BP917330
Clone id YMU001_000099_D12
Library
Length 194
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAGAGAGCAACCTACGGATACGTAGAAGCTATGGCGAGAACATGGATAAAATCCAACAGA
GTTTCTTCTATAAATTGAGCCTTCGTGCTCTCCGCGGTCACCATAGCTCCGATACCAATT
GAAGGGGATCGGGGAGTACCACAGACGGAGAGTGAGAGAGAGAGAAGGAGACACACACAC
AATGTGGGTGGGGA
■■Homology search results ■■ -
sp_hit_id Q55D99
Definition sp|Q55D99|PAKA_DICDI Serine/threonine-protein kinase pakA OS=Dictyostelium discoideum
Align length 45
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917330|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D12.
(194 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q55D99|PAKA_DICDI Serine/threonine-protein kinase pakA OS=Dic... 30 2.9
sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mu... 30 3.8
sp|A8EX66|GLSA_ARCB4 Glutaminase OS=Arcobacter butzleri (strain ... 30 5.0

>sp|Q55D99|PAKA_DICDI Serine/threonine-protein kinase pakA
OS=Dictyostelium discoideum GN=pakA PE=1 SV=1
Length = 1197

Score = 30.4 bits (67), Expect = 2.9
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3

Query: 36 ENMDKIQQSFFYKLSLRALRGHHSSDTN*RGSGSTTDGE*EREKE 170
E +K ++SFF KL + + HHSS + SGS+ GE + +K+
Sbjct: 767 EEKEKEKKSFFNKLFSKEKKDHHSSSKS-PSSGSSGGGEVDEKKK 810


>sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mus
musculus GN=Snx26 PE=1 SV=1
Length = 1305

Score = 30.0 bits (66), Expect = 3.8
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = -3

Query: 141 WYSPIPFNWYR----SYGDRGEHEGSIYR 67
W SP PF YR SYG GE GS+YR
Sbjct: 1245 WGSPEPFLLYRPAPPSYGRGGEVRGSLYR 1273


>sp|A8EX66|GLSA_ARCB4 Glutaminase OS=Arcobacter butzleri (strain
RM4018) GN=glsA PE=3 SV=1
Length = 305

Score = 29.6 bits (65), Expect = 5.0
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = -1

Query: 140 GTPRSPSIGIGAMVTAESTKAQFIEET---LLDFIHVLA 33
G PR+P I GA+VTA++ + + +T +LDFI +++
Sbjct: 105 GIPRNPFINAGAIVTADTLVSIYKNDTFNQILDFIKMVS 143


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917330|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_D12.
(194 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******