BP917343
Clone id YMU001_000099_F04
Library
Length 409
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACACACTTACATAGGATCTCAGGTGGTATGGATGAATGGATCAAATGAATACCTTTTAA
TGCAATAAGTAGTTATCCTATATGTGATACATGAATCTCACCTATTGAGTATTTTTTGGG
TTGCTCATGCACGTTGCTATATCGACTTAGCAAATCCTTTACTGGCAGGGCAATTGACAT
CATTTATCCCACTCACTTGCATGCTCAACATGATGACTCGCTACTTCTCTTGTTCTTGGA
TATGAATGTCCACATGATTTGCTTGATTCTCATGAGCCCTTATACTAGGTATCTCATAAA
CCACCCACCATGGAAAGGCTACTAACTTTTCTATGGTTGGTGAAAGGCTACCTACTAATT
CTTTACTACTATTTCAATGACCCATCTTGTCACATGATCATTCATCCAA
■■Homology search results ■■ -
sp_hit_id Q5XF03
Definition sp|Q5XF03|GPAT8_ARATH Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana
Align length 33
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917343|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_F04.
(409 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5XF03|GPAT8_ARATH Probable glycerol-3-phosphate acyltransfer... 29 6.5
sp|O32147|XDHA_BACSU Probable xanthine dehydrogenase subunit A O... 29 8.5
sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil... 29 8.5
sp|Q8NXC4|LTAA_STAAW Probable glycolipid permease ltaA OS=Staphy... 29 8.5
sp|Q6GAR1|LTAA_STAAS Probable glycolipid permease ltaA OS=Staphy... 29 8.5
sp|Q6GI68|LTAA_STAAR Probable glycolipid permease ltaA OS=Staphy... 29 8.5
sp|Q7A6D3|LTAA_STAAN Probable glycolipid permease ltaA OS=Staphy... 29 8.5
sp|Q99V76|LTAA_STAAM Probable glycolipid permease ltaA OS=Staphy... 29 8.5
sp|Q2YWW7|LTAA_STAAB Probable glycolipid permease ltaA OS=Staphy... 29 8.5

>sp|Q5XF03|GPAT8_ARATH Probable glycerol-3-phosphate acyltransferase
8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1
Length = 500

Score = 29.3 bits (64), Expect = 6.5
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1

Query: 289 VSHKPPTMERLLTFLWLVKGYLL-ILYYYFNDP 384
++ +P + ++T+LWL G++L I+ YFN P
Sbjct: 238 LAQRPTPLNAIITYLWLPFGFILSIIRVYFNLP 270


>sp|O32147|XDHA_BACSU Probable xanthine dehydrogenase subunit A
OS=Bacillus subtilis GN=pucA PE=2 SV=1
Length = 330

Score = 28.9 bits (63), Expect = 8.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2

Query: 182 IYPTHLHAQHDDSLLLLFLDMNVHMICLILMSPYTRYLIN--HPP 310
+ TH H QHD +++ N+H I L+ + T+ L++ HPP
Sbjct: 250 VVATH-HYQHDQTIINFLFSQNLHYIGLLGSANRTKRLLSGKHPP 293


>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil
GN=INRPK1 PE=2 SV=2
Length = 1109

Score = 28.9 bits (63), Expect = 8.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1

Query: 334 WLVKGYLLILYYYFNDPSCHMIIH 405
WL K Y LILY Y + S H I+H
Sbjct: 880 WLRKEYGLILYTYMENGSLHDILH 903


>sp|Q8NXC4|LTAA_STAAW Probable glycolipid permease ltaA
OS=Staphylococcus aureus (strain MW2) GN=ltaA PE=3 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2

Query: 95 ISPIEYF-------LGCSCTLLYRLSKSFTGRAIDIIYPTHLHAQHDDSLLLLFLDM--N 247
+S IEY +GC+ ++L+ LSK R+ + +Y L +L+ L M N
Sbjct: 241 VSTIEYTVAIIIGGIGCAVSMLF-LSKLIDNRSRNFMYGVILSGFILYMILIFTLSMIVN 299

Query: 248 VHMICLILMSPYTRYLINHPPWKGY 322
+H++ +I ++ Y I P W +
Sbjct: 300 IHIVWIIALAIGLMYGILLPAWNTF 324


>sp|Q6GAR1|LTAA_STAAS Probable glycolipid permease ltaA
OS=Staphylococcus aureus (strain MSSA476) GN=ltaA PE=3
SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2

Query: 95 ISPIEYF-------LGCSCTLLYRLSKSFTGRAIDIIYPTHLHAQHDDSLLLLFLDM--N 247
+S IEY +GC+ ++L+ LSK R+ + +Y L +L+ L M N
Sbjct: 241 VSTIEYTVAIIIGGIGCAVSMLF-LSKLIDNRSRNFMYGVILSGFILYMILIFTLSMIVN 299

Query: 248 VHMICLILMSPYTRYLINHPPWKGY 322
+H++ +I ++ Y I P W +
Sbjct: 300 IHIVWIIALAIGLMYGILLPAWNTF 324


>sp|Q6GI68|LTAA_STAAR Probable glycolipid permease ltaA
OS=Staphylococcus aureus (strain MRSA252) GN=ltaA PE=3
SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2

Query: 95 ISPIEYF-------LGCSCTLLYRLSKSFTGRAIDIIYPTHLHAQHDDSLLLLFLDM--N 247
+S IEY +GC+ ++L+ LSK R+ + +Y L +L+ L M N
Sbjct: 241 VSTIEYTVAIIIGGIGCAVSMLF-LSKLIDNRSRNFMYGVILSGFILYMILIFTLSMIVN 299

Query: 248 VHMICLILMSPYTRYLINHPPWKGY 322
+H++ +I ++ Y I P W +
Sbjct: 300 IHIVWIIALAIGLMYGILLPAWNTF 324


>sp|Q7A6D3|LTAA_STAAN Probable glycolipid permease ltaA
OS=Staphylococcus aureus (strain N315) GN=ltaA PE=3 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2

Query: 95 ISPIEYF-------LGCSCTLLYRLSKSFTGRAIDIIYPTHLHAQHDDSLLLLFLDM--N 247
+S IEY +GC+ ++L+ LSK R+ + +Y L +L+ L M N
Sbjct: 241 VSTIEYTVAIIIGGIGCAVSMLF-LSKLIDNRSRNFMYGVILSGFILYMILIFTLSMIVN 299

Query: 248 VHMICLILMSPYTRYLINHPPWKGY 322
+H++ +I ++ Y I P W +
Sbjct: 300 IHIVWIIALAIGLMYGILLPAWNTF 324


>sp|Q99V76|LTAA_STAAM Probable glycolipid permease ltaA
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=ltaA PE=3 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2

Query: 95 ISPIEYF-------LGCSCTLLYRLSKSFTGRAIDIIYPTHLHAQHDDSLLLLFLDM--N 247
+S IEY +GC+ ++L+ LSK R+ + +Y L +L+ L M N
Sbjct: 241 VSTIEYTVAIIIGGIGCAVSMLF-LSKLIDNRSRNFMYGVILSGFILYMILIFTLSMIVN 299

Query: 248 VHMICLILMSPYTRYLINHPPWKGY 322
+H++ +I ++ Y I P W +
Sbjct: 300 IHIVWIIALAIGLMYGILLPAWNTF 324


>sp|Q2YWW7|LTAA_STAAB Probable glycolipid permease ltaA
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=ltaA PE=3 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2

Query: 95 ISPIEYF-------LGCSCTLLYRLSKSFTGRAIDIIYPTHLHAQHDDSLLLLFLDM--N 247
+S IEY +GC+ ++L+ LSK R+ + +Y L +L+ L M N
Sbjct: 241 VSTIEYTVAIIIGGIGCAVSMLF-LSKLIDNRSRNFMYGVILSGFILYMILIFTLSMIVN 299

Query: 248 VHMICLILMSPYTRYLINHPPWKGY 322
+H++ +I ++ Y I P W +
Sbjct: 300 IHIVWIIALAIGLMYGILLPAWNTF 324


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917343|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_F04.
(409 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******