BP917316 |
Clone id |
YMU001_000099_C08 |
Library |
YMU01 |
Length |
457 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000099_C08. |
Accession |
BP917316 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TAGGACTATCTATCTTAAAACTTATGATGCAGGCATATATGACATTTAACTGATTCCAAG TAATTAATGTTTTATGTAATTTTGCAATCCTCAAGAGAAACTTGCAAAAGGGAGCCATTA CAGGTGATTAATCACAACTCCCAAGATCCATGTCTTTCTGTGATCAGGAAATATGAGAGA GAAGGAAAGAGGAAACAAAGGGAACATATGCAGGGTGAGCGAGGACATCATGCCCTCAAT GATGAGGAGAAAAAGAAAATCTCCTCCGAGACAGTGATAGTTTTCAAGAGGAGGATTGAA GGTTTGGGTACAGAAGTGAAATGGGAAATCTGAAATCTAGTTGCTGACTATCTTGTTGTT CAGGCAATCCACCGTCATTCTTCAGTGGAGGAGGCTACTGTATATAACTCAATCGTCTCC AATGTCCGCAACACATTGGCTACTGTCAAGCAGCCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P15924 |
Definition |
sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens |
Align length |
63 |
Score (bit) |
33.9 |
E-value |
0.35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7K0T1 |
Definition |
tr|Q7K0T1|Q7K0T1_DROME LD35220p (Fragment) OS=Drosophila melanogaster |
Align length |
56 |
Score (bit) |
34.3 |
E-value |
3.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917316|Adiantum capillus-veneris mRNA, clone: YMU001_000099_C08. (457 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7K0T1|Q7K0T1_DROME LD35220p (Fragment) OS=Drosophila melanog... 34 3.2 tr|Q29KH2|Q29KH2_DROPS GA17651 OS=Drosophila pseudoobscura pseud... 34 3.2 tr|P91636|P91636_DROME RAD54 protein OS=Drosophila melanogaster ... 34 3.2 tr|O76460|O76460_DROME Okra OS=Drosophila melanogaster GN=okr PE... 34 3.2 tr|B4GS98|B4GS98_DROPE GL26701 OS=Drosophila persimilis GN=GL267... 34 3.2 tr|B6W3U6|B6W3U6_9BACE Putative uncharacterized protein OS=Bacte... 34 4.1 tr|Q22AS1|Q22AS1_TETTH Putative uncharacterized protein OS=Tetra... 34 4.1 tr|B4L1H2|B4L1H2_DROMO GI15317 OS=Drosophila mojavensis GN=GI153... 34 4.1 tr|B3NAN8|B3NAN8_DROER GG24469 OS=Drosophila erecta GN=GG24469 P... 34 4.1 tr|A6LS35|A6LS35_CLOB8 SMC domain protein OS=Clostridium beijeri... 33 5.4 tr|B4PAH6|B4PAH6_DROYA GE12667 OS=Drosophila yakuba GN=GE12667 P... 33 5.4 tr|Q871Y4|Q871Y4_NEUCR Related to leucine permease transcription... 33 5.4 tr|O04577|O04577_ARATH F19K23.5 protein OS=Arabidopsis thaliana ... 33 9.2 tr|B4NXB8|B4NXB8_DROYA GE14966 OS=Drosophila yakuba GN=GE14966 P... 33 9.2 tr|B4N6K8|B4N6K8_DROWI GK12332 OS=Drosophila willistoni GN=GK123... 33 9.2 tr|B7XJG2|B7XJG2_9MICR Serine/threonine protein kinase OS=Entero... 33 9.2
>tr|Q7K0T1|Q7K0T1_DROME LD35220p (Fragment) OS=Drosophila melanogaster GN=okr PE=2 SV=1 Length = 788
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1
Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228 ++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+ Sbjct: 126 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 181
>tr|Q29KH2|Q29KH2_DROPS GA17651 OS=Drosophila pseudoobscura pseudoobscura GN=GA17651 PE=4 SV=2 Length = 782
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +1
Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228 ++++ + E EP V+ H DP LS ++R ++REG R E ++G+RG+ Sbjct: 118 VLYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 173
>tr|P91636|P91636_DROME RAD54 protein OS=Drosophila melanogaster GN=okr PE=2 SV=1 Length = 784
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1
Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228 ++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+ Sbjct: 122 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177
>tr|O76460|O76460_DROME Okra OS=Drosophila melanogaster GN=okr PE=1 SV=1 Length = 784
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1
Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228 ++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+ Sbjct: 122 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177
>tr|B4GS98|B4GS98_DROPE GL26701 OS=Drosophila persimilis GN=GL26701 PE=4 SV=1 Length = 782
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +1
Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228 ++++ + E EP V+ H DP LS ++R ++REG R E ++G+RG+ Sbjct: 118 VLYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 173
>tr|B6W3U6|B6W3U6_9BACE Putative uncharacterized protein OS=Bacteroides dorei DSM 17855 GN=BACDOR_04241 PE=4 SV=1 Length = 303
Score = 33.9 bits (76), Expect = 4.1 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = +1
Query: 91 SRETCKREPLQVINHNSQDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKISSE 270 SR+TCK +++ S D L + K+ E K R H Q +G HA ++ + I +E Sbjct: 34 SRQTCKDFIWLIVDDGSTDDTLEWVEKWIAERKIDIRYHYQENQGMHAAHNTAYRLIDTE 93
>tr|Q22AS1|Q22AS1_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_01164170 PE=4 SV=1 Length = 1454
Score = 33.9 bits (76), Expect = 4.1 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 9/112 (8%) Frame = +1
Query: 142 QDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKISSETVIVFKRR-------IE 300 QD SVI+KY + K+ +H+ G +N+E +KK S TV + + I Sbjct: 546 QDYKQSVIKKYIEKAKKFYDKHL----GDVDINEENRKKFDSNTVGTYTLKKMQKYDSII 601
Query: 301 GLGTEVKWEI*NLVADYLV--VQAIHRHSSVEEATVYNSIVSNVRNTLATVK 450 G +I NLV ++ V +++ +EE + IVS + + L K Sbjct: 602 GSRASKVNQILNLVQKRVIYGVDSVYYDGPIEENDFFEQIVSILNSELKDFK 653
>tr|B4L1H2|B4L1H2_DROMO GI15317 OS=Drosophila mojavensis GN=GI15317 PE=4 SV=1 Length = 520
Score = 33.9 bits (76), Expect = 4.1 Identities = 29/106 (27%), Positives = 45/106 (42%) Frame = +1
Query: 136 NSQDPCLSVIRKYEREGKRKQREHMQGERGHHALNDEEKKKISSETVIVFKRRIEGLGTE 315 +S P + R + G +Q+E LN +E+ + TV+ K RIEG Sbjct: 69 SSAQPADATFRAASQNGAEQQQE----------LNQDEQ--LEQRTVLSLKYRIEGTPAP 116
Query: 316 VKWEI*NLVADYLVVQAIHRHSSVEEATVYNSIVSNVRNTLATVKQ 453 +KWE +L + V+ +RH S+ NV L VK+ Sbjct: 117 LKWEW-HLTSTDSVLLTFYRHMLKNALYTAASLSKNVHYLLDIVKK 161
>tr|B3NAN8|B3NAN8_DROER GG24469 OS=Drosophila erecta GN=GG24469 PE=4 SV=1 Length = 784
Score = 33.9 bits (76), Expect = 4.1 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1
Query: 64 LMFYVILQSSRETCKREPLQVINHNSQDPCLS-VIRKYEREGKRKQREHMQGERGH 228 ++F+ + E +P +V+ H DP LS ++R ++REG R E ++G+RG+ Sbjct: 122 VLFHPPAYTEHERMGMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177
>tr|A6LS35|A6LS35_CLOB8 SMC domain protein OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=Cbei_0981 PE=4 SV=1 Length = 1163
Score = 33.5 bits (75), Expect = 5.4 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Frame = +1
Query: 133 HNSQDPCLSVIRKYEREGKRKQREHMQGE-----RGHHALNDEEKKKISSETVIVFKRRI 297 + + + +S I KY+ KRK+ E Q E G ++L+D +K I E + +K ++ Sbjct: 853 NENNERLISAISKYKELSKRKKDEEAQLEVAIDSEGFNSLDDVKKNIIGKEEINDYKLKV 912
Query: 298 EGLGTEV 318 E +EV Sbjct: 913 ESYKSEV 919
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