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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917321
Clone id YMU001_000099_D02
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTAGAGTGCCAGTGGTCAACCCCCTAACCAACAGAAGCATAGCGTTAAAACATGAGATTA
CCTAGGAATCTTTCTTACAAAAATTGCTGATGGGCCAAGAGGTGCTTTAGCTCAAACACC
TGTTGGATACATTGGCTCTGAAAAACAAAGTTTTAACAGGTAAATGTGAACAACCTACAG
CACCTTTTCTTAGCCTGTATAATTCAATTAGGGGCCATCCTGCTGGGAGCGGCTGCAAAA
ATCTCAGAAAAAACTAAGTAGAACATACCTTCCCAAGCAGAGCACCGTGAGCTGTTGGAA
GCAATGCCAGGGGCCGGGTGTGCAAAACAGTTGCTAAGGTGGTGACAGCATCTGTACTAC
TCTCTACTAAGTCTCTTTCTCGCTTGTTCCATATATGGAGAAGTTCATGCGAGGGAGCTG
TGCCAATAAGACCCGGATGTATCAATCCAGGAAAGCGGACACCTGGAATGTGGCGGGATT
GTGCAAA
■■Homology search results ■■ -
sp_hit_id Q9URY7
Definition sp|Q9URY7|FMDA_SCHPO Putative formamidase C869.04 OS=Schizosaccharomyces pombe
Align length 72
Score (bit) 71.2
E-value 2.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917321|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D02.
         (487 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9URY7|FMDA_SCHPO Putative formamidase C869.04 OS=Schizosacch...    71   2e-12
sp|Q50228|FMDA_METME Formamidase OS=Methylophilus methylotrophus...    70   4e-12
sp|Q07838|AMDA_MYCSM Acetamidase OS=Mycobacterium smegmatis GN=a...    67   3e-11
sp|Q59ZW2|IML2_CANAL Mitochondrial outer membrane protein IML2 O...    30   5.8  
sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sa...    30   5.8  
sp|Q8BYG9|EPHAA_MOUSE Ephrin type-A receptor 10 OS=Mus musculus ...    30   7.5  
sp|Q96R06|SPAG5_HUMAN Sperm-associated antigen 5 OS=Homo sapiens...    29   9.9  
sp|Q5PQ92|CA074_XENLA Uncharacterized protein C1orf74 homolog OS...    29   9.9  

>sp|Q9URY7|FMDA_SCHPO Putative formamidase C869.04
           OS=Schizosaccharomyces pombe GN=SPAC869.04 PE=2 SV=1
          Length = 410

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 38/72 (52%), Positives = 44/72 (61%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           F  SRHIPGVRFPGLIHPG+IGTAPS E+L  WN+RE  LV  +  +         T  +
Sbjct: 136 FCSSRHIPGVRFPGLIHPGIIGTAPSKEILAEWNRREGALVAENPHS---------THVM 186

Query: 307 ALLPTAHGALLG 272
           A LP A  A  G
Sbjct: 187 AQLPNASYAFAG 198


>sp|Q50228|FMDA_METME Formamidase OS=Methylophilus methylotrophus
           GN=fmdA PE=1 SV=1
          Length = 407

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/74 (45%), Positives = 46/74 (62%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +  SRH+P VR+ G++HPGLIG  PS ELL  WNKRE DL+ +  D V          PL
Sbjct: 135 YTTSRHVPKVRYAGIMHPGLIGCLPSKELLDTWNKREGDLIATDPDRVP---------PL 185

Query: 307 ALLPTAHGALLGKV 266
           A  PT+  A++G++
Sbjct: 186 ACPPTSQSAVMGRL 199


>sp|Q07838|AMDA_MYCSM Acetamidase OS=Mycobacterium smegmatis GN=amdA
           PE=1 SV=2
          Length = 406

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 35/69 (50%), Positives = 42/69 (60%)
 Frame = -1

Query: 478 SRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPLALL 299
           SRH+PGVR+ G+ HPGL GTAPS +LL  WN+RER L+ +  D V          PLAL 
Sbjct: 146 SRHVPGVRYTGITHPGLFGTAPSPDLLAKWNERERALIATDPDRVP---------PLALP 196

Query: 298 PTAHGALLG 272
           P   G L G
Sbjct: 197 PLVDGTLGG 205


>sp|Q59ZW2|IML2_CANAL Mitochondrial outer membrane protein IML2
           OS=Candida albicans GN=IML2 PE=3 SV=1
          Length = 866

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -1

Query: 481 QSRHIPG--VRFPGLIHPGLIGTAPSHELLHIWNKRER 374
           +SRHI     ++P L    ++GT+  HEL++ WN   R
Sbjct: 665 KSRHIEARKKKYPNLPTADIVGTSLIHELIYFWNGYNR 702


>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens
            GN=DNAH14 PE=2 SV=3
          Length = 3507

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -1

Query: 460  VRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPLALLPTAHGA 281
            V F GL    L+ T  +HE+ H+ ++R + L   S DA+T     L  + L LL  A G+
Sbjct: 2609 VTFQGL-QDQLLSTVVTHEVPHLEDQRSKLLESISLDAIT--LEELEEKTLNLLQKALGS 2665

Query: 280  LL 275
            +L
Sbjct: 2666 IL 2667


>sp|Q8BYG9|EPHAA_MOUSE Ephrin type-A receptor 10 OS=Mus musculus
           GN=Epha10 PE=2 SV=2
          Length = 1007

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 279 RAP*AVGSNARGRVCKTVAKVVTASVLLSTKSLSRLFHIWRSSCEG 416
           + P  V   +R +    V  VVT S LL   S+  +  IWR  C+G
Sbjct: 550 QTPGEVAPGSRDQSPAVVVTVVTISALLVLGSVMSVLAIWRRPCDG 595


>sp|Q96R06|SPAG5_HUMAN Sperm-associated antigen 5 OS=Homo sapiens
            GN=SPAG5 PE=1 SV=2
          Length = 1193

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 20   PPNQQKHSVKT*DYLGIFLTKIADGPRGALAQTPVGYIGSEKQSFNR 160
            PP Q+        +LG  LT +AD    +   TPV  +GS+K +F R
Sbjct: 908  PPTQEHPLPNDRTFLGSILTAVADEEPES---TPVPLLGSDKSAFTR 951


>sp|Q5PQ92|CA074_XENLA Uncharacterized protein C1orf74 homolog
           OS=Xenopus laevis PE=2 SV=2
          Length = 262

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -1

Query: 400 LHIWNKRERDLVESSTDAVTTLATVLHTRPLALLPTAH 287
           LHI N  E  L+ + T AV+ L T+LH++ L L+  ++
Sbjct: 75  LHILNVEETILIINVTKAVSYLETLLHSQDLHLIDVSN 112
tr_hit_id A9TBD0
Definition tr|A9TBD0|A9TBD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 74
Score (bit) 108.0
E-value 2.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917321|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D02.
         (487 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TBD0|A9TBD0_PHYPA Predicted protein OS=Physcomitrella paten...   108   2e-22
tr|A8JBG4|A8JBG4_CHLRE Formamidase OS=Chlamydomonas reinhardtii ...   107   4e-22
tr|B8LQX8|B8LQX8_PICSI Putative uncharacterized protein OS=Picea...    97   3e-19
tr|A9NM92|A9NM92_PICSI Putative uncharacterized protein OS=Picea...    97   3e-19
tr|Q8LCZ3|Q8LCZ3_ARATH Formamidase-like protein OS=Arabidopsis t...    96   9e-19
tr|Q2V3B3|Q2V3B3_ARATH Uncharacterized protein At4g37550.2 OS=Ar...    96   9e-19
tr|Q94CA8|Q94CA8_ARATH Putative formamidase OS=Arabidopsis thali...    94   3e-18
tr|Q8H1G4|Q8H1G4_ARATH Putative formamidase OS=Arabidopsis thali...    94   3e-18
tr|B7FKV4|B7FKV4_MEDTR Putative uncharacterized protein OS=Medic...    93   8e-18
tr|A7PLP2|A7PLP2_VITVI Chromosome chr7 scaffold_20, whole genome...    92   1e-17
tr|A5APD0|A5APD0_VITVI Putative uncharacterized protein OS=Vitis...    92   1e-17
tr|A7PLN9|A7PLN9_VITVI Chromosome chr7 scaffold_20, whole genome...    92   2e-17
tr|A5APC8|A5APC8_VITVI Putative uncharacterized protein OS=Vitis...    92   2e-17
tr|B4FYX5|B4FYX5_MAIZE Putative uncharacterized protein OS=Zea m...    91   2e-17
tr|Q0JJ18|Q0JJ18_ORYSJ Os01g0764900 protein OS=Oryza sativa subs...    91   4e-17
tr|B8AA43|B8AA43_ORYSI Putative uncharacterized protein OS=Oryza...    91   4e-17
tr|A2ZY52|A2ZY52_ORYSJ Putative uncharacterized protein OS=Oryza...    91   4e-17
tr|B4FL47|B4FL47_MAIZE Putative uncharacterized protein OS=Zea m...    89   1e-16
tr|B7FYS6|B7FYS6_PHATR Formidase OS=Phaeodactylum tricornutum CC...    88   2e-16
tr|A7PLP1|A7PLP1_VITVI Chromosome chr7 scaffold_20, whole genome...    88   2e-16
tr|A5APC9|A5APC9_VITVI Putative uncharacterized protein OS=Vitis...    88   2e-16
tr|B8AA41|B8AA41_ORYSI Putative uncharacterized protein OS=Oryza...    83   6e-15
tr|A3YWW6|A3YWW6_9SYNE Formamidase OS=Synechococcus sp. WH 5701 ...    81   3e-14
tr|B8PRP8|B8PRP8_EMIHU Putative formamidase (Fragment) OS=Emilia...    81   3e-14
tr|Q2JS29|Q2JS29_SYNJA Acetamidase/formamidase family protein OS...    79   1e-13
tr|B8PGJ0|B8PGJ0_9APHY Predicted protein OS=Postia placenta Mad-...    78   3e-13
tr|B8NZC2|B8NZC2_9APHY Predicted protein OS=Postia placenta Mad-...    78   3e-13
tr|B5W045|B5W045_SPIMA Formamidase OS=Arthrospira maxima CS-328 ...    75   1e-12
tr|Q1ASQ3|Q1ASQ3_RUBXD Formamidase OS=Rubrobacter xylanophilus (...    75   2e-12
tr|B2GIX0|B2GIX0_KOCRD Acetamidase/formamidase OS=Kocuria rhizop...    74   4e-12

>tr|A9TBD0|A9TBD0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220670 PE=4 SV=1
          Length = 452

 Score =  108 bits (269), Expect = 2e-22
 Identities = 55/74 (74%), Positives = 60/74 (81%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A SRHIPGVRFPGLIHPGLIGTAPS ELL IWNKRE+ LV+   +A+ TL   LHTRPL
Sbjct: 146 WASSRHIPGVRFPGLIHPGLIGTAPSKELLDIWNKREKALVDDGENAL-TLGKHLHTRPL 204

Query: 307 ALLPTAHGALLGKV 266
           ALLP   GALLGKV
Sbjct: 205 ALLPQTQGALLGKV 218


>tr|A8JBG4|A8JBG4_CHLRE Formamidase OS=Chlamydomonas reinhardtii
           GN=AMI1 PE=4 SV=1
          Length = 455

 Score =  107 bits (266), Expect = 4e-22
 Identities = 54/74 (72%), Positives = 60/74 (81%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A SRHIPGVRF GLIHPGLIGTAPSHELL IWN+RE  LVE+  ++ TTL  VLHTRPL
Sbjct: 145 YASSRHIPGVRFAGLIHPGLIGTAPSHELLKIWNEREGALVEAGENS-TTLGGVLHTRPL 203

Query: 307 ALLPTAHGALLGKV 266
           ALLP   GALLG +
Sbjct: 204 ALLPEPKGALLGDI 217


>tr|B8LQX8|B8LQX8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 451

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 51/74 (68%), Positives = 53/74 (71%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           FA S HIPGVRFPGLIHPGLIGTAPS ELL IWN RE  LV  S     TL  +LH RPL
Sbjct: 145 FAYSPHIPGVRFPGLIHPGLIGTAPSKELLDIWNAREASLVNGSVQP-PTLCDILHQRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT  G+LLG V
Sbjct: 204 ANLPTPKGSLLGLV 217


>tr|A9NM92|A9NM92_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 309

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 51/74 (68%), Positives = 53/74 (71%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           FA S HIPGVRFPGLIHPGLIGTAPS ELL IWN RE  LV  S     TL  +LH RPL
Sbjct: 145 FAYSPHIPGVRFPGLIHPGLIGTAPSKELLDIWNAREASLVNGSVQP-PTLCDILHQRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT  G+LLG V
Sbjct: 204 ANLPTPKGSLLGLV 217


>tr|Q8LCZ3|Q8LCZ3_ARATH Formamidase-like protein OS=Arabidopsis
           thaliana PE=2 SV=1
          Length = 452

 Score = 95.9 bits (237), Expect = 9e-19
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A S  IPGVRFPGL HPG+IGTAPS+ELL IWN RER L ES  +++ TL  V+H RPL
Sbjct: 145 YAYSPQIPGVRFPGLTHPGVIGTAPSNELLRIWNDRERQLEESGVESL-TLCEVVHQRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT  G LLG +
Sbjct: 204 ACLPTTKGCLLGNI 217


>tr|Q2V3B3|Q2V3B3_ARATH Uncharacterized protein At4g37550.2
           OS=Arabidopsis thaliana GN=At4g37550 PE=4 SV=1
          Length = 382

 Score = 95.9 bits (237), Expect = 9e-19
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A S  IPGVRFPGL HPG+IGTAPS+ELL IWN RER L ES  +++ TL  V+H RPL
Sbjct: 145 YAYSPQIPGVRFPGLTHPGVIGTAPSNELLRIWNDRERQLEESGVESL-TLCEVVHQRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT  G LLG +
Sbjct: 204 ACLPTTKGCLLGNI 217


>tr|Q94CA8|Q94CA8_ARATH Putative formamidase OS=Arabidopsis thaliana
           GN=At4g37560 PE=2 SV=1
          Length = 452

 Score = 94.4 bits (233), Expect = 3e-18
 Identities = 46/74 (62%), Positives = 54/74 (72%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A S  IPGVRFPGL HPG+IGTAPS ELL IWN+RER L E   +++ TL  V+H RPL
Sbjct: 145 YAYSPQIPGVRFPGLTHPGIIGTAPSKELLRIWNERERQLEEKGVESL-TLCEVVHQRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT  G LLG +
Sbjct: 204 ASLPTTKGCLLGNI 217


>tr|Q8H1G4|Q8H1G4_ARATH Putative formamidase OS=Arabidopsis thaliana
           GN=At4g37560 PE=2 SV=1
          Length = 452

 Score = 94.4 bits (233), Expect = 3e-18
 Identities = 46/74 (62%), Positives = 54/74 (72%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A S  IPGVRFPGL HPG+IGTAPS ELL IWN+RER L E   +++ TL  V+H RPL
Sbjct: 145 YAYSPQIPGVRFPGLTHPGIIGTAPSKELLRIWNERERQLEEKGVESL-TLCEVVHQRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT  G LLG +
Sbjct: 204 ASLPTTKGCLLGNI 217


>tr|B7FKV4|B7FKV4_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 452

 Score = 92.8 bits (229), Expect = 8e-18
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A S  IPGVRFPG+ HPG+IGTAPS ELL+IWN+RERD+ E+   ++  L  VLH+RPL
Sbjct: 145 YAYSPQIPGVRFPGITHPGIIGTAPSMELLNIWNERERDVAENGIHSL-KLCEVLHSRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LPT    LLGK+
Sbjct: 204 ANLPTEKSCLLGKI 217


>tr|A7PLP2|A7PLP2_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019648001
           PE=4 SV=1
          Length = 451

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 46/74 (62%), Positives = 55/74 (74%)
 Frame = -1

Query: 487 FAQSRHIPGVRFPGLIHPGLIGTAPSHELLHIWNKRERDLVESSTDAVTTLATVLHTRPL 308
           +A S HIPGVRFPGL HPG+IGTAPS ELL+IWN+RER L E+    +  L  VLH+RPL
Sbjct: 145 YAYSPHIPGVRFPGLTHPGVIGTAPSMELLNIWNERERQLEENGLKTL-KLCEVLHSRPL 203

Query: 307 ALLPTAHGALLGKV 266
           A LP+  G  LGK+
Sbjct: 204 ANLPSTKGCHLGKI 217