BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917323|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D04.
         (433 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM10...    28   0.60 
sp|P42975|BIRA_BACSU Bifunctional protein birA OS=Bacillus subti...    31   1.9  
sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing prot...    31   1.9  
sp|Q5TGY3|AHDC1_HUMAN A.T hook DNA-binding motif-containing prot...    31   2.5  
sp|P49144|5HT1B_RABIT 5-hydroxytryptamine receptor 1B OS=Oryctol...    30   3.2  
sp|P79250|5HT1B_CANFA 5-hydroxytryptamine receptor 1B OS=Canis f...    30   4.2  
sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium disc...    30   5.5  
sp|Q5M9Q1|NKAPL_HUMAN NKAP-like protein OS=Homo sapiens GN=NKAPL...    29   7.1  
sp|Q6XXX8|5HT1B_VULVU 5-hydroxytryptamine receptor 1B OS=Vulpes ...    29   7.1  
sp|Q6PF18|MORN3_HUMAN MORN repeat-containing protein 3 OS=Homo s...    29   9.3  
sp|P56496|5HT1B_SPAEH 5-hydroxytryptamine receptor 1B OS=Spalax ...    29   9.3  
sp|P28564|5HT1B_RAT 5-hydroxytryptamine receptor 1B OS=Rattus no...    29   9.3  
sp|P28334|5HT1B_MOUSE 5-hydroxytryptamine receptor 1B OS=Mus mus...    29   9.3  

>sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM101
           OS=Paracoccidioides brasiliensis GN=pacC PE=3 SV=2
          Length = 706

 Score = 28.5 bits (62), Expect(2) = 0.60
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 257 HHECPHSHY*HCHHKSNQHLGPLAVLYP 340
           HH  P  HY H H+ ++ H    A +YP
Sbjct: 490 HHIPPSHHYTHTHNHNHNHPNSSAGMYP 517



 Score = 23.5 bits (49), Expect(2) = 0.60
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 330 SSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNR 425
           SS  D    R  +  CCRG  R  ++RH   R
Sbjct: 546 SSVFDSEGGRRYAGGCCRGLDRGLWRRHHRRR 577


>sp|P42975|BIRA_BACSU Bifunctional protein birA OS=Bacillus subtilis
           GN=birA PE=1 SV=1
          Length = 325

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 269 DTRDAFRKAKRNHARRIHDANGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSV 102
           D     R A   H   +     +VE+   R +GY+++KK GK+ ++ ++ G K+ V
Sbjct: 28  DALGCSRTAVWKHIEELRKEGYEVEA--VRRKGYRLIKKPGKLSESEIRFGLKTEV 81


>sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing protein
           1 OS=Mus musculus GN=Ahdc1 PE=1 SV=1
          Length = 1594

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 371 KRGRPPKRVIVGRGRPKAQDV 309
           KRGRPPK +++G G+PK   V
Sbjct: 543 KRGRPPKNLLLGPGKPKEPTV 563


>sp|Q5TGY3|AHDC1_HUMAN A.T hook DNA-binding motif-containing protein
           1 OS=Homo sapiens GN=AHDC1 PE=1 SV=1
          Length = 1603

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 371 KRGRPPKRVIVGRGRPK 321
           KRGRPPK +++G G+PK
Sbjct: 546 KRGRPPKNLLLGPGKPK 562


>sp|P49144|5HT1B_RABIT 5-hydroxytryptamine receptor 1B
           OS=Oryctolagus cuniculus GN=HTR1B PE=2 SV=1
          Length = 390

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +3

Query: 240 LSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRH 398
           L  S  +T + + I+   I+    + G W        LW S+ +TCC     H
Sbjct: 87  LIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDLWLSSDITCCTASIMH 139


>sp|P79250|5HT1B_CANFA 5-hydroxytryptamine receptor 1B OS=Canis
           familiaris GN=HTR1B PE=2 SV=2
          Length = 389

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +3

Query: 240 LSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRH 398
           L  S  +T + + I+   I+    + G W        LW S+ +TCC     H
Sbjct: 86  LIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDLWLSSDITCCTASILH 138


>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium
           discoideum GN=copb PE=2 SV=2
          Length = 912

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -3

Query: 311 VDLICDGSANNVNVDTRDAFRKAKRNHARRIHDANGDV 198
           +DL+C+ S NNV +   D   + K+NH++ + +   D+
Sbjct: 290 IDLLCNESDNNVKMIVLDKLIEIKKNHSKIMEELVMDI 327


>sp|Q5M9Q1|NKAPL_HUMAN NKAP-like protein OS=Homo sapiens GN=NKAPL
           PE=2 SV=2
          Length = 402

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = -3

Query: 275 NVDTRDAFRKAKRNHARRIHDANGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSVHE 96
           N  ++   RK   + +    D N D +    R +  K  KK+ K  KT  KK +K+    
Sbjct: 191 NKSSKRKHRKYSDSDSNSESDTNSDSDDDKKRVKAKK--KKKKKKHKTKKKKNKKTKKES 248

Query: 95  EGDSCDE 75
              SC +
Sbjct: 249 SDSSCKD 255


>sp|Q6XXX8|5HT1B_VULVU 5-hydroxytryptamine receptor 1B OS=Vulpes
           vulpes GN=HTR1B PE=3 SV=1
          Length = 389

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +3

Query: 240 LSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRH 398
           L  S  +T + + I+   I+    + G W        LW S+ +TCC     H
Sbjct: 86  LIASLAVTDLLVSILVMPISTMYAVTGRWTLGQVVCDLWLSSDITCCTASILH 138


>sp|Q6PF18|MORN3_HUMAN MORN repeat-containing protein 3 OS=Homo
           sapiens GN=MORN3 PE=2 SV=1
          Length = 240

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
 Frame = -3

Query: 251 RKAKRNHAR-RIHDANGDV-----ESSHARGRGYKILKKRGKVQKTHVKKGRK 111
           RKA+RN  R +++  NGD      E +   G+G ++ KK+G + +   K G++
Sbjct: 19  RKAQRNGLRSQVYAVNGDYYVGEWEDNVKHGKGTQVWKKKGAIYEGDWKFGKR 71

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917323|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D04.
         (433 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4X7X6|A4X7X6_SALTO Fumarate reductase/succinate dehydrogenas...    35   1.4  
tr|B8BXX7|B8BXX7_THAPS Predicted protein OS=Thalassiosira pseudo...    35   1.4  
tr|Q5W771|Q5W771_ORYSJ Putative polyprotein OS=Oryza sativa subs...    35   1.9  
tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis GN=GI163...    35   1.9  
tr|Q60EC3|Q60EC3_ORYSJ Unknow protein OS=Oryza sativa subsp. jap...    35   2.5  
tr|B4N1L6|B4N1L6_DROWI GK16330 OS=Drosophila willistoni GN=GK163...    35   2.5  
tr|B4JUR0|B4JUR0_DROGR GH15235 OS=Drosophila grimshawi GN=GH1523...    35   2.5  
tr|B3NCY9|B3NCY9_DROER GG15622 OS=Drosophila erecta GN=GG15622 P...    35   2.5  
tr|Q9I5N6|Q9I5N6_PSEAE Putative uncharacterized protein OS=Pseud...    34   3.2  
tr|Q8LM64|Q8LM64_ORYSJ Putative retrotransposable elements TNP2 ...    34   3.2  
tr|Q2R361|Q2R361_ORYSJ Transposon protein, putative, CACTA, En/S...    34   3.2  
tr|Q9VVT4|Q9VVT4_DROME CG14074 OS=Drosophila melanogaster GN=CG1...    34   3.2  
tr|Q2T6Z7|Q2T6Z7_BURTA Lipoprotein, putative OS=Burkholderia tha...    34   4.2  
tr|Q53MQ2|Q53MQ2_ORYSJ Transposon protein, putative, CACTA, En/S...    34   4.2  
tr|Q2QMN1|Q2QMN1_ORYSJ Transposon protein, putative, CACTA, En/S...    34   4.2  
tr|B4IED3|B4IED3_DROSE GM10082 OS=Drosophila sechellia GN=GM1008...    33   5.5  
tr|B7UZ39|B7UZ39_PSEAE Putative uncharacterized protein OS=Pseud...    33   7.1  
tr|A3LLN7|A3LLN7_PSEAE Putative uncharacterized protein OS=Pseud...    33   7.1  
tr|A8M4Y2|A8M4Y2_SALAI Fumarate reductase/succinate dehydrogenas...    33   7.1  
tr|Q8S773|Q8S773_ORYSA Putative uncharacterized protein OSJNBa00...    33   7.1  
tr|Q8S602|Q8S602_ORYSJ Putative uncharacterized protein OSJNBa00...    33   7.1  
tr|Q852J8|Q852J8_ORYSJ Transposon protein, putative, CACTA, En/S...    33   7.1  
tr|Q339W0|Q339W0_ORYSJ Transposon protein, putative, CACTA, En/S...    33   7.1  
tr|Q10C76|Q10C76_ORYSJ Transposon protein, putative, CACTA, En/S...    33   7.1  
tr|B3MNH9|B3MNH9_DROAN GF14213 OS=Drosophila ananassae GN=GF1421...    33   7.1  
tr|B7R6B8|B7R6B8_9THEO Putative uncharacterized protein OS=Carbo...    33   9.3  
tr|Q7Y1K9|Q7Y1K9_ORYSJ Putative uncharacterized protein OSJNBb00...    33   9.3  
tr|Q4KPH4|Q4KPH4_9VIRU ORF 13 OS=Haloarcula phage SH1 PE=4 SV=1        33   9.3  
tr|Q7RPC2|Q7RPC2_PLAYO Putative uncharacterized protein PY01537 ...    33   9.3  
tr|B4LST2|B4LST2_DROVI GJ11100 OS=Drosophila virilis GN=GJ11100 ...    33   9.3  

>tr|A4X7X6|A4X7X6_SALTO Fumarate reductase/succinate dehydrogenase
           flavoprotein domain protein OS=Salinispora tropica
           (strain ATCC BAA-916 / DSM 44818 / CNB-440)
           GN=Strop_2532 PE=3 SV=1
          Length = 551

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 407 LVGVSGA--PPTTCKRGRPPKRVIVGRGRPKAQDVDLICDGSANN 279
           +VGV G+   PTT +RGRP  R +VG  + +AQ V +   G   N
Sbjct: 183 VVGVHGSRLEPTTAERGRPSSRTVVGEFQARAQAVIVTSGGIGGN 227


>tr|B8BXX7|B8BXX7_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_3486 PE=4 SV=1
          Length = 483

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = -3

Query: 326 PKAQDVDLICDGSANNVNVDTRDAFRKAKRNHARRIHDANGDVESSHARGR 174
           P+ +    +CD S + V+VD  D   K   +HARR HD  G V +S   GR
Sbjct: 68  PRREITLKLCDSSHDVVDVDADDVVEKRHVHHARRFHD--GSVAASVCLGR 116


>tr|Q5W771|Q5W771_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
           japonica GN=OJ1320_D10.3 PE=4 SV=1
          Length = 812

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
 Frame = -3

Query: 389 APPTTCKRGRPPKRVIVGRGRPKAQD---------VDLICDGSANNVNVDTRDAFRKAKR 237
           A PTT   GRPPKR       P AQD         +    D   +    D++        
Sbjct: 425 ARPTTAPGGRPPKRPASAPSAPPAQDRHAQSYDVQLQYDTDFGEDRTEADSKAIHEPTPM 484

Query: 236 NHARRIHDA----NGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSVHEE 93
             +R+ H +      D   +  RGRG K+       +K  + KG++ +  +E
Sbjct: 485 KKSRKAHSSPQRITLDKPEAKGRGRGGKVQSSLLAPRKLDLGKGQEETKGKE 536


>tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis GN=GI16343
            PE=4 SV=1
          Length = 3323

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
 Frame = -3

Query: 371  KRGRPPKRVIVGRGRPKAQDVDLICDGSANNVNVDT----RDAFRKAKRNHARRIHDANG 204
            KRGRPPK+       PK++  +     +A  +  DT        RKAKR+   +++D   
Sbjct: 1213 KRGRPPKKATEEHSEPKSRQEEEQEMPAAKRICTDTLPPPARTRRKAKRSELEKLNDDIA 1272

Query: 203  DV----ESSHARGRGYKILKKRGKVQKTHVKKGRKSSVHEEGDSCDEHGS 66
             +    +  HA GR     +     QK  + +   S+V     SC ++ S
Sbjct: 1273 HMYYADDVIHATGR-----RTCTTQQKQSIAESSSSNVSSRRSSCSQNSS 1317


>tr|Q60EC3|Q60EC3_ORYSJ Unknow protein OS=Oryza sativa subsp. japonica
            GN=OSJNBa0044P19.4 PE=4 SV=1
          Length = 1156

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
 Frame = -3

Query: 389  APPTTCKRGRPPKRVIVGRGRPKAQD---------VDLICDGSANNVNVDTRDAFRKAKR 237
            A PTT   GRPPKR       P AQD         +    D   +    D++        
Sbjct: 790  ARPTTAPGGRPPKRPASAPSAPPAQDRHAQSYDVQLQYDTDFGEDRTEADSKAIHEPPPM 849

Query: 236  NHARRIHDA----NGDVESSHARGRGYKILKKRGKVQKTHV 126
              +R+ H +      D   +  RGRG K   K  +V+K +V
Sbjct: 850  KKSRKAHSSPQRITLDKPEAKGRGRGGKEKTKGKEVKKKYV 890


>tr|B4N1L6|B4N1L6_DROWI GK16330 OS=Drosophila willistoni GN=GK16330
           PE=4 SV=1
          Length = 965

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
 Frame = -3

Query: 425 SIATMPLVGVSGAPPTTCKRGRPPKRVIVGRGRPK--AQDVDLICDGSANNVNVDTRDAF 252
           S+AT+ L  V  APP   K  + P   +  RG P    +   L  D +  N +   R + 
Sbjct: 123 SLATLGLQRVGSAPPPKPKGQKAPIPTLNARGMPARIRKKNPLFYDENIINDDKPLRMSL 182

Query: 251 RKAKRNHARRIHDANGDVESSHARGR-GYKILKKRGKVQKTHVKKGRKSSVHEEGDSCDE 75
              K    R  + A G+  +  A G    K+LKKR  V   +++     S      S   
Sbjct: 183 APKKVGPGRPPNSAGGNAAAKAAVGAIPSKVLKKRKGVVSRYMRTSDNGSSSNSASSQQG 242

Query: 74  HGSVG 60
            G+VG
Sbjct: 243 SGAVG 247


>tr|B4JUR0|B4JUR0_DROGR GH15235 OS=Drosophila grimshawi GN=GH15235
           PE=4 SV=1
          Length = 417

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 32/112 (28%), Positives = 48/112 (42%)
 Frame = -3

Query: 398 VSGAPPTTCKRGRPPKRVIVGRGRPKAQDVDLICDGSANNVNVDTRDAFRKAKRNHARRI 219
           V   P    KRGRPPK    GRGRP          G ++N ++D  +            +
Sbjct: 27  VDTIPTIPKKRGRPPK--AKGRGRPPKAPA-----GGSDNDDLDQDE------------L 67

Query: 218 HDANGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSVHEEGDSCDEHGSV 63
            +ANG++ SS         +K RG+ +K  ++    S   ++  S DE  SV
Sbjct: 68  GEANGELPSSQPLK-----IKGRGRPRKAPIQLLANSGSDDDDSSADEKPSV 114


>tr|B3NCY9|B3NCY9_DROER GG15622 OS=Drosophila erecta GN=GG15622 PE=4
            SV=1
          Length = 955

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -3

Query: 275  NVDTRDAF-RKAKRNHARRIHDANGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSVH 99
            N D+ D    K KR  A++  D++     + ++ + +K  KK GK  K H K  RKSS  
Sbjct: 831  NSDSEDEHVPKKKRKKAKKAADSSDSDSEASSKRKKHKKHKKHGKKSKKHKKHKRKSSAG 890

Query: 98   EEGDSCDEHGS 66
            +        GS
Sbjct: 891  KSRADSSSQGS 901


>tr|Q9I5N6|Q9I5N6_PSEAE Putative uncharacterized protein
            OS=Pseudomonas aeruginosa GN=PA0690 PE=4 SV=1
          Length = 4180

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 259  SRVSTFTLLALPSQIKSTSWAFGRPLPTMTRFG-GRPLLHVVGG 387
            SR+   TLLA P+ +++ +W  G PLP++ R G  RP + ++ G
Sbjct: 2878 SRLGAGTLLAAPASVQAMTWPAGVPLPSILREGPSRPNVLLLNG 2921


>tr|Q8LM64|Q8LM64_ORYSJ Putative retrotransposable elements TNP2
           (Transposon protein, putative, CACTA, En/Spm sub-class)
           OS=Oryza sativa subsp. japonica GN=OSJNAb0072F04.19 PE=4
           SV=1
          Length = 1007

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
 Frame = -3

Query: 389 APPTTCKRGRPPKRVIVGRGRPKAQD---------VDLICDGSANNVNVDTRDAFRKAKR 237
           A PTT   GRPPKR       P AQD         +    D   +    D++        
Sbjct: 451 ARPTTAPGGRPPKRPASAPSAPPAQDRHAQSYDLQLQYDTDFGEDRTEADSKAIHEPPPM 510

Query: 236 NHARRIHDA----NGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSVHEE 93
             +R+ H +      D   +  RGRG K+       +K  + KG++ +  +E
Sbjct: 511 KKSRKAHSSPQRITLDKPEAKGRGRGGKVQASLLAPRKLDLGKGQEETKGKE 562