BP917350 [AcEST]

BP917350
Clone id	YMU001_000099_G02
Library	YMU01
Length	570
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000099_G02.
Accession	BP917350
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	CTCTGGAGTATGGTGCCTTTCAAAAATACTCAGCTGTAAGACCATTATTTATAACTGGGA AGCTCTCTTCTCGATGATGGCACCGCGTCAAGGTGCAAGAATAGTGGTGGCCTTTTGGCA TACTTGATTTCTGAGCTCTTAATGAATTGATGGCATAATTCTTCAGGTTATATGCATAGC TAGTGCAGTTGTAAACTGTGGAGCATTGAACGTCATCCAACGAAAAAAATCCAGGCCTTA ACGTTGTGCTCAGTTTTTTGGCATTGTTTACATATTTTTTGACCAGCAGCTTGAGTGTTT ATCAATAGTGGTGTCTTCTGAGTTGACAATGATGACTGCCGAAGAAATGAGGAGAAGGCT TAGAACTTGATCGCACACGTCTGAGCGGGGGCTTCACAAGTAGGAAGATTAGTTTAACCC ATGTAAGACGAGTCCACAAGCACGAGCTGGTAGAAGTCGTGTGTTGCTTGGACCTTCGTT ATCTTGTCATGGAATGAATGTAAAATATTCTTTTGCCATCATGCTTTTTTAACCTCTAAA AAAAAAAAAAATTCGCGGCCGCGAATTGAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q8MA11
Definition	sp\|Q8MA11\|RPOC1_CHAGL DNA-directed RNA polymerase subunit beta' OS=Chaetosphaeridium globosum
Align length	30
Score (bit)	30.0
E-value	7.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917350\|Adiantum capillus-veneris mRNA, clone: YMU001_000099_G02. (537 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q8MA11\|RPOC1_CHAGL DNA-directed RNA polymerase subunit beta' ... 30 7.4 >sp\|Q8MA11\|RPOC1_CHAGL DNA-directed RNA polymerase subunit beta' OS=Chaetosphaeridium globosum GN=rpoC1 PE=3 SV=1 Length = 661 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 446 AGRSRVLLGPSLSCHGMNVKYSFAIMLF*P 535 +GRS +++GPSLS H + AI LF P Sbjct: 379 SGRSVIVVGPSLSLHQCGIPKDMAIELFQP 408
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917350\|Adiantum capillus-veneris mRNA, clone: YMU001_000099_G02. (537 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****