BP917331
Clone id YMU001_000099_E02
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCGGCCTCACCCTCTCCTCAAGGATCGAAACCCTAGTTGTTCAGAGCAGGTCTTGCCAT
CGCTGTGCATTTGTACATATCTCGTCCCGCTTGTCTATTCTTCGACCTCATCATGCCCCA
GCTGAAGCGAGAATCACCATCGCCATGCCTCACGCTCCTGGTGTAGCTCTCATTCATTCC
GCAGAAAATACCGCATCACCGTAGGGAAAATGCAAACATCTTCTCAGCCTTCATCGTCAA
ATGGAAGCAGTCATGCGCATGGTGCTGGTTATCTTCGGAAGGTGGCTCGCTCTTACAGAA
CTCGGCTTGCTAATGGCAAGAATGGAGGCAAGTCAGCATAGAAAATAGTGGCTTCTTCAG
AAGATCCAGGCATCAACAGCGACAACGCGGCTTCAGATGGTAGTAGTGGCATTGCCTCGG
CTTCCATGGAGGCGGAGAACACAGATGCTGAGAGCTCTAAATCTCAATCATCTCTAACAT
CCGATCCGACTGAAATAAGTTTGAAAGTCCAGGTAATGGAAACCTTGATCACCAATGTAT
TTTCGACTATCTCCTCT
■■Homology search results ■■ -
sp_hit_id Q8BVE8
Definition sp|Q8BVE8|NSD2_MOUSE Probable histone-lysine N-methyltransferase NSD2 OS=Mus musculus
Align length 18
Score (bit) 26.9
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917331|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_E02.
(557 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BVE8|NSD2_MOUSE Probable histone-lysine N-methyltransferase... 27 3.7
sp|A5DX93|NPL4_LODEL Nuclear protein localization protein 4 OS=L... 30 6.1
sp|O96028|NSD2_HUMAN Probable histone-lysine N-methyltransferase... 26 7.7

>sp|Q8BVE8|NSD2_MOUSE Probable histone-lysine N-methyltransferase
NSD2 OS=Mus musculus GN=Whsc1 PE=2 SV=2
Length = 1365

Score = 26.9 bits (58), Expect(2) = 3.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2

Query: 257 AWCWLSSEGGSLLQNSAC 310
+WC++ S+GGSLL AC
Sbjct: 832 SWCFVCSKGGSLLCCEAC 849



Score = 22.3 bits (46), Expect(2) = 3.7
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3

Query: 129 ENHHRHASRSWC 164
+ HH H + SWC
Sbjct: 823 KRHHTHVNVSWC 834


>sp|A5DX93|NPL4_LODEL Nuclear protein localization protein 4
OS=Lodderomyces elongisporus GN=NPL4 PE=3 SV=1
Length = 600

Score = 30.4 bits (67), Expect = 6.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3

Query: 363 LLKKPLFSMLTCLHSCH*QAEFCKSEPPSEDNQHHAHDCFHLTMKA 226
+L +P+ SM C H E+C PP ++N H H++ A
Sbjct: 156 ILSRPISSM--CRHGAKGMCEYCSPLPPWDENYRKEHAIKHISYHA 199


>sp|O96028|NSD2_HUMAN Probable histone-lysine N-methyltransferase
NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1
Length = 1365

Score = 25.8 bits (55), Expect(2) = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2

Query: 257 AWCWLSSEGGSLLQNSAC 310
+WC++ S+GGSLL +C
Sbjct: 832 SWCFVCSKGGSLLCCESC 849



Score = 22.3 bits (46), Expect(2) = 7.7
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3

Query: 129 ENHHRHASRSWC 164
+ HH H + SWC
Sbjct: 823 KRHHAHVNVSWC 834


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917331|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_E02.
(557 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******