BP917320
Clone id YMU001_000099_D01
Library
Length 468
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGGACGAGGGGTAATCACTTGCTGCCATAGATAGCTAGAAGAGGGAGCACCCTGATTTT
GGCCCTTGCTTAAACAGATGGCTGTCCACTTATGAAGTGGGCAGTTAGCCACTTGTCAAA
AAGGTCTGCACCTATTCAAAACACAATACAACCTGATGAGCTGAAAATAATGCTTGCACA
AACACACTCCAGGAGTCCCTGGATGAAATATCATGATCAGATGCAATGCAAACATAGACT
CCTTTATGGGAAAGCATCTACATTTCCGGAAAGCACTCAAAAAGCAACCTCCTTTGCAGA
AAGCATTGCATTTCTTCAAAGCTTCTCAAAACCTATCTTCATGCATGTGCTTGAATCTTA
CGCGTAACTCATACTCGGTTGGGATTCCCTCCAACCATGAAATATTCCCTAACCAATGCT
CCCGTCACGCATCTTGTGACGCATCAACAATATCCATTACTCGGTCTT
■■Homology search results ■■ -
sp_hit_id P31213
Definition sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens
Align length 72
Score (bit) 33.9
E-value 0.36
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917320|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D01.
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=... 34 0.36
sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=... 30 4.0
sp|P35194|UTP20_YEAST U3 small nucleolar RNA-associated protein ... 30 5.2

>sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2
OS=Homo sapiens GN=SRD5A2 PE=1 SV=1
Length = 254

Score = 33.9 bits (76), Expect = 0.36
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3

Query: 253 FPIKESMFALHLIMIFHPGTPGVCL----CKHYFQLIRLYCVLNRCRPF*QVANCPLHKW 86
F + + A + +F P PG L C HYF +Y +LNR RP+ + + +
Sbjct: 61 FAVPAGILARQPLSLFGP--PGTVLLGLFCVHYFHRTFVYSLLNRGRPYPAIL---ILRG 115

Query: 85 TAICLSKGQNQG 50
TA C G QG
Sbjct: 116 TAFCTGNGVLQG 127


>sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2
OS=Macaca fascicularis GN=SRD5A2 PE=1 SV=1
Length = 254

Score = 30.4 bits (67), Expect = 4.0
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = -3

Query: 253 FPIKESMFALHLIMIFHPGTPGVCL----CKHYFQLIRLYCVLNRCRPF*QVANCPLHKW 86
F + + A + +F P PG L C HYF +Y +LNR RP+ V + +
Sbjct: 61 FAVPAGILARQPLSLFGP--PGTVLLGLFCVHYFHRTFVYSLLNRGRPYPAVL---IFRG 115

Query: 85 TAICLSKG 62
A C G
Sbjct: 116 IAFCAGNG 123


>sp|P35194|UTP20_YEAST U3 small nucleolar RNA-associated protein 20
OS=Saccharomyces cerevisiae GN=UTP20 PE=1 SV=3
Length = 2493

Score = 30.0 bits (66), Expect = 5.2
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2

Query: 134 IQNTIQPDELKIMLAQTHSRSPWMKYHDQ---MQCKHRLLYGKASTFPESTQKATSFAES 304
+ +T+ DE+ L + S+S +K D+ M R+ +G+A P S QK +
Sbjct: 892 LDDTLFKDEITTFLTENGSQS--IKAEDEKVVMPYVLRIFFGRAQVPPTSGQKRSRKIAV 949

Query: 305 IAFLQSFSKP 334
I+ L +F KP
Sbjct: 950 ISVLPNFKKP 959


tr_hit_id Q22AV1
Definition tr|Q22AV1|Q22AV1_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 51
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917320|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D01.
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q22AV1|Q22AV1_TETTH Putative uncharacterized protein OS=Tetra... 34 3.2
tr|B2RE87|B2RE87_HUMAN Putative uncharacterized protein OS=Homo ... 34 4.2
tr|B2W0W7|B2W0W7_PYRTR Putative uncharacterized protein OS=Pyren... 33 7.2
tr|A0BZ50|A0BZ50_PARTE Chromosome undetermined scaffold_138, who... 33 9.4

>tr|Q22AV1|Q22AV1_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01151590 PE=4
SV=1
Length = 1090

Score = 34.3 bits (77), Expect = 3.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2

Query: 209 YHDQMQCKHRLLYGKASTFPESTQKATSFAESIAFLQSFSKPIFMHVLESY 361
Y+DQM LYG A+ ++TQK T + + F++ + K + LE +
Sbjct: 902 YNDQMASNATSLYGGAAFLLDNTQKNTKMEQCLEFIRKYDKEFSVEDLEEH 952


>tr|B2RE87|B2RE87_HUMAN Putative uncharacterized protein OS=Homo
sapiens GN=SRD5A2 PE=2 SV=1
Length = 254

Score = 33.9 bits (76), Expect = 4.2
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3

Query: 253 FPIKESMFALHLIMIFHPGTPGVCL----CKHYFQLIRLYCVLNRCRPF*QVANCPLHKW 86
F + + A + +F P PG L C HYF +Y +LNR RP+ + + +
Sbjct: 61 FAVPAGILARQPLSLFGP--PGTVLLGLFCVHYFHRTFVYSLLNRGRPYPAIL---ILRG 115

Query: 85 TAICLSKGQNQG 50
TA C G QG
Sbjct: 116 TAFCTGNGVLQG 127


>tr|B2W0W7|B2W0W7_PYRTR Putative uncharacterized protein
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_04102 PE=4 SV=1
Length = 500

Score = 33.1 bits (74), Expect = 7.2
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2

Query: 86 PLMKWAVSHLSKRSAPIQNTIQPD----ELKIMLAQTHSRSPWMKYHDQMQCKHRLLYG- 250
P++K A + L K +A ++N Q D E K MLA WMKY M + +G
Sbjct: 279 PIVKAAENSLDKAAAAVENKAQADAPAPESKPMLASLGDTETWMKY---MTLGYGTAWGG 335

Query: 251 -KASTFPESTQKATSFAESIA 310
K + PE A + A S A
Sbjct: 336 RKTTETPEPAVPAPALAPSRA 356


>tr|A0BZ50|A0BZ50_PARTE Chromosome undetermined scaffold_138, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00033670001 PE=4 SV=1
Length = 4267

Score = 32.7 bits (73), Expect = 9.4
Identities = 14/27 (51%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +3

Query: 294 LQKALHFFKAS-QNLSSCMCLNLTRNS 371
L+KALHF+K + +NL C+CLN ++ S
Sbjct: 398 LEKALHFYKRNGKNLIHCLCLNTSKRS 424