BP917356
Clone id YMU001_000099_G08
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATAGCAATGATAACCAAGTGTGAGATGTAATATACCCAAAACAACGGTGTCAACTATGTT
CCTTAATTGTCTACCTTGGAACTCTGCAGTGCACTGCTTAAGCCCAAACTCTCTAAAGCA
ACCTGCAGAGCCCAAGCAAAGATGCCGTCGCCTCTGGTAACCCCTTGGCTTGTCCCAACA
AGGTTTATCACATCCATATCGACGAACTATGCGCATCATGATCAGCTGCCGCCCCGTTAA
GTTTCATCACATAGTCATGTTGCAGTACATTGAAAGACTCTGCTGTGCTTCCCTCATTCA
GCACTTCACTGATATCATTACTGCCATCCACGTGACCAAG
■■Homology search results ■■ -
sp_hit_id O22232
Definition sp|O22232|FBL52_ARATH Putative F-box/LRR-repeat protein At3g44810 OS=Arabidopsis thaliana
Align length 37
Score (bit) 28.9
E-value 8.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917356|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_G08.
(340 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O22232|FBL52_ARATH Putative F-box/LRR-repeat protein At3g4481... 29 8.3

>sp|O22232|FBL52_ARATH Putative F-box/LRR-repeat protein At3g44810
OS=Arabidopsis thaliana GN=At3g44810 PE=4 SV=2
Length = 448

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2

Query: 41 TTVSTMFLNCLPWNSAVHCLSPNSLKQPAEPKQRCRR 151
++VST LNCLP VH LS KQ A +R
Sbjct: 2 SSVSTASLNCLPDELLVHVLSSLETKQAASTSVLSKR 38


tr_hit_id B3EK63
Definition tr|B3EK63|B3EK63_CHLPB Alpha/beta hydrolase fold OS=Chlorobium phaeobacteroides (strain BS1)
Align length 43
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917356|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_G08.
(340 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3EK63|B3EK63_CHLPB Alpha/beta hydrolase fold OS=Chlorobium p... 35 1.9
tr|A7JS30|A7JS30_PASHA Putative uncharacterized protein OS=Mannh... 34 3.2
tr|B0QTL8|B0QTL8_HAEPR Putative uncharacterized protein OS=Haemo... 33 9.3
tr|B1TWA1|B1TWA1_MICLU Aminotransferase class IV OS=Micrococcus ... 33 9.3

>tr|B3EK63|B3EK63_CHLPB Alpha/beta hydrolase fold OS=Chlorobium
phaeobacteroides (strain BS1) GN=Cphamn1_1567 PE=4 SV=1
Length = 325

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2

Query: 212 RIMISCRPVKFHHIVMLQYIERLCCASLIQHFTDIITAIHVTK 340
R++++ PV FH I++ Q LCC ++Q T IT+ VT+
Sbjct: 205 RVVLARNPVSFHDIMVGQKSLELCCPEVVQKTTKQITSREVTR 247


>tr|A7JS30|A7JS30_PASHA Putative uncharacterized protein
OS=Mannheimia haemolytica PHL213 GN=MHA_0918 PE=4 SV=1
Length = 141

Score = 34.3 bits (77), Expect = 3.2
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2

Query: 297 MREAQQSLSMYCNMTM**NLTGRQLIMMRIVRRYG-CDKPCWDKPRGYQRR 148
M QQ + YC +T L+GR L +M+I +Y CD+ W+ R YQR+
Sbjct: 83 MLRNQQIYADYCQLTEQGGLSGR-LAIMQICPKYSVCDRVAWEAVRYYQRK 132


>tr|B0QTL8|B0QTL8_HAEPR Putative uncharacterized protein
OS=Haemophilus parasuis 29755 GN=HPS_00175 PE=4 SV=1
Length = 141

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2

Query: 285 QQSLSMYCNMTM**NLTGRQLIMMRIVRRYG-CDKPCWDKPRGYQR 151
QQ + +C++T L+GR IM R+ ++Y CD+ W+ R YQR
Sbjct: 87 QQLYADFCHLTETDKLSGRMAIM-RLCQKYQICDRTAWEVVRYYQR 131


>tr|B1TWA1|B1TWA1_MICLU Aminotransferase class IV OS=Micrococcus
luteus NCTC 2665 GN=MlutDRAFT_0647 PE=4 SV=1
Length = 333

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -3

Query: 200 DMDVINLVGTSQGVTRGDGIFAWALQVA 117
D V +L T QGVTRGDGIF AL VA
Sbjct: 32 DPAVPHLSVTDQGVTRGDGIFETALAVA 59