BP917317
Clone id YMU001_000099_C09
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGTACCTGCGAGAGAGAGAGAATTATTGTGGAGAAAGGAAGCTCTGTGTACGTACGCTT
AAGCAACCATGCAACTCCAACTTGTAATCGACTTTTTCTCATGATTGGATTTCAATTCCA
AACCTTGCATTGTGTTCCTCTTCTCTTGCTCTTTCATGCAAGTGTAAGCGTTTCAAGTTC
TATCGAGGTTTGTGACTTCGCATCTGCGAGCCTAAACTTCAGTTTCGAGTGCTTAAATCA
TTGTTTTATGACATTTTGATCATAGGAGAGTGTGATGAGACCTTAGGGCAGCCTATTTGG
ACTGTGCTGTTACAGTTTCTAAGGCTTGGTACATGATGAATCACAATTTTGGTACCTTGT
AAGATTGCAAGCAGATTTTGTAGAGTTGTCCCCTTATACCTAATGTAGTTTCCCTTAAAG
TTTCATGACAATCCGAGTTTGTGAAGTCATCCAAATGGCGTGATGACCTAGAGC
■■Homology search results ■■ -
sp_hit_id Q63472
Definition sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H member 1 OS=Rattus norvegicus
Align length 37
Score (bit) 32.3
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917317|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_C09.
(474 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H ... 32 1.1
sp|Q60603|KCNH1_MOUSE Potassium voltage-gated channel subfamily ... 32 1.1
sp|O95259|KCNH1_HUMAN Potassium voltage-gated channel subfamily ... 32 1.1
sp|O18965|KCNH1_BOVIN Potassium voltage-gated channel subfamily ... 32 1.1
sp|Q9EPI9|KCNH5_RAT Potassium voltage-gated channel subfamily H ... 31 2.4
sp|Q920E3|KCNH5_MOUSE Potassium voltage-gated channel subfamily ... 31 2.4
sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channel subfamily ... 31 2.4

>sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H
member 1 OS=Rattus norvegicus GN=Kcnh1 PE=1 SV=1
Length = 962

Score = 32.3 bits (72), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 566 LAMEFQTVHCAPGDLIYHAGESVDS---LCFVVSGSL 599


>sp|Q60603|KCNH1_MOUSE Potassium voltage-gated channel subfamily H
member 1 OS=Mus musculus GN=Kcnh1 PE=2 SV=1
Length = 989

Score = 32.3 bits (72), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 593 LAMEFQTVHCAPGDLIYHAGESVDS---LCFVVSGSL 626


>sp|O95259|KCNH1_HUMAN Potassium voltage-gated channel subfamily H
member 1 OS=Homo sapiens GN=KCNH1 PE=1 SV=1
Length = 989

Score = 32.3 bits (72), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 593 LAMEFQTVHCAPGDLIYHAGESVDS---LCFVVSGSL 626


>sp|O18965|KCNH1_BOVIN Potassium voltage-gated channel subfamily H
member 1 OS=Bos taurus GN=KCNH1 PE=2 SV=2
Length = 987

Score = 32.3 bits (72), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 593 LAMEFQTVHCAPGDLIYHAGESVDS---LCFVVSGSL 626


>sp|Q9EPI9|KCNH5_RAT Potassium voltage-gated channel subfamily H
member 5 OS=Rattus norvegicus GN=Kcnh5 PE=2 SV=1
Length = 988

Score = 31.2 bits (69), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV + +C S SL
Sbjct: 562 LAVEFQTIHCAPGDLIYHAGESVDA---LCFVVSGSL 595


>sp|Q920E3|KCNH5_MOUSE Potassium voltage-gated channel subfamily H
member 5 OS=Mus musculus GN=Kcnh5 PE=2 SV=2
Length = 988

Score = 31.2 bits (69), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV + +C S SL
Sbjct: 562 LAVEFQTIHCAPGDLIYHAGESVDA---LCFVVSGSL 595


>sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channel subfamily H
member 5 OS=Homo sapiens GN=KCNH5 PE=2 SV=2
Length = 988

Score = 31.2 bits (69), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV + +C S SL
Sbjct: 562 LAVEFQTIHCAPGDLIYHAGESVDA---LCFVVSGSL 595


tr_hit_id Q4SQM6
Definition tr|Q4SQM6|Q4SQM6_TETNG Chromosome 17 SCAF14532, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 37
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917317|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_C09.
(474 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4SQM6|Q4SQM6_TETNG Chromosome 17 SCAF14532, whole genome sho... 33 9.3
tr|Q108P3|Q108P3_DANRE Potassium voltage-gated channel subfamily... 33 9.3
tr|B3DHL9|B3DHL9_DANRE Potassium voltage-gated channel, subfamil... 33 9.3
tr|A6CR06|A6CR06_9BACI Putative uncharacterized protein OS=Bacil... 33 9.3

>tr|Q4SQM6|Q4SQM6_TETNG Chromosome 17 SCAF14532, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00014307001 PE=4 SV=1
Length = 961

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 564 LAMEFQTIHCAPGDLIYHAGESVDS---LCFVVSGSL 597


>tr|Q108P3|Q108P3_DANRE Potassium voltage-gated channel subfamily H
member 1 OS=Danio rerio GN=kcnh1 PE=2 SV=1
Length = 959

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 564 LAMEFQTIHCAPGDLIYHAGESVDS---LCFVVSGSL 597


>tr|B3DHL9|B3DHL9_DANRE Potassium voltage-gated channel, subfamily H
(Eag-related), member 1 OS=Danio rerio GN=kcnh1 PE=2
SV=1
Length = 959

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2

Query: 104 IGFQFQTLHCVPLLLLFHASVSVSSSIEVCDFASASL 214
+ +FQT+HC P L++HA SV S +C S SL
Sbjct: 564 LAMEFQTIHCAPGDLIYHAGESVDS---LCFVVSGSL 597


>tr|A6CR06|A6CR06_9BACI Putative uncharacterized protein OS=Bacillus
sp. SG-1 GN=BSG1_20890 PE=4 SV=1
Length = 481

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3

Query: 139 RNTMQGLELKSNHEKKSITSWSCMVA*AYVHRASFLHNN 23
R+ ++ L +K+NH K +T S ++ A H AS LH+N
Sbjct: 206 RSYLELLNVKANHRKVVVTDQSALITSANPHNASGLHSN 244