BP917335
Clone id YMU001_000099_E06
Library
Length 138
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TATGTGACACAGAAACTGTTAGCAGTCATGGTTTTCTCAAGCGCCTTGTGAAATATTTTG
AGGAGCATGGAGATTATCTAAGTGCCTCAGAGTATGTGGCATGAACTGGTGCTTTTGATT
TTCCAATTCCATGCAAAT
■■Homology search results ■■ -
sp_hit_id Q60560
Definition sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetus auratus
Align length 32
Score (bit) 43.9
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917335|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_E06.
(138 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetu... 44 2e-04
sp|P38935|SMBP2_HUMAN DNA-binding protein SMUBP-2 OS=Homo sapien... 44 3e-04
sp|P40694|SMBP2_MOUSE DNA-binding protein SMUBP-2 OS=Mus musculu... 42 7e-04

>sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetus
auratus GN=IGHMBP2 PE=2 SV=1
Length = 989

Score = 43.9 bits (102), Expect = 2e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEYV 98
CD+ TV++H FLK LV YF EHG+ +A EY+
Sbjct: 611 CDSRTVNNHAFLKTLVDYFTEHGEVRTAFEYL 642


>sp|P38935|SMBP2_HUMAN DNA-binding protein SMUBP-2 OS=Homo sapiens
GN=IGHMBP2 PE=1 SV=1
Length = 993

Score = 43.5 bits (101), Expect = 3e-04
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEYV 98
CD+ TV++H FLK LV+YF +HG+ +A EY+
Sbjct: 612 CDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYL 643


>sp|P40694|SMBP2_MOUSE DNA-binding protein SMUBP-2 OS=Mus musculus
GN=Ighmbp2 PE=1 SV=1
Length = 993

Score = 42.4 bits (98), Expect = 7e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEYV 98
CD+ TV++H FL+ LV YF EHG+ +A EY+
Sbjct: 611 CDSHTVNNHAFLETLVDYFTEHGEVRTAFEYL 642


tr_hit_id Q9FNX9
Definition tr|Q9FNX9|Q9FNX9_ARATH Putative helicase OS=Arabidopsis thaliana
Align length 31
Score (bit) 58.9
E-value 1.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917335|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_E06.
(138 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FNX9|Q9FNX9_ARATH Putative helicase OS=Arabidopsis thaliana... 59 1e-07
tr|O81047|O81047_ARATH Putative helicase OS=Arabidopsis thaliana... 59 1e-07
tr|A7PWB9|A7PWB9_VITVI Chromosome chr8 scaffold_34, whole genome... 55 2e-06
tr|A5B051|A5B051_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|B8A3I3|B8A3I3_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06
tr|Q6F2U8|Q6F2U8_ORYSJ Os03g0586900 protein OS=Oryza sativa subs... 54 5e-06
tr|B8AL83|B8AL83_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06
tr|A3AJZ7|A3AJZ7_ORYSJ Putative uncharacterized protein OS=Oryza... 54 5e-06
tr|A8II74|A8II74_CHLRE Predicted protein OS=Chlamydomonas reinha... 49 9e-05
tr|Q9EQN5|Q9EQN5_RAT Antifreeze-enhancer binding protein AEP OS=... 44 0.004
tr|A0PJD2|A0PJD2_HUMAN IGHMBP2 protein (Fragment) OS=Homo sapien... 44 0.005
tr|Q75JA0|Q75JA0_DICDI Similar to Rattus norvegicus (Rat). Antif... 41 0.026
tr|A0CKK8|A0CKK8_PARTE Chromosome undetermined scaffold_2, whole... 40 0.044
tr|Q4RS70|Q4RS70_TETNG Chromosome 13 SCAF15000, whole genome sho... 40 0.075
tr|A4RZM4|A4RZM4_OSTLU Predicted protein (Fragment) OS=Ostreococ... 39 0.098
tr|B7Q747|B7Q747_IXOSC DNA-binding protein Smubp-2, putative OS=... 39 0.13
tr|B8BQC9|B8BQC9_THAPS Putative uncharacterized protein (Fragmen... 39 0.17
tr|Q015W7|Q015W7_OSTTA Putative DNA helicase (ISS) OS=Ostreococc... 38 0.22
tr|B6MTW7|B6MTW7_BRAFL Putative uncharacterized protein OS=Branc... 38 0.22
tr|B6MTW6|B6MTW6_BRAFL Putative uncharacterized protein OS=Branc... 38 0.22
tr|Q5ZHN2|Q5ZHN2_CHICK Putative uncharacterized protein OS=Gallu... 37 0.37
tr|Q1RLC0|Q1RLC0_CIOIN Zinc finger protein OS=Ciona intestinalis... 35 1.8
tr|B7G700|B7G700_PHATR Predicted protein (Fragment) OS=Phaeodact... 33 7.0

>tr|Q9FNX9|Q9FNX9_ARATH Putative helicase OS=Arabidopsis thaliana
GN=atpc-2 gene PE=2 SV=1
Length = 635

Score = 58.9 bits (141), Expect = 1e-07
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CDTETVSS FLKR+++YFEEHG+YLSASEY
Sbjct: 603 CDTETVSSDAFLKRMIEYFEEHGEYLSASEY 633


>tr|O81047|O81047_ARATH Putative helicase OS=Arabidopsis thaliana
GN=At2g03270 PE=2 SV=2
Length = 639

Score = 58.9 bits (141), Expect = 1e-07
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CDTETVSS FLKR+++YFEEHG+YLSASEY
Sbjct: 607 CDTETVSSDAFLKRMIEYFEEHGEYLSASEY 637


>tr|A7PWB9|A7PWB9_VITVI Chromosome chr8 scaffold_34, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025552001
PE=4 SV=1
Length = 647

Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CDTETV+S FLKRL++YFEE+G+YLSASEY
Sbjct: 614 CDTETVTSDKFLKRLIEYFEENGEYLSASEY 644


>tr|A5B051|A5B051_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_016912 PE=4 SV=1
Length = 649

Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CDTETV+S FLKRL++YFEE+G+YLSASEY
Sbjct: 616 CDTETVTSDKFLKRLIEYFEENGEYLSASEY 646


>tr|B8A3I3|B8A3I3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 274

Score = 54.7 bits (130), Expect = 2e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CD ETVSS FLKRLV+YFEE+G+YLSASEY
Sbjct: 241 CDVETVSSDRFLKRLVEYFEENGEYLSASEY 271


>tr|Q6F2U8|Q6F2U8_ORYSJ Os03g0586900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0010D22.27 PE=2 SV=1
Length = 651

Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CD ETVS+ FLKRLV+YFEE+G+YLSASEY
Sbjct: 619 CDVETVSNDKFLKRLVEYFEENGEYLSASEY 649


>tr|B8AL83|B8AL83_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12407 PE=4 SV=1
Length = 651

Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CD ETVS+ FLKRLV+YFEE+G+YLSASEY
Sbjct: 619 CDVETVSNDKFLKRLVEYFEENGEYLSASEY 649


>tr|A3AJZ7|A3AJZ7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_011119 PE=4 SV=1
Length = 628

Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEY 95
CD ETVS+ FLKRLV+YFEE+G+YLSASEY
Sbjct: 596 CDVETVSNDKFLKRLVEYFEENGEYLSASEY 626


>tr|A8II74|A8II74_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_127992 PE=4 SV=1
Length = 640

Score = 49.3 bits (116), Expect = 9e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASE 92
CD+ETVS GFLKRLV+YF HG+Y SA+E
Sbjct: 606 CDSETVSQDGFLKRLVEYFSTHGEYTSAAE 635


>tr|Q9EQN5|Q9EQN5_RAT Antifreeze-enhancer binding protein AEP
OS=Rattus norvegicus GN=Ighmbp2 PE=2 SV=1
Length = 988

Score = 43.9 bits (102), Expect = 0.004
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3

Query: 3 CDTETVSSHGFLKRLVKYFEEHGDYLSASEYV 98
CD+ TV++H FLK LV YF EHG+ +A EY+
Sbjct: 611 CDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYL 642