BP917363 |
Clone id |
YMU001_000099_H09 |
Library |
YMU01 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000099_H09. |
Accession |
BP917363 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCTAGATTTTTGTCTCAGTGCTAGTGTCGATCTAAGGGTCTAGAGAATTGTGTGAGAGAT CTGTTAAGTTTGTTTCAGGCCAGGACCTAGAAGAACATTAAAGACCACAGCAACACCCAG TGCAAAACATACTCCAGTGAGCAATAAGAAGCAATCTGGGAAAAACTCACGCAACGCACA ATCAAGCTCAAAATCACGCAAGCAAGGACCTGGCCCAATTTTCAGAAATAAGGCAAGTCT GAAAAGTCTCTGTATCATCTGAATACAGCTCAAACTCATTACATTCATCTTTATGTCAGG ACTTAGTGCAGGATAGTCAAAGGCACTATCCAGTAGGTTCGAATAACAAGATAAAGGGTC GAAATTTGGATGACCAAATGCAACATCCAAATTCAAAGGAAAAGAATATCACGGAACGTA TTGCGAGACAGACGCCAAAATTTGCAGCTCCCTCAAGTAGTGTGTCACGAAGCCGTGGAA AACATCAGCAAGCAAGAAGTCAGCCAGAGTCGACCAGAGGCTTTGCAAGGTCTGTGATTG CTTCAAAGGACAATGCAGACTCTTTCAGTGTCCCTTCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54JC7 |
Definition |
sp|Q54JC7|Y1197_DICDI Probable serine/threonine-protein kinase DDB_G0288147 OS=Dictyostelium discoideum |
Align length |
54 |
Score (bit) |
33.5 |
E-value |
0.79 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q22WH7 |
Definition |
tr|Q22WH7|Q22WH7_TETTH HMG box family protein (Fragment) OS=Tetrahymena thermophila SB210 |
Align length |
78 |
Score (bit) |
31.6 |
E-value |
0.078 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917363|Adiantum capillus-veneris mRNA, clone: YMU001_000099_H09. (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q22WH7|Q22WH7_TETTH HMG box family protein (Fragment) OS=Tetr... 32 0.078 tr|Q08BQ6|Q08BQ6_DANRE Zgc:152952 OS=Danio rerio GN=zgc:152952 P... 37 1.0 tr|A4IDS0|A4IDS0_LEIIN Putative uncharacterized protein OS=Leish... 37 1.0 tr|A7S1V9|A7S1V9_NEMVE Predicted protein OS=Nematostella vectens... 37 1.0 tr|B3NTM5|B3NTM5_DROER GG17874 OS=Drosophila erecta GN=GG17874 P... 28 1.6 tr|B8A4S2|B8A4S2_DANRE Novel protein similar to vertebrate testi... 35 2.3 tr|Q85734|Q85734_9GAMR Gag protein OS=Murine type C retrovirus G... 35 3.9 tr|B6K124|B6K124_SCHJP Zinc finger protein OS=Schizosaccharomyce... 34 5.1 tr|A6QUL4|A6QUL4_AJECN Predicted protein OS=Ajellomyces capsulat... 34 5.1 tr|B4NKI8|B4NKI8_DROWI GK12762 OS=Drosophila willistoni GN=GK127... 34 6.7 tr|B2EMW5|B2EMW5_9BACT Putative uncharacterized protein OS=bacte... 34 6.8 tr|A7ED82|A7ED82_SCLS1 Predicted protein OS=Sclerotinia scleroti... 34 6.8 tr|B3MGK1|B3MGK1_DROAN GF12317 OS=Drosophila ananassae GN=GF1231... 33 8.7 tr|Q69363|Q69363_FHV1 Immediate early protein OS=Feline herpesvi... 33 8.8 tr|B8CG05|B8CG05_THAPS Predicted protein OS=Thalassiosira pseudo... 33 8.8 tr|A9UPV4|A9UPV4_MONBE Predicted protein OS=Monosiga brevicollis... 33 8.8 tr|A4HFS2|A4HFS2_LEIBR Putative uncharacterized protein OS=Leish... 33 8.8
>tr|Q22WH7|Q22WH7_TETTH HMG box family protein (Fragment) OS=Tetrahymena thermophila SB210 GN=TTHERM_00155590 PE=4 SV=2 Length = 691
Score = 31.6 bits (70), Expect(2) = 0.078 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +3
Query: 339 SNNKIKGRNLDDQMQHPNSKEKNITE-RIARQTPKFAAPSSSVSRSRGKHQQARSQPEST 515 +N+K K RN NSK K+ + + A+ K A S S SR+ K + + + Sbjct: 416 NNSKAKSRNNSKSKSRNNSKSKSRRDSKQAQSKSKHAGDSKSKSRNNSKAKSRNNSKSKS 475
Query: 516 RGFARSVIASKDNADSFS 569 R ++S S++N+ S S Sbjct: 476 RNNSKS--KSRNNSKSKS 491
Score = 27.7 bits (60), Expect(2) = 0.078 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2
Query: 89 RRTLKTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSRKQGPGPIFRNKASLKS 247 R + K+ + S KH+ +S KNS++ Q SS + RN + KS Sbjct: 370 RSSSKSKSKSSKKHSKAKEGSKSRKNSQSKQRSSSKSRNISQQKSRNNSKAKS 422
>tr|Q08BQ6|Q08BQ6_DANRE Zgc:152952 OS=Danio rerio GN=zgc:152952 PE=2 SV=1 Length = 357
Score = 36.6 bits (83), Expect = 1.0 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = +3
Query: 348 KIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRGFA 527 K + +LD ++Q S E++ T ++++ K + ++R +H QA++ E TR Sbjct: 116 KERADSLDSRLQQALSAERSCTSQLSQLNRKMIHMEEDLCQARAEHTQAQADLEKTRELC 175
Query: 528 RSVIASKD 551 + ASKD Sbjct: 176 VKLDASKD 183
>tr|A4IDS0|A4IDS0_LEIIN Putative uncharacterized protein OS=Leishmania infantum GN=LinJ36.5530 PE=4 SV=1 Length = 696
Score = 36.6 bits (83), Expect = 1.0 Identities = 23/95 (24%), Positives = 42/95 (44%) Frame = +3
Query: 294 CQDLVQDSQRHYPVGSNNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRS 473 C+ L +DS+ + GS + IK P + ++TE+ + + A P S +S + Sbjct: 127 CKVLEEDSELGHAAGSLHHIKVNETSMTSSTPPATSGDVTEKASDSSLMLARPPSKLSGA 186
Query: 474 RGKHQQARSQPESTRGFARSVIASKDNADSFSVPS 578 + E R + ++ K NAD S+P+ Sbjct: 187 PTREDLDEIIAEEVREWVAKMVGDKYNADVCSMPN 221
>tr|A7S1V9|A7S1V9_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g101427 PE=4 SV=1 Length = 502
Score = 36.6 bits (83), Expect = 1.0 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = +2
Query: 386 SKFKGKEYHGTYCETDAKICSSLK*CVTKPWKTSASKKSARVDQRLCKVCD---CFKGQC 556 +KFKGK+YH +D + C+ + W+ SA A VD C V C G+C Sbjct: 368 TKFKGKKYHWIPAISDGQPCALFCKPANQSWRFSAKLADAVVDGTPCAVGSRDICIGGKC 427
Query: 557 RLFQC 571 + C Sbjct: 428 QAVGC 432
>tr|B3NTM5|B3NTM5_DROER GG17874 OS=Drosophila erecta GN=GG17874 PE=4 SV=1 Length = 969
Score = 27.7 bits (60), Expect(2) = 1.6 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +2
Query: 101 KTTATPSAKHTPVSNKKQSGKNSRNAQSSSKSR-KQGPGPIFRNKASLKS 247 K++++ S+KH ++ NS + SSS R K G ++K+S S Sbjct: 83 KSSSSSSSKHRDKDKERDGSSNSHRSSSSSSHRDKDGSSSSSKHKSSSSS 132
Score = 26.9 bits (58), Expect(2) = 1.6 Identities = 16/67 (23%), Positives = 30/67 (44%) Frame = +3
Query: 315 SQRHYPVGSNNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQA 494 S H+ S +K + D+ +S+ K+ + ++ + SSS S S+ KH + Sbjct: 131 SSGHHKSSSKDKERRDKDKDRSSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSKSKHSSS 190
Query: 495 RSQPEST 515 R S+ Sbjct: 191 RHSSSSS 197
>tr|B8A4S2|B8A4S2_DANRE Novel protein similar to vertebrate testis specific, 10 (TSGA10, zgc152952) OS=Danio rerio GN=CH211-149L1.3 PE=4 SV=1 Length = 710
Score = 35.4 bits (80), Expect = 2.3 Identities = 18/68 (26%), Positives = 37/68 (54%) Frame = +3
Query: 348 KIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRGFA 527 K + +L++++Q S E++ T ++++ K + ++R +H QA++ E TR Sbjct: 469 KERADSLENRLQQALSAERSCTSQLSQLNRKMIHMEEDLCQARAEHTQAQADLEKTRELC 528
Query: 528 RSVIASKD 551 + ASKD Sbjct: 529 VKLDASKD 536
>tr|Q85734|Q85734_9GAMR Gag protein OS=Murine type C retrovirus GN=gag PE=4 SV=1 Length = 538
Score = 34.7 bits (78), Expect = 3.9 Identities = 20/52 (38%), Positives = 24/52 (46%) Frame = +3
Query: 381 QHPNSKEKNITERIARQTPKFAAPSSSVSRSRGKHQQARSQPESTRGFARSV 536 Q P+S + + A TP+ APS VSR RGK R GF SV Sbjct: 167 QGPSSSDGDGDREEATSTPEIPAPSPMVSRLRGKRDPPRGSFHHLSGFPHSV 218
>tr|B6K124|B6K124_SCHJP Zinc finger protein OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_02746 PE=4 SV=1 Length = 732
Score = 34.3 bits (77), Expect = 5.1 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +3
Query: 291 LCQDLVQDSQRHYPVGSNNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFA--APSSSV 464 +C++ V ++ G++ +K L++ HP S + R P+F+ P S+ Sbjct: 304 VCREKVCLERKFVVFGTDIDLKAHQLEE---HPQSLTSREMREVRRIVPEFSYDVPGSTN 360
Query: 465 SRSRGKHQQARSQP-ESTRGFARSV 536 RSR ++Q + +QP ST A S+ Sbjct: 361 RRSRNQNQSSSTQPISSTEAIAESL 385
>tr|A6QUL4|A6QUL4_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_01070 PE=4 SV=1 Length = 262
Score = 34.3 bits (77), Expect = 5.1 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Frame = +3
Query: 297 QDLVQDSQRHYPVGSNNKIKGRNLDDQ-MQHPNSKEKNITERIARQTPKFAAPSSSVSRS 473 QDL Q++ H P G +N + +++++ MQ P + K TP+ SS + Sbjct: 83 QDLEQNTGAH-PFGLDNNAENQSVENNNMQRPATNNK---------TPRVPLRSSRSHAT 132
Query: 474 RGKHQQARSQPESTRGFARSVIASKDNADSFSV 572 + QARSQP R +R + D +SV Sbjct: 133 VSQVDQARSQPFGVRKQSRRRVGGTDTKFEYSV 165
>tr|B4NKI8|B4NKI8_DROWI GK12762 OS=Drosophila willistoni GN=GK12762 PE=4 SV=1 Length = 555
Score = 33.9 bits (76), Expect = 6.7 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 6/86 (6%) Frame = +3
Query: 297 QDLVQDSQRHYPVGS------NNKIKGRNLDDQMQHPNSKEKNITERIARQTPKFAAPSS 458 Q VQ H GS ++ I G N + H NS N+ +++++Q A S Sbjct: 195 QTYVQHHNHHNYAGSGGSGSGSSSISGSNSSSPIIHSNSSANNMLQQLSQQNVTVTAHHS 254
Query: 459 SVSRSRGKHQQARSQPESTRGFARSV 536 S H Q + Q + + SV Sbjct: 255 QQQHSNNHHHQQQQQQQQQQQHLSSV 280
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