BP917316
Clone id YMU001_000099_C08
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAGGACTATCTATCTTAAAACTTATGATGCAGGCATATATGACATTTAACTGATTCCAAG
TAATTAATGTTTTATGTAATTTTGCAATCCTCAAGAGAAACTTGCAAAAGGGAGCCATTA
CAGGTGATTAATCACAACTCCCAAGATCCATGTCTTTCTGTGATCAGGAAATATGAGAGA
GAAGGAAAGAGGAAACAAAGGGAACATATGCAGGGTGAGCGAGGACATCATGCCCTCAAT
GATGAGGAGAAAAAGAAAATCTCCTCCGAGACAGTGATAGTTTTCAAGAGGAGGATTGAA
GGTTTGGGTACAGAAGTGAAATGGGAAATCTGAAATCTAGTTGCTGACTATCTTGTTGTT
CAGGCAATCCACCGTCATTCTTCAGTGGAGGAGGCTACTGTATATAACTCAATCGTCTCC
AATGTCCGCAACACATTGGCTACTGTCAAGCAGCCAA
■■Homology search results ■■ -
sp_hit_id P15924
Definition sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens
Align length 63
Score (bit) 33.9
E-value 0.35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917316|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_C08.
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3 34 0.35
sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=H... 32 1.0
sp|Q66H38|FA71B_RAT Protein FAM71B OS=Rattus norvegicus GN=Fam71... 32 1.3
sp|Q8N9V7|YC009_HUMAN Uncharacterized protein FLJ36157 OS=Homo s... 30 5.0
sp|Q7V100|Y1094_PROMP UPF0176 protein PMM1094 OS=Prochlorococcus... 30 6.4
sp|Q8BI84|MIA3_MOUSE Melanoma inhibitory activity protein 3 OS=M... 30 6.6
sp|Q0P5X1|LRIQ1_MOUSE IQ domain-containing protein LRRIQ1 OS=Mus... 29 8.6

>sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3
Length = 2871

Score = 33.9 bits (76), Expect = 0.35
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1

Query: 82 LQSSRETCKREPLQVINHNSQDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKI 261
L+ R + K + +++ N Q S+++K + R+QR+ + G EE +++
Sbjct: 1598 LEGMRRSLKEQAIKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRL 1657

Query: 262 SSE 270
SSE
Sbjct: 1658 SSE 1660


>sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=Homo
sapiens GN=MIA3 PE=1 SV=1
Length = 1907

Score = 32.3 bits (72), Expect = 1.0
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1

Query: 109 REPLQVINHNSQDPCLSVIRKYE------------REGKRKQREHMQGERGHHALNDEEK 252
R LQ +D C ++ +K E + K Q E+ + ER H +EK
Sbjct: 1499 RNSLQAAKAGLEDECKTLRQKVEILNELYQQKEMALQKKLSQEEYERQEREHRLSAADEK 1558

Query: 253 KKISSETVIVFKRRIEGLGTEVK 321
++E V +KRRIE + E++
Sbjct: 1559 AVSAAEEVKTYKRRIEEMEDELQ 1581


>sp|Q66H38|FA71B_RAT Protein FAM71B OS=Rattus norvegicus GN=Fam71b
PE=2 SV=1
Length = 647

Score = 32.0 bits (71), Expect = 1.3
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1

Query: 82 LQSSRETCKREPLQVINHNSQDPCLS--VIRKYEREGKRKQREHMQGERGHHALNDEEKK 255
LQS C+R+ Q ++H S + R+ +R+G RK H + H+ + ++ +
Sbjct: 456 LQSEGYMCERDGSQKVSHTSSETQKEKRERRESDRKGSRKSSHHQRTGASRHSSSKDKGR 515

Query: 256 KISS 267
K SS
Sbjct: 516 KTSS 519


>sp|Q8N9V7|YC009_HUMAN Uncharacterized protein FLJ36157 OS=Homo
sapiens PE=2 SV=2
Length = 1692

Score = 30.0 bits (66), Expect = 5.0
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +1

Query: 43 HLTDSK*LMFYVILQSSRETCKREPLQ-----VINHNSQDPCLSVIRKYEREGKRKQREH 207
HLTDSK L+ + +++ E+ +E L + + ++ +P L VI++ + +K +
Sbjct: 540 HLTDSKLLLQSSLTETNTESSSKEKLDSNSNCLSSVSAVEPTLMVIKEPIIKDDKKIKSE 599

Query: 208 MQGERGHHAL-NDEEKKKISSET 273
RG + N E +++SET
Sbjct: 600 ELSRRGSEVISNTTEDTQLTSET 622


>sp|Q7V100|Y1094_PROMP UPF0176 protein PMM1094 OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1378 / MED4)
GN=PMM1094 PE=3 SV=1
Length = 310

Score = 29.6 bits (65), Expect = 6.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -3

Query: 197 CFLFPSLSYFLITERHGSWEL*LITCNGSLLQVSLEDCKIT*NINYLESVKCHICLHHKF 18
CF+F + GS+ + C+ + +S+ED K N Y E ++CH C+ +KF
Sbjct: 231 CFVFDKRVALDHELKQGSYSI----CHACGMPISIEDQK---NKEYREGIQCHFCV-NKF 282

Query: 17 *D 12
D
Sbjct: 283 SD 284


>sp|Q8BI84|MIA3_MOUSE Melanoma inhibitory activity protein 3 OS=Mus
musculus GN=Mia3 PE=1 SV=2
Length = 1930

Score = 29.6 bits (65), Expect = 6.6
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1

Query: 109 REPLQVINHNSQDPCLSVIRKYE------------REGKRKQREHMQGERGHHALNDEEK 252
R LQ +D C ++ +K E + K Q E+ + +R +EK
Sbjct: 1526 RSSLQTAKAGLEDECKTLRQKVEILNELYQQKEMALQKKLSQEEYERQDREQRLTAADEK 1585

Query: 253 KKISSETVIVFKRRIEGLGTEVK 321
+++E V +KRRIE + E++
Sbjct: 1586 VVLAAEEVKTYKRRIEEMEEELQ 1608


>sp|Q0P5X1|LRIQ1_MOUSE IQ domain-containing protein LRRIQ1 OS=Mus
musculus GN=Lrriq1 PE=2 SV=1
Length = 814

Score = 29.3 bits (64), Expect = 8.6
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1

Query: 106 KREPLQVINHNSQDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKIS----SET 273
+++ L+ + QD + K E+ K K R+H + R H +EE+ ++S E
Sbjct: 225 EKKHLEDLQKQDQDKMNDELHKEEKIWKEKYRQHEEHIRNLHLKMEEERTRLSELQEKEK 284

Query: 274 VIVFKRRIE 300
+FK R +
Sbjct: 285 ARLFKLRYD 293


tr_hit_id Q7K0T1
Definition tr|Q7K0T1|Q7K0T1_DROME LD35220p (Fragment) OS=Drosophila melanogaster
Align length 56
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917316|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_C08.
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7K0T1|Q7K0T1_DROME LD35220p (Fragment) OS=Drosophila melanog... 34 3.2
tr|Q29KH2|Q29KH2_DROPS GA17651 OS=Drosophila pseudoobscura pseud... 34 3.2
tr|P91636|P91636_DROME RAD54 protein OS=Drosophila melanogaster ... 34 3.2
tr|O76460|O76460_DROME Okra OS=Drosophila melanogaster GN=okr PE... 34 3.2
tr|B4GS98|B4GS98_DROPE GL26701 OS=Drosophila persimilis GN=GL267... 34 3.2
tr|B6W3U6|B6W3U6_9BACE Putative uncharacterized protein OS=Bacte... 34 4.1
tr|Q22AS1|Q22AS1_TETTH Putative uncharacterized protein OS=Tetra... 34 4.1
tr|B4L1H2|B4L1H2_DROMO GI15317 OS=Drosophila mojavensis GN=GI153... 34 4.1
tr|B3NAN8|B3NAN8_DROER GG24469 OS=Drosophila erecta GN=GG24469 P... 34 4.1
tr|A6LS35|A6LS35_CLOB8 SMC domain protein OS=Clostridium beijeri... 33 5.4
tr|B4PAH6|B4PAH6_DROYA GE12667 OS=Drosophila yakuba GN=GE12667 P... 33 5.4
tr|Q871Y4|Q871Y4_NEUCR Related to leucine permease transcription... 33 5.4
tr|O04577|O04577_ARATH F19K23.5 protein OS=Arabidopsis thaliana ... 33 9.2
tr|B4NXB8|B4NXB8_DROYA GE14966 OS=Drosophila yakuba GN=GE14966 P... 33 9.2
tr|B4N6K8|B4N6K8_DROWI GK12332 OS=Drosophila willistoni GN=GK123... 33 9.2
tr|B7XJG2|B7XJG2_9MICR Serine/threonine protein kinase OS=Entero... 33 9.2

>tr|Q7K0T1|Q7K0T1_DROME LD35220p (Fragment) OS=Drosophila
melanogaster GN=okr PE=2 SV=1
Length = 788

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1

Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228
++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+
Sbjct: 126 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 181


>tr|Q29KH2|Q29KH2_DROPS GA17651 OS=Drosophila pseudoobscura
pseudoobscura GN=GA17651 PE=4 SV=2
Length = 782

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1

Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228
++++ + E EP V+ H DP LS ++R ++REG R E ++G+RG+
Sbjct: 118 VLYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 173


>tr|P91636|P91636_DROME RAD54 protein OS=Drosophila melanogaster
GN=okr PE=2 SV=1
Length = 784

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1

Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228
++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+
Sbjct: 122 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177


>tr|O76460|O76460_DROME Okra OS=Drosophila melanogaster GN=okr PE=1
SV=1
Length = 784

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1

Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228
++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+
Sbjct: 122 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177


>tr|B4GS98|B4GS98_DROPE GL26701 OS=Drosophila persimilis GN=GL26701
PE=4 SV=1
Length = 782

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1

Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228
++++ + E EP V+ H DP LS ++R ++REG R E ++G+RG+
Sbjct: 118 VLYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 173


>tr|B6W3U6|B6W3U6_9BACE Putative uncharacterized protein
OS=Bacteroides dorei DSM 17855 GN=BACDOR_04241 PE=4 SV=1
Length = 303

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1

Query: 91 SRETCKREPLQVINHNSQDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKISSE 270
SR+TCK +++ S D L + K+ E K R H Q +G HA ++ + I +E
Sbjct: 34 SRQTCKDFIWLIVDDGSTDDTLEWVEKWIAERKIDIRYHYQENQGMHAAHNTAYRLIDTE 93


>tr|Q22AS1|Q22AS1_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01164170 PE=4
SV=1
Length = 1454

Score = 33.9 bits (76), Expect = 4.1
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Frame = +1

Query: 142 QDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKISSETVIVFKRR-------IE 300
QD SVI+KY + K+ +H+ G +N+E +KK S TV + + I
Sbjct: 546 QDYKQSVIKKYIEKAKKFYDKHL----GDVDINEENRKKFDSNTVGTYTLKKMQKYDSII 601

Query: 301 GLGTEVKWEI*NLVADYLV--VQAIHRHSSVEEATVYNSIVSNVRNTLATVK 450
G +I NLV ++ V +++ +EE + IVS + + L K
Sbjct: 602 GSRASKVNQILNLVQKRVIYGVDSVYYDGPIEENDFFEQIVSILNSELKDFK 653


>tr|B4L1H2|B4L1H2_DROMO GI15317 OS=Drosophila mojavensis GN=GI15317
PE=4 SV=1
Length = 520

Score = 33.9 bits (76), Expect = 4.1
Identities = 29/106 (27%), Positives = 45/106 (42%)
Frame = +1

Query: 136 NSQDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKISSETVIVFKRRIEGLGTE 315
+S P + R + G +Q+E LN +E+ + TV+ K RIEG
Sbjct: 69 SSAQPADATFRAASQNGAEQQQE----------LNQDEQ--LEQRTVLSLKYRIEGTPAP 116

Query: 316 VKWEI*NLVADYLVVQAIHRHSSVEEATVYNSIVSNVRNTLATVKQ 453
+KWE +L + V+ +RH S+ NV L VK+
Sbjct: 117 LKWEW-HLTSTDSVLLTFYRHMLKNALYTAASLSKNVHYLLDIVKK 161


>tr|B3NAN8|B3NAN8_DROER GG24469 OS=Drosophila erecta GN=GG24469 PE=4
SV=1
Length = 784

Score = 33.9 bits (76), Expect = 4.1
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1

Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228
++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+
Sbjct: 122 VLFHPPAYTEHERMGMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177


>tr|A6LS35|A6LS35_CLOB8 SMC domain protein OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=Cbei_0981 PE=4 SV=1
Length = 1163

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1

Query: 133 HNSQDPCLSVIRKYEREGKRKQREHMQGE-----RGHHALNDEEKKKISSETVIVFKRRI 297
+ + + +S I KY+ KRK+ E Q E G ++L+D +K I E + +K ++
Sbjct: 853 NENNERLISAISKYKELSKRKKDEEAQLEVAIDSEGFNSLDDVKKNIIGKEEINDYKLKV 912

Query: 298 EGLGTEV 318
E +EV
Sbjct: 913 ESYKSEV 919