BP917355
Clone id YMU001_000099_G07
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCTTGTCTTCTTCGTCGCTACTGTCATCCATCCCAAACTTTTGAAACTCTTGTTCGGCT
TTGGCTTGCTCGTCTTGTGAACCAGTGTTACGCATAAGGTCTTGTAAACCTTGTCGTGGA
GCAGCCTTCCCATTAGCTTCTTCATTTACCTTTAGTTTCTCGTAATATGGCCAGATTCAT
GCCATCTGGTACACCATTGTCTTTGGCCTGAGGCATAAATTTCTTCACCACAGCAGTATC
TTTAACCTCAATGACAGTGCCACGTCCTTTCAAAGTTCCTAAATAAACACCCAAATGGTC
TGGAATAATGGTGGGAATAGGTCCATTTGGTGTCTTCATGTAGGCAGTCACTTCGTTTGA
GAGTTCCCAATCAGGAACAGTTCTCACTAGTGCTGGAGTTTTTATTTCCCAATTTCCTCC
TCCCCATTCAGGACCTTTTGGCAGCATGCTCTCAGCTGCAAAATTGGCTAACAGCGATCC
CTGGCCCCAGCTCGTTGATCGAACACTGAGGATCTTTGCACACTGT
■■Homology search results ■■ -
sp_hit_id P24534
Definition sp|P24534|EF1B_HUMAN Elongation factor 1-beta OS=Homo sapiens
Align length 53
Score (bit) 32.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917355|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_G07.
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P24534|EF1B_HUMAN Elongation factor 1-beta OS=Homo sapiens GN... 32 1.8
sp|Q9YGQ1|EF1B_CHICK Elongation factor 1-beta OS=Gallus gallus G... 32 1.8
sp|Q9CAF6|GYRA_ARATH Probable DNA gyrase subunit A, chloroplasti... 32 2.4
sp|Q6NV32|PTMAA_DANRE Prothymosin alpha-A OS=Danio rerio GN=ptma... 31 3.1
sp|P34826|EF1B_RABIT Elongation factor 1-beta OS=Oryctolagus cun... 31 4.1
sp|O70251|EF1B_MOUSE Elongation factor 1-beta OS=Mus musculus GN... 30 7.0
sp|P72827|FUTA1_SYNY3 Iron uptake protein A1 OS=Synechocystis sp... 30 9.2
sp|Q9HCM7|AUT2L_HUMAN AUTS2-like protein OS=Homo sapiens GN=AUTS... 30 9.2

>sp|P24534|EF1B_HUMAN Elongation factor 1-beta OS=Homo sapiens
GN=EEF1B2 PE=1 SV=3
Length = 225

Score = 32.0 bits (71), Expect = 1.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3

Query: 164 YEKLKVNEEANGKAAPRQGLQDLMRNTGSQDEQAKAEQEFQKFGMDDSSDEED 6
YEK K + KA + G D+ TGS +K + + FG DD + E+
Sbjct: 62 YEKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEE 114


>sp|Q9YGQ1|EF1B_CHICK Elongation factor 1-beta OS=Gallus gallus
GN=EEF1B PE=2 SV=3
Length = 225

Score = 32.0 bits (71), Expect = 1.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3

Query: 164 YEKLKVNEEANGKAAPRQGLQDLMRNTGSQDEQAKAEQEFQKFGMDDSSDEED 6
YEK K + KA + G D+ TGS +K + + FG DD + E+
Sbjct: 62 YEKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEE 114


>sp|Q9CAF6|GYRA_ARATH Probable DNA gyrase subunit A,
chloroplastic/mitochondrial OS=Arabidopsis thaliana
GN=GYRA PE=2 SV=2
Length = 950

Score = 31.6 bits (70), Expect = 2.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2

Query: 354 EVTAYMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDNGV 190
E+ YM P+ P II +LGV GRG V+ V+ A V+ P+ K N V
Sbjct: 301 ELLEYMPAPDFPTGGIIMGNLGVLDAYRTGRGRVV-VRGKAEVELLDPKTKRNAV 354


>sp|Q6NV32|PTMAA_DANRE Prothymosin alpha-A OS=Danio rerio GN=ptmaa
PE=2 SV=1
Length = 105

Score = 31.2 bits (69), Expect = 3.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = -3

Query: 161 EKLKVNEEANGKAAPRQGLQDLMRNTGSQ-------DEQAKAEQEFQKFGMDDSSDEE 9
EK +V E NGK AP G + N + D+ A+ ++E G DD DEE
Sbjct: 19 EKKQVEEAENGKDAPANGNAENEENGDQENEVDEEDDDVAEEDEEDDGEGDDDDEDEE 76


>sp|P34826|EF1B_RABIT Elongation factor 1-beta OS=Oryctolagus
cuniculus GN=EEF1B PE=1 SV=2
Length = 225

Score = 30.8 bits (68), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3

Query: 164 YEKLKVNEEANGKAAPRQGLQDLMRNTGSQDEQAKAEQEFQKFGMDDSSDEED 6
YEK K + KA G D+ TGS +K + + FG DD + E+
Sbjct: 62 YEKEKASLPGIKKALGTYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEE 114


>sp|O70251|EF1B_MOUSE Elongation factor 1-beta OS=Mus musculus
GN=Eef1b PE=1 SV=5
Length = 225

Score = 30.0 bits (66), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3

Query: 164 YEKLKVNEEANGKAAPRQGLQDLMRNTGSQDEQAKAEQEFQKFGMDDSSDEED 6
YEK K + K+ + G + TGS AK + + FG DD + E+
Sbjct: 62 YEKEKASLPGVKKSLGKYGPSSVEDTTGSGAADAKDDDDIDLFGSDDEEESEE 114


>sp|P72827|FUTA1_SYNY3 Iron uptake protein A1 OS=Synechocystis sp.
(strain PCC 6803) GN=futA1 PE=1 SV=1
Length = 360

Score = 29.6 bits (65), Expect = 9.2
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -2

Query: 492 SWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYMKT---PNG 322
+W +G ++NFA E GN + A+ D L+N T YM
Sbjct: 204 AWAKG-FVSNFAREPQ---------GNDTAQIEAVSSGEADLTLAN--TYYMGRLLESED 251

Query: 321 PIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVK 223
P I +++GV+ +GRGT + V VVK
Sbjct: 252 PAQKAIAENVGVFFPNQEGRGTHVNVSGVGVVK 284


>sp|Q9HCM7|AUT2L_HUMAN AUTS2-like protein OS=Homo sapiens GN=AUTS2L
PE=2 SV=3
Length = 972

Score = 29.6 bits (65), Expect = 9.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Frame = +2

Query: 401 FISQFPP---------PHSGPFGSMLSAAKLANSDPWPQLV 496
F FPP PH GPFGS+ A + SDP+ +V
Sbjct: 424 FFPSFPPAIPGLPTLLPHPGPFGSLQGAFQPKVSDPYRAVV 464


tr_hit_id A9S4J7
Definition tr|A9S4J7|A9S4J7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 101
Score (bit) 151.0
E-value 2.0e-35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917355|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_G07.
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S4J7|A9S4J7_PHYPA Predicted protein OS=Physcomitrella paten... 151 2e-35
tr|B8BF66|B8BF66_ORYSI Putative uncharacterized protein OS=Oryza... 140 4e-34
tr|A3BYP7|A3BYP7_ORYSJ Putative uncharacterized protein OS=Oryza... 140 4e-34
tr|Q9SCR5|Q9SCR5_ARATH Putative uncharacterized protein T20E23_2... 139 4e-34
tr|Q84TH3|Q84TH3_ARATH Putative uncharacterized protein At3g5060... 139 4e-34
tr|Q93YU3|Q93YU3_ARATH Putative uncharacterized protein At3g5060... 139 4e-34
tr|A4Y018|A4Y018_PSEMY Aldehyde dehydrogenase OS=Pseudomonas men... 37 0.61
tr|Q48926|Q48926_MYCBO Fatty acid synthase OS=Mycobacterium bovi... 35 1.8
tr|B5YCZ0|B5YCZ0_DICT6 Endoglucanase M OS=Dictyoglomus thermophi... 35 3.0
tr|A7EE85|A7EE85_SCLS1 Putative uncharacterized protein OS=Scler... 34 3.9
tr|A9U2J4|A9U2J4_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.0
tr|B1KVG3|B1KVG3_CLOBM Putative uncharacterized protein OS=Clost... 33 6.6
tr|Q88AH2|Q88AH2_PSESM Coniferyl aldehyde dehydrogenase OS=Pseud... 33 6.7
tr|A3W345|A3W345_9RHOB Putative uncharacterized protein OS=Roseo... 33 6.7
tr|Q6CAA6|Q6CAA6_YARLI YALI0D04466p OS=Yarrowia lipolytica GN=YA... 33 8.8

>tr|A9S4J7|A9S4J7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124044 PE=4 SV=1
Length = 1590

Score = 151 bits (381), Expect = 2e-35
Identities = 69/101 (68%), Positives = 83/101 (82%)
Frame = -2

Query: 525 QCAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVT 346
QC KILSVRS WGQ +NFAAESM+PKGPEW GGNWEI++ + + V DWEL+NEVT
Sbjct: 996 QCEKILSVRSAGWGQ----SNFAAESMMPKGPEWAGGNWEIRSQSDGKRVTDWELNNEVT 1051

Query: 345 AYMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVK 223
AYMKT NGPIPTI PDH+GVYLGTL+GRGTV+E+++ + K
Sbjct: 1052 AYMKTVNGPIPTITPDHIGVYLGTLRGRGTVVEIREDMLAK 1092


>tr|B8BF66|B8BF66_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31321 PE=4 SV=1
Length = 1625

Score = 140 bits (354), Expect(2) = 4e-34
Identities = 64/110 (58%), Positives = 82/110 (74%)
Frame = -2

Query: 516 KILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYM 337
+IL VRST W QG + ANFAAESM+PKGPEW GGNWEIKTP ++++P WEL+ EV YM
Sbjct: 984 RILRVRSTGWTQG-VFANFAAESMVPKGPEWAGGNWEIKTPTNMKSIPQWELAGEVMPYM 1042

Query: 336 KTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDNGVP 187
KT + IP++ DH+GVYLG +KGRGTV+EV + ++VK + DN P
Sbjct: 1043 KTTDAGIPSVTADHIGVYLGVMKGRGTVVEVSEKSLVKAIAAASGDNARP 1092



Score = 27.7 bits (60), Expect(2) = 4e-34
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 4/29 (13%)
Frame = -3

Query: 80 SQDEQAKAEQEFQK--FGMDD--SSDEED 6
S DEQAKA +EF+K +G+ D SSDE++
Sbjct: 1124 SADEQAKAAEEFKKTLYGVVDGGSSDEDE 1152


>tr|A3BYP7|A3BYP7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_028169 PE=4 SV=1
Length = 1540

Score = 140 bits (354), Expect(2) = 4e-34
Identities = 64/110 (58%), Positives = 82/110 (74%)
Frame = -2

Query: 516 KILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYM 337
+IL VRST W QG + ANFAAESM+PKGPEW GGNWEIKTP ++++P WEL+ EV YM
Sbjct: 899 RILRVRSTGWTQG-VFANFAAESMVPKGPEWAGGNWEIKTPTNMKSIPQWELAGEVMPYM 957

Query: 336 KTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDNGVP 187
KT + IP++ DH+GVYLG +KGRGTV+EV + ++VK + DN P
Sbjct: 958 KTTDAGIPSVTADHIGVYLGVMKGRGTVVEVSEKSLVKAIAAASGDNARP 1007



Score = 27.7 bits (60), Expect(2) = 4e-34
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 4/29 (13%)
Frame = -3

Query: 80 SQDEQAKAEQEFQK--FGMDD--SSDEED 6
S DEQAKA +EF+K +G+ D SSDE++
Sbjct: 1039 SADEQAKAAEEFKKTLYGVVDGGSSDEDE 1067


>tr|Q9SCR5|Q9SCR5_ARATH Putative uncharacterized protein T20E23_200
OS=Arabidopsis thaliana GN=T20E23_200 PE=4 SV=1
Length = 852

Score = 139 bits (351), Expect(2) = 4e-34
Identities = 62/101 (61%), Positives = 80/101 (79%)
Frame = -2

Query: 522 CAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343
C +IL VRST W QG + ANFAAESM+PKGPEWGGGNWEIKTP ++++P WEL+ EV
Sbjct: 219 CERILRVRSTGWTQG-IFANFAAESMVPKGPEWGGGNWEIKTPTDMKSIPKWELAGEVMP 277

Query: 342 YMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKK 220
YMK +G IP+I+ DH+GVYLG +KGR V+E+K+ ++V K
Sbjct: 278 YMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSK 318



Score = 28.9 bits (63), Expect(2) = 4e-34
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = -3

Query: 131 GKAAPRQGLQDLMRNTGSQDEQAKAEQEFQK-----FGMDDSSDEE 9
G+++ GL+ L + + DEQAKA +EF+K G SSDEE
Sbjct: 339 GESSSMMGLESLGKQNVA-DEQAKAAEEFKKTMYGATGDGSSSDEE 383


>tr|Q84TH3|Q84TH3_ARATH Putative uncharacterized protein At3g50600
OS=Arabidopsis thaliana GN=At3g50600 PE=2 SV=1
Length = 667

Score = 139 bits (351), Expect(2) = 4e-34
Identities = 62/101 (61%), Positives = 80/101 (79%)
Frame = -2

Query: 522 CAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343
C +IL VRST W QG + ANFAAESM+PKGPEWGGGNWEIKTP ++++P WEL+ EV
Sbjct: 34 CERILRVRSTGWTQG-IFANFAAESMVPKGPEWGGGNWEIKTPTDMKSIPKWELAGEVMP 92

Query: 342 YMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKK 220
YMK +G IP+I+ DH+GVYLG +KGR V+E+K+ ++V K
Sbjct: 93 YMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSK 133



Score = 28.9 bits (63), Expect(2) = 4e-34
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = -3

Query: 131 GKAAPRQGLQDLMRNTGSQDEQAKAEQEFQK-----FGMDDSSDEE 9
G+++ GL+ L + + DEQAKA +EF+K G SSDEE
Sbjct: 154 GESSSMMGLESLGKQNVA-DEQAKAAEEFKKTMYGATGDGSSSDEE 198


>tr|Q93YU3|Q93YU3_ARATH Putative uncharacterized protein At3g50600
OS=Arabidopsis thaliana GN=At3g50600 PE=2 SV=1
Length = 654

Score = 139 bits (351), Expect(2) = 4e-34
Identities = 62/101 (61%), Positives = 80/101 (79%)
Frame = -2

Query: 522 CAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343
C +IL VRST W QG + ANFAAESM+PKGPEWGGGNWEIKTP ++++P WEL+ EV
Sbjct: 21 CERILRVRSTGWTQG-IFANFAAESMVPKGPEWGGGNWEIKTPTDMKSIPKWELAGEVMP 79

Query: 342 YMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKK 220
YMK +G IP+I+ DH+GVYLG +KGR V+E+K+ ++V K
Sbjct: 80 YMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSK 120



Score = 28.9 bits (63), Expect(2) = 4e-34
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = -3

Query: 131 GKAAPRQGLQDLMRNTGSQDEQAKAEQEFQK-----FGMDDSSDEE 9
G+++ GL+ L + + DEQAKA +EF+K G SSDEE
Sbjct: 141 GESSSMMGLESLGKQNVA-DEQAKAAEEFKKTMYGATGDGSSSDEE 185


>tr|A4Y018|A4Y018_PSEMY Aldehyde dehydrogenase OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_4187 PE=3 SV=1
Length = 476

Score = 37.0 bits (84), Expect = 0.61
Identities = 36/106 (33%), Positives = 53/106 (50%)
Frame = -2

Query: 513 ILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYMK 334
+L +TS G+ + A AAE++ P E GG K+PA+V E + E A+ K
Sbjct: 199 LLFTGATSIGRHVMRA--AAENLTPVTLELGG-----KSPAIVSADVPLEHAAERIAFGK 251

Query: 333 TPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDN 196
T N + PD+ V + + G V +D VV++F PQ KDN
Sbjct: 252 TLNAGQTCVAPDY--VLVPRDRVDGFVSAYRD--VVQRFYPQLKDN 293


>tr|Q48926|Q48926_MYCBO Fatty acid synthase OS=Mycobacterium bovis
GN=fas PE=3 SV=1
Length = 2796

Score = 35.4 bits (80), Expect = 1.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2

Query: 453 ESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343
E +LP P W G+W+ TP+ V PD EL + VTA
Sbjct: 1860 EGVLPPRPAWCWGSWDWTTPSTVAGRPDSELIDLVTA 1896


>tr|B5YCZ0|B5YCZ0_DICT6 Endoglucanase M OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=DICTH_0516
PE=4 SV=1
Length = 336

Score = 34.7 bits (78), Expect = 3.0
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Frame = -2

Query: 375 PDWELSNEVTAYMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTA------VVKKFM 214
PD ++ +VTA+ TP G P + + L G+G I++KD+A +V+K
Sbjct: 213 PDLAIAIDVTAHSDTPKG------PKRMSLEL----GKGPAIKIKDSASISDRRIVEKLK 262

Query: 213 PQAKDNGVP--------DGMNLAILRET 154
A+ NG+P G N A L+ T
Sbjct: 263 NIAEKNGIPYQIEILLRGGTNAAALQRT 290


>tr|A7EE85|A7EE85_SCLS1 Putative uncharacterized protein
OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
Ss-1) GN=SS1G_03625 PE=4 SV=1
Length = 833

Score = 34.3 bits (77), Expect = 3.9
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -3

Query: 170 PYYEKLKVNEEANGKAAPRQGLQDLMRNTGSQDEQAKAEQEFQKFGMDDSSDEEDK 3
P ++ + E NG A + DL+ N +E ++ EF++ DDSSD ED+
Sbjct: 49 PTIDEHSIKVEGNGSATITEVSVDLLPNREVYEEVYSSDSEFEEDTDDDSSDSEDE 104