BP917351
Clone id YMU001_000099_G03
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGGAAACAAGGGGTTTGGAGATTTTGGAAAGAGGACGGACTTGGTATTGTTCCCAAGAG
ACCGAGGAGGTGCACTTTTAGGCATAGGAGTGCCAATTGGAATTGGAGAAGGAGGCATCT
GTGGTATAGGAGGGGTATGGGGCAGAGGCAAAGGTTTCCAAACATCTGCTTCCTCCCATT
CAATCCGTGGAACACTTGAGATAAGAGGATCTGATGTGATGGGTCTAGATGGTAGTGTGA
GCATGGGAGGAGATGCATCTCCCTGCTGTGGACTAATCATGGAAGATTCATCAAAATAGA
CAGAGTGAGCAAACTGAAATTTTTTCAGCTGAGGGTCATACAACCTGTAAGCTTTCACTC
CAAGGCGATCATCATAGCCCACGAACACCATCCTTGTGCTGGTTGGGTCGAGTTTGTGGC
GCAAGGAAAGGGCCTTGACAGGGTAGGCTGAACACCCGAAGACTTGG
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 87
Score (bit) 43.5
E-value 0.0005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917351|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_G03.
(467 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 44 5e-04
sp|Q6FPB2|GPI7_CANGA GPI ethanolamine phosphate transferase 2 OS... 37 0.033
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G... 36 0.073
sp|P19156|ATP4A_PIG Potassium-transporting ATPase alpha chain 1 ... 31 2.3
sp|P50996|ATP4A_CANFA Potassium-transporting ATPase alpha chain ... 31 2.3
sp|P09626|ATP4A_RAT Potassium-transporting ATPase alpha chain 1 ... 30 4.0
sp|P27112|ATP4A_RABIT Potassium-transporting ATPase alpha chain ... 30 4.0
sp|Q64436|ATP4A_MOUSE Potassium-transporting ATPase alpha chain ... 30 4.0
sp|P20648|ATP4A_HUMAN Potassium-transporting ATPase alpha chain ... 30 4.0
sp|Q9U720|DCSA_DICDI Cellulose synthase catalytic subunit A [UDP... 30 5.2
sp|Q9DUC9|CAPSD_TTVV8 Capsid protein OS=Torque teno virus (isola... 30 5.2
sp|Q555U5|Y4821_DICDI Probable inactive serine/threonine-protein... 29 8.9
sp|O14029|SEC16_SCHPO COPII coat assembly protein sec16 OS=Schiz... 29 8.9
sp|O70601|LAT_RAT Linker for activation of T-cells family member... 29 8.9
sp|B2UL12|GLAA_AKKM8 Alpha-1,3-galactosidase A OS=Akkermansia mu... 29 8.9

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328

Score = 43.5 bits (101), Expect = 5e-04
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGY-DDRLGVKAYRLYDPQLKKFQFAHSVYFD 290
+VFGC A+ R KLD S +F+GY D+ G YRL+DP KK + V F
Sbjct: 649 KVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFG---YRLWDPVKKKVIRSRDVVFR 705

Query: 289 ES------SMISPQQGDASPPMLTLPS 227
ES M + P +T+PS
Sbjct: 706 ESEVRTAADMSEKVKNGIIPNFVTIPS 732


>sp|Q6FPB2|GPI7_CANGA GPI ethanolamine phosphate transferase 2
OS=Candida glabrata GN=LAS21 PE=3 SV=1
Length = 842

Score = 37.4 bits (85), Expect = 0.033
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = -2

Query: 463 VFGCSAYPVK-------ALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAH 305
+FGC +P K AL H DP ++V V D +++ L+D + KF F H
Sbjct: 15 IFGCGFFPQKKVLDGHAALDGTHARDPVFDKLVVVVVD---AMRSDFLFDASISKFHFIH 71

Query: 304 SVYFDESSMISPQQGDASPPMLTLP 230
D S+ ++PP +TLP
Sbjct: 72 EKLADGSAW--GFTAHSNPPTVTLP 94


>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster
GN=GIP PE=1 SV=3
Length = 1409

Score = 36.2 bits (82), Expect = 0.073
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFG + Y V + + K D S + +FVGY+ ++L+D +KF A V DE
Sbjct: 651 RVFGATVY-VHIKNKQGKFDDKSFKSIFVGYEPN----GFKLWDAVNEKFIVARDVVVDE 705

Query: 286 SSMIS 272
++M++
Sbjct: 706 TNMVN 710


>sp|P19156|ATP4A_PIG Potassium-transporting ATPase alpha chain 1
OS=Sus scrofa GN=ATP4A PE=1 SV=3
Length = 1034

Score = 31.2 bits (69), Expect = 2.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2

Query: 62 PRRCTFRHRSANWNWRRRHLWYRRGMGQRQRFPNICFLPFNPWN 193
P+R S + L MG R+RFP +C +PFN N
Sbjct: 453 PKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTN 496


>sp|P50996|ATP4A_CANFA Potassium-transporting ATPase alpha chain 1
OS=Canis familiaris GN=ATP4A PE=2 SV=3
Length = 1034

Score = 31.2 bits (69), Expect = 2.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2

Query: 62 PRRCTFRHRSANWNWRRRHLWYRRGMGQRQRFPNICFLPFNPWN 193
P+R S + L MG R+RFP +C +PFN N
Sbjct: 453 PKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTN 496


>sp|P09626|ATP4A_RAT Potassium-transporting ATPase alpha chain 1
OS=Rattus norvegicus GN=Atp4a PE=2 SV=3
Length = 1033

Score = 30.4 bits (67), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2

Query: 62 PRRCTFRHRSANWNWRRRHLWYRRGMGQRQRFPNICFLPFNPWN 193
P+R S + L MG R RFP +C +PFN N
Sbjct: 452 PKRIVIGDASETALLKFSELTLGNAMGYRDRFPKVCEIPFNSTN 495


>sp|P27112|ATP4A_RABIT Potassium-transporting ATPase alpha chain 1
OS=Oryctolagus cuniculus GN=ATP4A PE=2 SV=3
Length = 1035

Score = 30.4 bits (67), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2

Query: 62 PRRCTFRHRSANWNWRRRHLWYRRGMGQRQRFPNICFLPFNPWN 193
P+R S + L MG R RFP +C +PFN N
Sbjct: 454 PKRIVIGDASETALLKFSELTLGNAMGYRDRFPKVCEIPFNSTN 497


>sp|Q64436|ATP4A_MOUSE Potassium-transporting ATPase alpha chain 1
OS=Mus musculus GN=Atp4a PE=1 SV=3
Length = 1033

Score = 30.4 bits (67), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2

Query: 62 PRRCTFRHRSANWNWRRRHLWYRRGMGQRQRFPNICFLPFNPWN 193
P+R S + L MG R RFP +C +PFN N
Sbjct: 452 PKRIVIGDASETALLKFSELTLGNAMGYRDRFPKVCEIPFNSTN 495


>sp|P20648|ATP4A_HUMAN Potassium-transporting ATPase alpha chain 1
OS=Homo sapiens GN=ATP4A PE=2 SV=5
Length = 1035

Score = 30.4 bits (67), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2

Query: 62 PRRCTFRHRSANWNWRRRHLWYRRGMGQRQRFPNICFLPFNPWN 193
P+R S + L MG R RFP +C +PFN N
Sbjct: 454 PKRIVIGDASETALLKFSELTLGNAMGYRDRFPKVCEIPFNSTN 497


>sp|Q9U720|DCSA_DICDI Cellulose synthase catalytic subunit A
[UDP-forming] OS=Dictyostelium discoideum GN=dcsA PE=1
SV=1
Length = 1059

Score = 30.0 bits (66), Expect = 5.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2

Query: 26 WKEDGLGIVPKRPRRCTFRHRSANWNWRR 112
W+E IV R RH+ A WNW+R
Sbjct: 883 WREGSASIVKLLKARKISRHKLAMWNWKR 911


tr_hit_id Q60DG5
Definition tr|Q60DG5|Q60DG5_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica
Align length 63
Score (bit) 58.5
E-value 2.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917351|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_G03.
(467 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q60DG5|Q60DG5_ORYSJ Putative polyprotein OS=Oryza sativa subs... 59 2e-07
tr|Q25AF6|Q25AF6_ORYSA H0512B01.8 protein OS=Oryza sativa GN=H05... 57 6e-07
tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 56 8e-07
tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 56 8e-07
tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 56 8e-07
tr|Q2RBR6|Q2RBR6_ORYSJ Os11g0101300 protein OS=Oryza sativa subs... 56 1e-06
tr|Q0D5X2|Q0D5X2_ORYSJ Os07g0528100 protein (Fragment) OS=Oryza ... 56 1e-06
tr|B7EQQ7|B7EQQ7_ORYSJ cDNA clone:J023111N02, full insert sequen... 56 1e-06
tr|A8NGH6|A8NGH6_COPC7 Putative uncharacterized protein OS=Copri... 56 1e-06
tr|Q2QYZ3|Q2QYZ3_ORYSJ Retrotransposon protein, putative, Ty1-co... 55 1e-06
tr|Q01LI0|Q01LI0_ORYSA OSIGBa0134J07.9 protein OS=Oryza sativa G... 55 1e-06
tr|Q2QXM6|Q2QXM6_ORYSJ Retrotransposon protein, putative, unclas... 55 2e-06
tr|Q25AG1|Q25AG1_ORYSA H0512B01.3 protein OS=Oryza sativa GN=H05... 55 2e-06
tr|B8YLY6|B8YLY6_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 55 2e-06
tr|Q8W3A4|Q8W3A4_ORYSA Putative gag-pol polyprotein OS=Oryza sat... 55 2e-06
tr|Q10KL1|Q10KL1_ORYSJ Retrotransposon protein, putative, unclas... 55 2e-06
tr|Q7Y141|Q7Y141_ORYSJ Putative polyprotein (Retrotransposon pro... 54 3e-06
tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein OS=Lotus japonicus PE... 54 3e-06
tr|A8PHF5|A8PHF5_COPC7 Putative uncharacterized protein OS=Copri... 54 3e-06
tr|A8P2V5|A8P2V5_COPC7 Putative uncharacterized protein OS=Copri... 54 3e-06
tr|Q8L4X0|Q8L4X0_ORYSJ Os10g0130700 protein OS=Oryza sativa subs... 54 5e-06
tr|Q7XME6|Q7XME6_ORYSJ OSJNBa0061G20.13 protein OS=Oryza sativa ... 54 5e-06
tr|Q01KU7|Q01KU7_ORYSA OSIGBa0115A19.5 protein OS=Oryza sativa G... 54 5e-06
tr|Q01KM9|Q01KM9_ORYSA OSIGBa0097A15.7 protein OS=Oryza sativa G... 54 5e-06
tr|Q7XTU6|Q7XTU6_ORYSA OSJNBb0034I13.10 protein OS=Oryza sativa ... 53 7e-06
tr|Q2QW17|Q2QW17_ORYSJ Retrotransposon protein, putative, Ty1-co... 53 7e-06
tr|Q2QLK1|Q2QLK1_ORYSJ Retrotransposon protein, putative, unclas... 53 7e-06
tr|Q9FWI2|Q9FWI2_ORYSJ Os10g0106900 protein OS=Oryza sativa subs... 53 9e-06
tr|A8N9P1|A8N9P1_COPC7 Putative uncharacterized protein OS=Copri... 53 9e-06
tr|Q337X2|Q337X2_ORYSJ Retrotransposon protein, putative, unclas... 52 1e-05

>tr|Q60DG5|Q60DG5_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=B1110B01.4 PE=4 SV=1
Length = 1094

Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFGC Y KLD TRMVF+GY+ G KAYR+YDP ++F + V FDE
Sbjct: 407 KVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQ--GSKAYRMYDPVSRRFYVSRDVVFDE 464

Query: 286 SSM 278
++M
Sbjct: 465 AAM 467


>tr|Q25AF6|Q25AF6_ORYSA H0512B01.8 protein OS=Oryza sativa
GN=H0512B01.8 PE=4 SV=1
Length = 1454

Score = 56.6 bits (135), Expect = 6e-07
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+ FGC AY VK L+ KLD ST VF+GY++ GVKAYR+ DP+ ++ + A V FDE
Sbjct: 754 RTFGCLAY-VKELNDVRKLDDRSTPGVFIGYEE--GVKAYRVLDPRTRRVRLARDVIFDE 810

Query: 286 S 284
S
Sbjct: 811 S 811


>tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305

Score = 56.2 bits (134), Expect = 8e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = -2

Query: 463 VFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDES 284
VFGC Y + R KLDP S + +F+GY D VK YRL+DP +K + V F E+
Sbjct: 650 VFGCPVYVMYNSQERTKLDPKSRKCIFLGYAD--NVKGYRLWDPTARKVVVSRDVVFAEN 707

Query: 283 SMISPQQGDAS 251
+ S Q+ D++
Sbjct: 708 ELQSEQKNDST 718


>tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305

Score = 56.2 bits (134), Expect = 8e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = -2

Query: 463 VFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDES 284
VFGC Y + R KLDP S + +F+GY D VK YRL+DP +K + V F E+
Sbjct: 650 VFGCPVYVMYNSQERTKLDPKSRKCIFLGYAD--NVKGYRLWDPTARKVVVSRDVVFAEN 707

Query: 283 SMISPQQGDAS 251
+ S Q+ D++
Sbjct: 708 ELQSKQKNDST 718


>tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305

Score = 56.2 bits (134), Expect = 8e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = -2

Query: 463 VFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDES 284
VFGC Y + R KLDP S + +F+GY D VK YRL+DP +K + V F E+
Sbjct: 650 VFGCPVYVMYNSQERTKLDPKSRKCIFLGYAD--NVKGYRLWDPTARKVVVSRDVVFAEN 707

Query: 283 SMISPQQGDAS 251
+ S Q+ D++
Sbjct: 708 ELQSEQKNDST 718


>tr|Q2RBR6|Q2RBR6_ORYSJ Os11g0101300 protein OS=Oryza sativa subsp.
japonica GN=Os11g0101300 PE=4 SV=1
Length = 1399

Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFGC Y A KLD TRMVF+GY+ G KAYR+YDP ++ + V FDE
Sbjct: 707 RVFGCVGYVKTAKPNLRKLDDRGTRMVFIGYEQ--GSKAYRMYDPVARRVCVSRDVVFDE 764

Query: 286 SSMIS-----PQQGDA 254
++ S +GDA
Sbjct: 765 TTFWSWSGCEEHEGDA 780


>tr|Q0D5X2|Q0D5X2_ORYSJ Os07g0528100 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os07g0528100 PE=4 SV=1
Length = 1187

Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFGC Y KLD TRMVF+GY+ G KAYR+YDP ++ + V FDE
Sbjct: 500 KVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQ--GSKAYRMYDPVSRRVYVSRDVVFDE 557

Query: 286 SSM 278
++M
Sbjct: 558 AAM 560


>tr|B7EQQ7|B7EQQ7_ORYSJ cDNA clone:J023111N02, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 1094

Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFGC Y KLD TRMVF+GY+ G KAYR+YDP ++ + V FDE
Sbjct: 407 KVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQ--GSKAYRMYDPVSRRVYVSRDVVFDE 464

Query: 286 SSM 278
++M
Sbjct: 465 AAM 467


>tr|A8NGH6|A8NGH6_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_12545 PE=4 SV=1
Length = 753

Score = 55.8 bits (133), Expect = 1e-06
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFGC+AY R L P + + +FVGY G K +R Y+P KKF + FDE
Sbjct: 239 RVFGCTAYVFVQKDQRKSLQPHAQKCIFVGYPP--GYKGWRFYNPTTKKFVISERAIFDE 296

Query: 286 S-----SMISPQQGDASPPMLTLPSRP 221
S SP A PP PS P
Sbjct: 297 RYFPGLSRASPSTSTAVPPPAVPPSPP 323


>tr|Q2QYZ3|Q2QYZ3_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os12g01090 PE=4 SV=1
Length = 1465

Score = 55.5 bits (132), Expect = 1e-06
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = -2

Query: 466 QVFGCSAYPVKALSLRHKLDPTSTRMVFVGYDDRLGVKAYRLYDPQLKKFQFAHSVYFDE 287
+VFGC Y A KLD TRMVF+GY+ G KAYR+YDP ++ + V FDE
Sbjct: 773 RVFGCVGYVKTAKPNLRKLDDRGTRMVFIGYEQ--GSKAYRMYDPVAQRVCVSRDVVFDE 830

Query: 286 SSMIS-----PQQGDA 254
++ S +GDA
Sbjct: 831 TTFWSWSGCEEHEGDA 846