
Sbjct: 30  LKRVILCPSMELIAILTCSNHLICCRSNSQRIWDVDFH 67
tr_hit_id B6KBB2
Definition tr|B6KBB2|B6KBB2_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 21
Score (bit) 32.7
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917309|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B08.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KBB2|B6KBB2_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.3  

>tr|B6KBB2|B6KBB2_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_058820 PE=4 SV=1
          Length = 129

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 461 DDDLIPPTLMSEYR*HGCCSL 399
           D +L+PP   ++YR HGCCSL
Sbjct: 84  DYELLPPEQQAQYRGHGCCSL 104