BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917348|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_F12.
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CSB4|PAR3L_MOUSE Partitioning defective 3 homolog B OS=Mus ...    32   2.0  
sp|Q8N5T2|TBC19_HUMAN TBC1 domain family member 19 OS=Homo sapie...    31   3.5  
sp|Q2HZ33|LYS4_CANPA Homoaconitase, mitochondrial OS=Candida par...    31   4.6  
sp|P18546|COA1_PAVPN Coat protein VP1 OS=Porcine parvovirus (str...    30   7.8  
sp|P52501|COA1_PAVPK Coat protein VP1 OS=Porcine parvovirus (str...    30   7.8  
sp|P33484|COA1_PAVP9 Coat protein VP1 OS=Porcine parvovirus (str...    30   7.8  

>sp|Q9CSB4|PAR3L_MOUSE Partitioning defective 3 homolog B OS=Mus
            musculus GN=Pard3b PE=1 SV=2
          Length = 1203

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +3

Query: 354  RSGRVLEPEHIEG--ASVHTDTHYPSTI-SSRPSAGTQGSTTQDPKIXXXXXXXXXEIME 524
            R GR L P+H+EG  A V+   H P+   S RP AGT   T +  K+         E   
Sbjct: 984  RDGRPLSPDHLEGLYAKVNKPYHPPALADSGRPMAGT---TDRIQKLRKEYYQARREGFL 1040

Query: 525  AYPNQNT 545
             Y ++NT
Sbjct: 1041 LYEDENT 1047


>sp|Q8N5T2|TBC19_HUMAN TBC1 domain family member 19 OS=Homo sapiens
           GN=TBC1D19 PE=1 SV=1
          Length = 526

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 442 PQRGHKVAPPKTLK*PLVIPPPTQKSWKHTLTKTL 546
           P   H  APP+ LK PLV     Q SW+  + K+L
Sbjct: 75  PLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSL 109


>sp|Q2HZ33|LYS4_CANPA Homoaconitase, mitochondrial OS=Candida
           parapsilosis GN=LYS4 PE=3 SV=1
          Length = 688

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +3

Query: 360 GRVLEPEHIEGASVHTDTHYPSTISSRPSAGTQGSTTQDPKIXXXXXXXXXEIMEAYP 533
           G++  PE I+G  V+       +I    S+G  G+T+++P           E++  +P
Sbjct: 446 GKIGAPEEIDGKPVNASPEIVKSIDLPKSSGNTGATSEEPISEDDTSEASVEVLPGFP 503


>sp|P18546|COA1_PAVPN Coat protein VP1 OS=Porcine parvovirus (strain
           NADL-2) PE=1 SV=1
          Length = 729

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 225 RPIPRHALKNLAKKQTKNTLKTS 293
           RP PRH   NLAKK+ K T  T+
Sbjct: 125 RPAPRHIFINLAKKKAKGTSNTN 147


>sp|P52501|COA1_PAVPK Coat protein VP1 OS=Porcine parvovirus (strain
           Kresse) PE=3 SV=1
          Length = 729

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 225 RPIPRHALKNLAKKQTKNTLKTS 293
           RP PRH   NLAKK+ K T  T+
Sbjct: 125 RPAPRHIFINLAKKKAKGTSNTN 147


>sp|P33484|COA1_PAVP9 Coat protein VP1 OS=Porcine parvovirus (strain
           90HS) PE=3 SV=1
          Length = 729

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 225 RPIPRHALKNLAKKQTKNTLKTS 293
           RP PRH   NLAKK+ K T  T+
Sbjct: 125 RPAPRHIFINLAKKKAKGTSNTN 147

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917348|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_F12.
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q69SV9|Q69SV9_ORYSJ Putative uncharacterized protein P0019A05...    35   3.5  
tr|Q1QE12|Q1QE12_PSYCK OmpA/MotB OS=Psychrobacter cryohalolentis...    33   10.0 

>tr|Q69SV9|Q69SV9_ORYSJ Putative uncharacterized protein P0019A05.25
           OS=Oryza sativa subsp. japonica GN=P0019A05.25 PE=4 SV=1
          Length = 130

 Score = 34.7 bits (78), Expect = 3.5
 Identities = 23/69 (33%), Positives = 30/69 (43%)
 Frame = +1

Query: 301 PPRAAFLTP*GIKSTCTYALGGC*NPSILRVPLFIRTPITHPR*ALDPQRGHKVAPPKTL 480
           PP +A   P  I   C  A+ G     ++  P  I TP       L P+R  +V PP+T 
Sbjct: 52  PPGSAHHRPCVIARICRSAIAGS-TTRVILFPHHITTPRAASEPHLPPRRYGRVPPPRTA 110

Query: 481 K*PLVIPPP 507
             P   PPP
Sbjct: 111 AEPPPFPPP 119


>tr|Q1QE12|Q1QE12_PSYCK OmpA/MotB OS=Psychrobacter cryohalolentis
           (strain K5) GN=Pcryo_0307 PE=3 SV=1
          Length = 533

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 25/97 (25%), Positives = 40/97 (41%)
 Frame = +3

Query: 153 RVTKRRAVKHGTTL*PIRSF*AITRPIPRHALKNLAKKQTKNTLKTSHKAS*SSFFDTLG 332
           ++ +  A KH   +   R   A+  P+  H +K+LA           +  S         
Sbjct: 73  QIARELAGKHNVDVTAARGLIAMAAPLAYHEIKSLAGTTPVPQFLNENIDS--------- 123

Query: 333 YQKHMHLRSGRVLEPEHIEGASVHTDTHYPSTISSRP 443
           YQ+H+ + +  VL    I  A V T TH   T+S+ P
Sbjct: 124 YQRHIPVWATAVLPVGVIAAAPVSTGTHISDTVSTAP 160