BP917337
Clone id YMU001_000099_E09
Library
Length 286
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGGGGAAGCGAGCGTGGAGCTTGTAGGATGGACTCTCTCTCTATCTTGACTGTCTCTTGT
CCTCTCAATCCATAAGAAGCAAGGCATCATAGGCAAGCCTCTTTCAAGGACGGAGGAGAA
AGTCATGGTGAATGGTTGGTGCAATGATTATACCTCTCTTATAATCACGCTATTGTGTCG
TCATGGGGGAACCATAACATGAAGTTAAGAATGAAGAAAAACATACGTTACTTCCATGTA
CATCCACAAAATCCCTTAACAGACATCGTTCAACACATACATAGGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917337|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_E09.
(286 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B6NVK4
Definition tr|B6NVK4|B6NVK4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 61
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917337|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_E09.
(286 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6NVK4|B6NVK4_BRAFL Putative uncharacterized protein OS=Branc... 34 4.2
tr|A9T806|A9T806_PHYPA Predicted protein OS=Physcomitrella paten... 33 5.5

>tr|B6NVK4|B6NVK4_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_237370 PE=4 SV=1
Length = 198

Score = 33.9 bits (76), Expect = 4.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1

Query: 22 CRMDSLSILTVSCPLNP*EARHHRQASFKDGGESHGEWLVQ*LYLSYNHAIVSSWGNHNM 201
C MDS+ ++ V N + HR+ S ++GGE +W V H S+ NHN+
Sbjct: 109 CNMDSIPVMLVG---NKCDEVQHREISMQEGGELAKKWTVA-------HMETSAKTNHNV 158

Query: 202 K 204
K
Sbjct: 159 K 159


>tr|A9T806|A9T806_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_168559 PE=4 SV=1
Length = 902

Score = 33.5 bits (75), Expect = 5.5
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2

Query: 107 RTEEKVMVNGWCNDYTSLIITLLCRHGGTIT*S*E*RKTYVTSMYIH 247
RTE + +CN+Y +++TL C GT+ S E +TYV + +H
Sbjct: 404 RTEGQAQFFSFCNNYEDIMLTLRCGIQGTVA-SNEEHETYVDAYVLH 449