BP917355 |
Clone id |
YMU001_000099_G07 |
Library |
YMU01 |
Length |
526 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000099_G07. |
Accession |
BP917355 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4009Contig1 |
Sequence |
GGCTTGTCTTCTTCGTCGCTACTGTCATCCATCCCAAACTTTTGAAACTCTTGTTCGGCT TTGGCTTGCTCGTCTTGTGAACCAGTGTTACGCATAAGGTCTTGTAAACCTTGTCGTGGA GCAGCCTTCCCATTAGCTTCTTCATTTACCTTTAGTTTCTCGTAATATGGCCAGATTCAT GCCATCTGGTACACCATTGTCTTTGGCCTGAGGCATAAATTTCTTCACCACAGCAGTATC TTTAACCTCAATGACAGTGCCACGTCCTTTCAAAGTTCCTAAATAAACACCCAAATGGTC TGGAATAATGGTGGGAATAGGTCCATTTGGTGTCTTCATGTAGGCAGTCACTTCGTTTGA GAGTTCCCAATCAGGAACAGTTCTCACTAGTGCTGGAGTTTTTATTTCCCAATTTCCTCC TCCCCATTCAGGACCTTTTGGCAGCATGCTCTCAGCTGCAAAATTGGCTAACAGCGATCC CTGGCCCCAGCTCGTTGATCGAACACTGAGGATCTTTGCACACTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P24534 |
Definition |
sp|P24534|EF1B_HUMAN Elongation factor 1-beta OS=Homo sapiens |
Align length |
53 |
Score (bit) |
32.0 |
E-value |
1.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S4J7 |
Definition |
tr|A9S4J7|A9S4J7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
101 |
Score (bit) |
151.0 |
E-value |
2.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917355|Adiantum capillus-veneris mRNA, clone: YMU001_000099_G07. (526 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S4J7|A9S4J7_PHYPA Predicted protein OS=Physcomitrella paten... 151 2e-35 tr|B8BF66|B8BF66_ORYSI Putative uncharacterized protein OS=Oryza... 140 4e-34 tr|A3BYP7|A3BYP7_ORYSJ Putative uncharacterized protein OS=Oryza... 140 4e-34 tr|Q9SCR5|Q9SCR5_ARATH Putative uncharacterized protein T20E23_2... 139 4e-34 tr|Q84TH3|Q84TH3_ARATH Putative uncharacterized protein At3g5060... 139 4e-34 tr|Q93YU3|Q93YU3_ARATH Putative uncharacterized protein At3g5060... 139 4e-34 tr|A4Y018|A4Y018_PSEMY Aldehyde dehydrogenase OS=Pseudomonas men... 37 0.61 tr|Q48926|Q48926_MYCBO Fatty acid synthase OS=Mycobacterium bovi... 35 1.8 tr|B5YCZ0|B5YCZ0_DICT6 Endoglucanase M OS=Dictyoglomus thermophi... 35 3.0 tr|A7EE85|A7EE85_SCLS1 Putative uncharacterized protein OS=Scler... 34 3.9 tr|A9U2J4|A9U2J4_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.0 tr|B1KVG3|B1KVG3_CLOBM Putative uncharacterized protein OS=Clost... 33 6.6 tr|Q88AH2|Q88AH2_PSESM Coniferyl aldehyde dehydrogenase OS=Pseud... 33 6.7 tr|A3W345|A3W345_9RHOB Putative uncharacterized protein OS=Roseo... 33 6.7 tr|Q6CAA6|Q6CAA6_YARLI YALI0D04466p OS=Yarrowia lipolytica GN=YA... 33 8.8
>tr|A9S4J7|A9S4J7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124044 PE=4 SV=1 Length = 1590
Score = 151 bits (381), Expect = 2e-35 Identities = 69/101 (68%), Positives = 83/101 (82%) Frame = -2
Query: 525 QCAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVT 346 QC KILSVRS WGQ +NFAAESM+PKGPEW GGNWEI++ + + V DWEL+NEVT Sbjct: 996 QCEKILSVRSAGWGQ----SNFAAESMMPKGPEWAGGNWEIRSQSDGKRVTDWELNNEVT 1051
Query: 345 AYMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVK 223 AYMKT NGPIPTI PDH+GVYLGTL+GRGTV+E+++ + K Sbjct: 1052 AYMKTVNGPIPTITPDHIGVYLGTLRGRGTVVEIREDMLAK 1092
>tr|B8BF66|B8BF66_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31321 PE=4 SV=1 Length = 1625
Score = 140 bits (354), Expect(2) = 4e-34 Identities = 64/110 (58%), Positives = 82/110 (74%) Frame = -2
Query: 516 KILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYM 337 +IL VRST W QG + ANFAAESM+PKGPEW GGNWEIKTP ++++P WEL+ EV YM Sbjct: 984 RILRVRSTGWTQG-VFANFAAESMVPKGPEWAGGNWEIKTPTNMKSIPQWELAGEVMPYM 1042
Query: 336 KTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDNGVP 187 KT + IP++ DH+GVYLG +KGRGTV+EV + ++VK + DN P Sbjct: 1043 KTTDAGIPSVTADHIGVYLGVMKGRGTVVEVSEKSLVKAIAAASGDNARP 1092
Score = 27.7 bits (60), Expect(2) = 4e-34 Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 4/29 (13%) Frame = -3
Query: 80 SQDEQAKAEQEFQK--FGMDD--SSDEED 6 S DEQAKA +EF+K +G+ D SSDE++ Sbjct: 1124 SADEQAKAAEEFKKTLYGVVDGGSSDEDE 1152
>tr|A3BYP7|A3BYP7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028169 PE=4 SV=1 Length = 1540
Score = 140 bits (354), Expect(2) = 4e-34 Identities = 64/110 (58%), Positives = 82/110 (74%) Frame = -2
Query: 516 KILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYM 337 +IL VRST W QG + ANFAAESM+PKGPEW GGNWEIKTP ++++P WEL+ EV YM Sbjct: 899 RILRVRSTGWTQG-VFANFAAESMVPKGPEWAGGNWEIKTPTNMKSIPQWELAGEVMPYM 957
Query: 336 KTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDNGVP 187 KT + IP++ DH+GVYLG +KGRGTV+EV + ++VK + DN P Sbjct: 958 KTTDAGIPSVTADHIGVYLGVMKGRGTVVEVSEKSLVKAIAAASGDNARP 1007
Score = 27.7 bits (60), Expect(2) = 4e-34 Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 4/29 (13%) Frame = -3
Query: 80 SQDEQAKAEQEFQK--FGMDD--SSDEED 6 S DEQAKA +EF+K +G+ D SSDE++ Sbjct: 1039 SADEQAKAAEEFKKTLYGVVDGGSSDEDE 1067
>tr|Q9SCR5|Q9SCR5_ARATH Putative uncharacterized protein T20E23_200 OS=Arabidopsis thaliana GN=T20E23_200 PE=4 SV=1 Length = 852
Score = 139 bits (351), Expect(2) = 4e-34 Identities = 62/101 (61%), Positives = 80/101 (79%) Frame = -2
Query: 522 CAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343 C +IL VRST W QG + ANFAAESM+PKGPEWGGGNWEIKTP ++++P WEL+ EV Sbjct: 219 CERILRVRSTGWTQG-IFANFAAESMVPKGPEWGGGNWEIKTPTDMKSIPKWELAGEVMP 277
Query: 342 YMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKK 220 YMK +G IP+I+ DH+GVYLG +KGR V+E+K+ ++V K Sbjct: 278 YMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSK 318
Score = 28.9 bits (63), Expect(2) = 4e-34 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Frame = -3
Query: 131 GKAAPRQGLQDLMRNTGSQDEQAKAEQEFQK-----FGMDDSSDEE 9 G+++ GL+ L + + DEQAKA +EF+K G SSDEE Sbjct: 339 GESSSMMGLESLGKQNVA-DEQAKAAEEFKKTMYGATGDGSSSDEE 383
>tr|Q84TH3|Q84TH3_ARATH Putative uncharacterized protein At3g50600 OS=Arabidopsis thaliana GN=At3g50600 PE=2 SV=1 Length = 667
Score = 139 bits (351), Expect(2) = 4e-34 Identities = 62/101 (61%), Positives = 80/101 (79%) Frame = -2
Query: 522 CAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343 C +IL VRST W QG + ANFAAESM+PKGPEWGGGNWEIKTP ++++P WEL+ EV Sbjct: 34 CERILRVRSTGWTQG-IFANFAAESMVPKGPEWGGGNWEIKTPTDMKSIPKWELAGEVMP 92
Query: 342 YMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKK 220 YMK +G IP+I+ DH+GVYLG +KGR V+E+K+ ++V K Sbjct: 93 YMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSK 133
Score = 28.9 bits (63), Expect(2) = 4e-34 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Frame = -3
Query: 131 GKAAPRQGLQDLMRNTGSQDEQAKAEQEFQK-----FGMDDSSDEE 9 G+++ GL+ L + + DEQAKA +EF+K G SSDEE Sbjct: 154 GESSSMMGLESLGKQNVA-DEQAKAAEEFKKTMYGATGDGSSSDEE 198
>tr|Q93YU3|Q93YU3_ARATH Putative uncharacterized protein At3g50600 OS=Arabidopsis thaliana GN=At3g50600 PE=2 SV=1 Length = 654
Score = 139 bits (351), Expect(2) = 4e-34 Identities = 62/101 (61%), Positives = 80/101 (79%) Frame = -2
Query: 522 CAKILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343 C +IL VRST W QG + ANFAAESM+PKGPEWGGGNWEIKTP ++++P WEL+ EV Sbjct: 21 CERILRVRSTGWTQG-IFANFAAESMVPKGPEWGGGNWEIKTPTDMKSIPKWELAGEVMP 79
Query: 342 YMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKK 220 YMK +G IP+I+ DH+GVYLG +KGR V+E+K+ ++V K Sbjct: 80 YMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSK 120
Score = 28.9 bits (63), Expect(2) = 4e-34 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Frame = -3
Query: 131 GKAAPRQGLQDLMRNTGSQDEQAKAEQEFQK-----FGMDDSSDEE 9 G+++ GL+ L + + DEQAKA +EF+K G SSDEE Sbjct: 141 GESSSMMGLESLGKQNVA-DEQAKAAEEFKKTMYGATGDGSSSDEE 185
>tr|A4Y018|A4Y018_PSEMY Aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=Pmen_4187 PE=3 SV=1 Length = 476
Score = 37.0 bits (84), Expect = 0.61 Identities = 36/106 (33%), Positives = 53/106 (50%) Frame = -2
Query: 513 ILSVRSTSWGQGSLLANFAAESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTAYMK 334 +L +TS G+ + A AAE++ P E GG K+PA+V E + E A+ K Sbjct: 199 LLFTGATSIGRHVMRA--AAENLTPVTLELGG-----KSPAIVSADVPLEHAAERIAFGK 251
Query: 333 TPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTAVVKKFMPQAKDN 196 T N + PD+ V + + G V +D VV++F PQ KDN Sbjct: 252 TLNAGQTCVAPDY--VLVPRDRVDGFVSAYRD--VVQRFYPQLKDN 293
>tr|Q48926|Q48926_MYCBO Fatty acid synthase OS=Mycobacterium bovis GN=fas PE=3 SV=1 Length = 2796
Score = 35.4 bits (80), Expect = 1.8 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -2
Query: 453 ESMLPKGPEWGGGNWEIKTPALVRTVPDWELSNEVTA 343 E +LP P W G+W+ TP+ V PD EL + VTA Sbjct: 1860 EGVLPPRPAWCWGSWDWTTPSTVAGRPDSELIDLVTA 1896
>tr|B5YCZ0|B5YCZ0_DICT6 Endoglucanase M OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=DICTH_0516 PE=4 SV=1 Length = 336
Score = 34.7 bits (78), Expect = 3.0 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Frame = -2
Query: 375 PDWELSNEVTAYMKTPNGPIPTIIPDHLGVYLGTLKGRGTVIEVKDTA------VVKKFM 214 PD ++ +VTA+ TP G P + + L G+G I++KD+A +V+K Sbjct: 213 PDLAIAIDVTAHSDTPKG------PKRMSLEL----GKGPAIKIKDSASISDRRIVEKLK 262
Query: 213 PQAKDNGVP--------DGMNLAILRET 154 A+ NG+P G N A L+ T Sbjct: 263 NIAEKNGIPYQIEILLRGGTNAAALQRT 290
>tr|A7EE85|A7EE85_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_03625 PE=4 SV=1 Length = 833
Score = 34.3 bits (77), Expect = 3.9 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = -3
Query: 170 PYYEKLKVNEEANGKAAPRQGLQDLMRNTGSQDEQAKAEQEFQKFGMDDSSDEEDK 3 P ++ + E NG A + DL+ N +E ++ EF++ DDSSD ED+ Sbjct: 49 PTIDEHSIKVEGNGSATITEVSVDLLPNREVYEEVYSSDSEFEEDTDDDSSDSEDE 104
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