BP917363
Clone id YMU001_000099_H09
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTAGATTTTTGTCTCAGTGCTAGTGTCGATCTAAGGGTCTAGAGAATTGTGTGAGAGAT
CTGTTAAGTTTGTTTCAGGCCAGGACCTAGAAGAACATTAAAGACCACAGCAACACCCAG
TGCAAAACATACTCCAGTGAGCAATAAGAAGCAATCTGGGAAAAACTCACGCAACGCACA
ATCAAGCTCAAAATCACGCAAGCAAGGACCTGGCCCAATTTTCAGAAATAAGGCAAGTCT
GAAAAGTCTCTGTATCATCTGAATACAGCTCAAACTCATTACATTCATCTTTATGTCAGG
ACTTAGTGCAGGATAGTCAAAGGCACTATCCAGTAGGTTCGAATAACAAGATAAAGGGTC
GAAATTTGGATGACCAAATGCAACATCCAAATTCAAAGGAAAAGAATATCACGGAACGTA
TTGCGAGACAGACGCCAAAATTTGCAGCTCCCTCAAGTAGTGTGTCACGAAGCCGTGGAA
AACATCAGCAAGCAAGAAGTCAGCCAGAGTCGACCAGAGGCTTTGCAAGGTCTGTGATTG
CTTCAAAGGACAATGCAGACTCTTTCAGTGTCCCTTCTCA
■■Homology search results ■■ -
sp_hit_id Q54JC7
Definition sp|Q54JC7|Y1197_DICDI Probable serine/threonine-protein kinase DDB_G0288147 OS=Dictyostelium discoideum
Align length 54
Score (bit) 33.5
E-value 0.79
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917363|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H09.
(580 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54JC7|Y1197_DICDI Probable serine/threonine-protein kinase D... 33 0.79
sp|P15205|MAP1B_RAT Microtubule-associated protein 1B OS=Rattus ... 33 1.0
sp|O75128|COBL_HUMAN Protein cordon-bleu OS=Homo sapiens GN=COBL... 33 1.3
sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3 33 1.3
sp|P14873|MAP1B_MOUSE Microtubule-associated protein 1B OS=Mus m... 32 1.8
sp|Q9P6K0|YLA3_SCHPO Uncharacterized HTH La-type RNA-binding pro... 32 2.3
sp|Q8FDK9|YGIQ_ECOL6 UPF0313 protein ygiQ OS=Escherichia coli O6... 32 2.3
sp|Q7VWV8|NAGZ_BORPE Beta-hexosaminidase OS=Bordetella pertussis... 31 5.1
sp|Q7W9J5|NAGZ_BORPA Beta-hexosaminidase OS=Bordetella parapertu... 31 5.1
sp|Q7WH65|NAGZ_BORBR Beta-hexosaminidase OS=Bordetella bronchise... 31 5.1
sp|P29175|GAG_MSVFR Gag polyprotein OS=FBR murine osteosarcoma v... 31 5.1
sp|Q80S27|POLS_MIDDV Structural polyprotein OS=Middelburg virus ... 30 6.7
sp|Q17WQ8|IF2_HELAH Translation initiation factor IF-2 OS=Helico... 30 6.7
sp|P50766|VE2_HPV20 Regulatory protein E2 OS=Human papillomaviru... 30 6.7
sp|Q27474|DNLI1_CAEEL DNA ligase 1 OS=Caenorhabditis elegans GN=... 30 6.7
sp|Q6NTZ5|XPO6B_XENLA Exportin-6-B OS=Xenopus laevis GN=xpo6-B P... 30 8.7
sp|P35820|PSC_DROME Polycomb group protein Psc OS=Drosophila mel... 30 8.7
sp|Q5T6C5|AT7L2_HUMAN Ataxin-7-like protein 2 OS=Homo sapiens GN... 30 8.7
sp|Q96F81|DISP1_HUMAN Protein dispatched homolog 1 OS=Homo sapie... 30 8.7
sp|Q54DK3|CDC7_DICDI Probable serine/threonine-protein kinase cd... 30 8.7

>sp|Q54JC7|Y1197_DICDI Probable serine/threonine-protein kinase
DDB_G0288147 OS=Dictyostelium discoideum GN=DDB_G0288147
PE=3 SV=1
Length = 1347

Score = 33.5 bits (75), Expect = 0.79
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2

Query: 86 PRRTLKTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSRKQGPGPIFRNKASLKS 247
PR T TT T + T S K + + ++ +SKSRK P I NK +KS
Sbjct: 344 PRSTASTTTTTTTTTTTTSPKSNNHHHHQHHHQNSKSRK--PSTIIINKKKIKS 395


>sp|P15205|MAP1B_RAT Microtubule-associated protein 1B OS=Rattus
norvegicus GN=Map1b PE=1 SV=2
Length = 2459

Score = 33.1 bits (74), Expect = 1.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2

Query: 92 RTLKTTATPSAKHTPVSNKKQSGKNSRNAQSSS--KSRKQGPGPIFRNKAS 238
+ +KTT TP K T K + KN+ NA +S K+ GPG K+S
Sbjct: 2289 KAMKTTTTPEVKATRGEEKDKETKNAANASASKSVKTATAGPGTTKTAKSS 2339


>sp|O75128|COBL_HUMAN Protein cordon-bleu OS=Homo sapiens GN=COBL
PE=1 SV=2
Length = 1261

Score = 32.7 bits (73), Expect = 1.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2

Query: 101 KTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSRKQGPGPIFRNKASLKSLCII 259
+T AT PV+ K + KN+ A +S R Q PG +R K L + II
Sbjct: 659 RTQATERVNSQPVNEKDSNDKNAALAPTSWHQRGQNPGKSYRLKHGLTTYKII 711


>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
Length = 4061

Score = 32.7 bits (73), Expect = 1.3
Identities = 31/162 (19%), Positives = 59/162 (36%)
Frame = +3

Query: 36 GSRELCERSVKFVSGQDLEEH*RPQQHPVQNILQ*AIRSNLGKTHATHNQAQNHASKDLA 215
GSR ++ K D H + H + + S +G+ ++ ++ H ++
Sbjct: 1212 GSRSASRQTRKDKQSGDGSRHSGSRHHEAASWADSSRHSQVGQEQSSGSRTSRHQGSSVS 1271

Query: 216 QFSEIRQXXXXXXXXXXXXXXXXXXLCQDLVQDSQRHYPVGSNNKIKGRNLDDQMQHPNS 395
Q S+ + ++ +D RH G + +D+ H +S
Sbjct: 1272 QDSDSERHSDDSERLSGSASRNHHGSSREQSRDGSRH---------PGFHQEDRASHGHS 1322

Query: 396 KEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRG 521
+ + RQ+ SSS ++ H+QARS P G
Sbjct: 1323 ADSS------RQSGTHHTESSSHGQAVSSHEQARSSPGERHG 1358


>sp|P14873|MAP1B_MOUSE Microtubule-associated protein 1B OS=Mus
musculus GN=Map1b PE=1 SV=1
Length = 2464

Score = 32.3 bits (72), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2

Query: 92 RTLKTTATPSAKHTPVSNKKQSGKNSRNAQS--SSKSRKQGPGPIFRNKAS 238
+ KTT TP K T K + KN+ NA + S+K+ GPG K+S
Sbjct: 2294 KATKTTTTPEVKATRGEEKDKETKNAANASASKSAKTATTGPGTTKTAKSS 2344


>sp|Q9P6K0|YLA3_SCHPO Uncharacterized HTH La-type RNA-binding
protein C1527.03 OS=Schizosaccharomyces pombe
GN=SPAC1527.03 PE=1 SV=1
Length = 475

Score = 32.0 bits (71), Expect = 2.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2

Query: 107 TATPSAKHTPVSNKKQSGKNSRNAQSSSKSRKQG 208
T TP+ HTP+SN+K S + ++ + R++G
Sbjct: 149 TITPNFTHTPISNRKSSRSRNDGSRRNGNGRRRG 182


>sp|Q8FDK9|YGIQ_ECOL6 UPF0313 protein ygiQ OS=Escherichia coli O6
GN=ygiQ PE=3 SV=1
Length = 739

Score = 32.0 bits (71), Expect = 2.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +2

Query: 71 CFRPGP--------RRTLKTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSRKQGPGPIFR 226
C P P RR + T KHTP++ ++Q+ ++ A SS++SR Q G R
Sbjct: 674 CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKA-SSTQSRLQNAGAKKR 732

Query: 227 NKASL 241
KA++
Sbjct: 733 PKAAV 737


>sp|Q7VWV8|NAGZ_BORPE Beta-hexosaminidase OS=Bordetella pertussis
GN=nagZ PE=3 SV=1
Length = 352

Score = 30.8 bits (68), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3

Query: 375 QMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQAR 497
Q+QHP + ERI R P+FAAP ++ ++Q AR
Sbjct: 307 QVQHPAAS----VERIRRLLPRFAAPDWDTLQNDSRYQHAR 343


>sp|Q7W9J5|NAGZ_BORPA Beta-hexosaminidase OS=Bordetella
parapertussis GN=nagZ PE=3 SV=2
Length = 353

Score = 30.8 bits (68), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3

Query: 375 QMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQAR 497
Q+QHP + ERI R P+FAAP ++ ++Q AR
Sbjct: 308 QVQHPAAS----VERIRRLMPRFAAPDWDTLQNDSRYQHAR 344


>sp|Q7WH65|NAGZ_BORBR Beta-hexosaminidase OS=Bordetella
bronchiseptica GN=nagZ PE=3 SV=1
Length = 353

Score = 30.8 bits (68), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3

Query: 375 QMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQAR 497
Q+QHP + ERI R P+FAAP ++ ++Q AR
Sbjct: 308 QVQHPAAS----VERIRRLMPRFAAPDWDTLQNDSRYQHAR 344


tr_hit_id Q22WH7
Definition tr|Q22WH7|Q22WH7_TETTH HMG box family protein (Fragment) OS=Tetrahymena thermophila SB210
Align length 78
Score (bit) 31.6
E-value 0.078
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917363|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H09.
(580 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q22WH7|Q22WH7_TETTH HMG box family protein (Fragment) OS=Tetr... 32 0.078
tr|Q08BQ6|Q08BQ6_DANRE Zgc:152952 OS=Danio rerio GN=zgc:152952 P... 37 1.0
tr|A4IDS0|A4IDS0_LEIIN Putative uncharacterized protein OS=Leish... 37 1.0
tr|A7S1V9|A7S1V9_NEMVE Predicted protein OS=Nematostella vectens... 37 1.0
tr|B3NTM5|B3NTM5_DROER GG17874 OS=Drosophila erecta GN=GG17874 P... 28 1.6
tr|B8A4S2|B8A4S2_DANRE Novel protein similar to vertebrate testi... 35 2.3
tr|Q85734|Q85734_9GAMR Gag protein OS=Murine type C retrovirus G... 35 3.9
tr|B6K124|B6K124_SCHJP Zinc finger protein OS=Schizosaccharomyce... 34 5.1
tr|A6QUL4|A6QUL4_AJECN Predicted protein OS=Ajellomyces capsulat... 34 5.1
tr|B4NKI8|B4NKI8_DROWI GK12762 OS=Drosophila willistoni GN=GK127... 34 6.7
tr|B2EMW5|B2EMW5_9BACT Putative uncharacterized protein OS=bacte... 34 6.8
tr|A7ED82|A7ED82_SCLS1 Predicted protein OS=Sclerotinia scleroti... 34 6.8
tr|B3MGK1|B3MGK1_DROAN GF12317 OS=Drosophila ananassae GN=GF1231... 33 8.7
tr|Q69363|Q69363_FHV1 Immediate early protein OS=Feline herpesvi... 33 8.8
tr|B8CG05|B8CG05_THAPS Predicted protein OS=Thalassiosira pseudo... 33 8.8
tr|A9UPV4|A9UPV4_MONBE Predicted protein OS=Monosiga brevicollis... 33 8.8
tr|A4HFS2|A4HFS2_LEIBR Putative uncharacterized protein OS=Leish... 33 8.8

>tr|Q22WH7|Q22WH7_TETTH HMG box family protein (Fragment)
OS=Tetrahymena thermophila SB210 GN=TTHERM_00155590 PE=4
SV=2
Length = 691

Score = 31.6 bits (70), Expect(2) = 0.078
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3

Query: 339 SNNKIKGRNLDDQMQHPNSKEKNITE-RIARQTPKFAAPSSSVSRSRGKHQQARSQPEST 515
+N+K K RN NSK K+ + + A+ K A S S SR+ K + + +
Sbjct: 416 NNSKAKSRNNSKSKSRNNSKSKSRRDSKQAQSKSKHAGDSKSKSRNNSKAKSRNNSKSKS 475

Query: 516 RGFARSVIASKDNADSFS 569
R ++S S++N+ S S
Sbjct: 476 RNNSKS--KSRNNSKSKS 491



Score = 27.7 bits (60), Expect(2) = 0.078
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2

Query: 89 RRTLKTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSRKQGPGPIFRNKASLKS 247
R + K+ + S KH+ +S KNS++ Q SS + RN + KS
Sbjct: 370 RSSSKSKSKSSKKHSKAKEGSKSRKNSQSKQRSSSKSRNISQQKSRNNSKAKS 422


>tr|Q08BQ6|Q08BQ6_DANRE Zgc:152952 OS=Danio rerio GN=zgc:152952 PE=2
SV=1
Length = 357

Score = 36.6 bits (83), Expect = 1.0
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3

Query: 348 KIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRGFA 527
K + +LD ++Q S E++ T ++++ K + ++R +H QA++ E TR
Sbjct: 116 KERADSLDSRLQQALSAERSCTSQLSQLNRKMIHMEEDLCQARAEHTQAQADLEKTRELC 175

Query: 528 RSVIASKD 551
+ ASKD
Sbjct: 176 VKLDASKD 183


>tr|A4IDS0|A4IDS0_LEIIN Putative uncharacterized protein
OS=Leishmania infantum GN=LinJ36.5530 PE=4 SV=1
Length = 696

Score = 36.6 bits (83), Expect = 1.0
Identities = 23/95 (24%), Positives = 42/95 (44%)
Frame = +3

Query: 294 CQDLVQDSQRHYPVGSNNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRS 473
C+ L +DS+ + GS + IK P + ++TE+ + + A P S +S +
Sbjct: 127 CKVLEEDSELGHAAGSLHHIKVNETSMTSSTPPATSGDVTEKASDSSLMLARPPSKLSGA 186

Query: 474 RGKHQQARSQPESTRGFARSVIASKDNADSFSVPS 578
+ E R + ++ K NAD S+P+
Sbjct: 187 PTREDLDEIIAEEVREWVAKMVGDKYNADVCSMPN 221


>tr|A7S1V9|A7S1V9_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g101427 PE=4 SV=1
Length = 502

Score = 36.6 bits (83), Expect = 1.0
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2

Query: 386 SKFKGKEYHGTYCETDAKICSSLK*CVTKPWKTSASKKSARVDQRLCKVCD---CFKGQC 556
+KFKGK+YH +D + C+ + W+ SA A VD C V C G+C
Sbjct: 368 TKFKGKKYHWIPAISDGQPCALFCKPANQSWRFSAKLADAVVDGTPCAVGSRDICIGGKC 427

Query: 557 RLFQC 571
+ C
Sbjct: 428 QAVGC 432


>tr|B3NTM5|B3NTM5_DROER GG17874 OS=Drosophila erecta GN=GG17874 PE=4
SV=1
Length = 969

Score = 27.7 bits (60), Expect(2) = 1.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2

Query: 101 KTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSR-KQGPGPIFRNKASLKS 247
K++++ S+KH ++ NS + SSS R K G ++K+S S
Sbjct: 83 KSSSSSSSKHRDKDKERDGSSNSHRSSSSSSHRDKDGSSSSSKHKSSSSS 132



Score = 26.9 bits (58), Expect(2) = 1.6
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3

Query: 315 SQRHYPVGSNNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQA 494
S H+ S +K + D+ +S+ K+ + ++ + SSS S S+ KH +
Sbjct: 131 SSGHHKSSSKDKERRDKDKDRSSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSKSKHSSS 190

Query: 495 RSQPEST 515
R S+
Sbjct: 191 RHSSSSS 197


>tr|B8A4S2|B8A4S2_DANRE Novel protein similar to vertebrate testis
specific, 10 (TSGA10, zgc152952) OS=Danio rerio
GN=CH211-149L1.3 PE=4 SV=1
Length = 710

Score = 35.4 bits (80), Expect = 2.3
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +3

Query: 348 KIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRGFA 527
K + +L++++Q S E++ T ++++ K + ++R +H QA++ E TR
Sbjct: 469 KERADSLENRLQQALSAERSCTSQLSQLNRKMIHMEEDLCQARAEHTQAQADLEKTRELC 528

Query: 528 RSVIASKD 551
+ ASKD
Sbjct: 529 VKLDASKD 536


>tr|Q85734|Q85734_9GAMR Gag protein OS=Murine type C retrovirus
GN=gag PE=4 SV=1
Length = 538

Score = 34.7 bits (78), Expect = 3.9
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3

Query: 381 QHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRGFARSV 536
Q P+S + + A TP+ APS VSR RGK R GF SV
Sbjct: 167 QGPSSSDGDGDREEATSTPEIPAPSPMVSRLRGKRDPPRGSFHHLSGFPHSV 218


>tr|B6K124|B6K124_SCHJP Zinc finger protein OS=Schizosaccharomyces
japonicus yFS275 GN=SJAG_02746 PE=4 SV=1
Length = 732

Score = 34.3 bits (77), Expect = 5.1
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3

Query: 291 LCQDLVQDSQRHYPVGSNNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFA--APSSSV 464
+C++ V ++ G++ +K L++ HP S + R P+F+ P S+
Sbjct: 304 VCREKVCLERKFVVFGTDIDLKAHQLEE---HPQSLTSREMREVRRIVPEFSYDVPGSTN 360

Query: 465 SRSRGKHQQARSQP-ESTRGFARSV 536
RSR ++Q + +QP ST A S+
Sbjct: 361 RRSRNQNQSSSTQPISSTEAIAESL 385


>tr|A6QUL4|A6QUL4_AJECN Predicted protein OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_01070 PE=4 SV=1
Length = 262

Score = 34.3 bits (77), Expect = 5.1
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3

Query: 297 QDLVQDSQRHYPVGSNNKIKGRNLDDQ-MQHPNSKEKNITERIARQTPKFAAPSSSVSRS 473
QDL Q++ H P G +N + +++++ MQ P + K TP+ SS +
Sbjct: 83 QDLEQNTGAH-PFGLDNNAENQSVENNNMQRPATNNK---------TPRVPLRSSRSHAT 132

Query: 474 RGKHQQARSQPESTRGFARSVIASKDNADSFSV 572
+ QARSQP R +R + D +SV
Sbjct: 133 VSQVDQARSQPFGVRKQSRRRVGGTDTKFEYSV 165


>tr|B4NKI8|B4NKI8_DROWI GK12762 OS=Drosophila willistoni GN=GK12762
PE=4 SV=1
Length = 555

Score = 33.9 bits (76), Expect = 6.7
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Frame = +3

Query: 297 QDLVQDSQRHYPVGS------NNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSS 458
Q VQ H GS ++ I G N + H NS N+ +++++Q A S
Sbjct: 195 QTYVQHHNHHNYAGSGGSGSGSSSISGSNSSSPIIHSNSSANNMLQQLSQQNVTVTAHHS 254

Query: 459 SVSRSRGKHQQARSQPESTRGFARSV 536
S H Q + Q + + SV
Sbjct: 255 QQQHSNNHHHQQQQQQQQQQQHLSSV 280