BP917364 |
Clone id |
YMU001_000099_H10 |
Library |
YMU01 |
Length |
498 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000099_H10. |
Accession |
BP917364 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAAAATATGGCATCAAGCAAGGTATAGAGCATTATACTTGCATGATTGATCTTTTTGGAC GTACAGGCCATCTTGATAAGGGAGTCAAAATGATCCAGGTGCTACCATCACATGATGACT CTGCAGTATGGTCTGCCCTGTTGGATGCTTGCATTAAGTGGGGAGATGTGAATGTTGGGA AGTGGGCCTTAAAAAGGGCAGTCCTAGTAGATGAGAGTGATGCGGCAGCTTATGTCCTGA TGGCCAATTTGCAAGGGTCTACTGATTTGCCAGTAGATGCGATGTAACTGATGCCATGTT AATGAAATATCACGTGGTCTATTCGAGGGCGTGGGTGTTGCCCTGTGTGAGTGAAATTTT ATGATGGGGACCCAATCGTATTCAGAGCATTTGCACTCAGTTTTAGCTTCACATGCCAAG GCATGATCAACCCGCATCAGAATTTATTATGCTTTTCATGTCTCAGATGGGCAGATTGTA TAATTATGCAGATGTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8S9M4 |
Definition |
sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana |
Align length |
86 |
Score (bit) |
77.4 |
E-value |
3.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94I34 |
Definition |
tr|Q94I34|Q94I34_ORYSJ Putative selenium-binding protein-like (Putative uncharacterized protein) (Pentatricopeptide, putative) OS=Oryza sativa subsp. japonica |
Align length |
89 |
Score (bit) |
84.0 |
E-value |
4.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917364|Adiantum capillus-veneris mRNA, clone: YMU001_000099_H10. (498 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q94I34|Q94I34_ORYSJ Putative selenium-binding protein-like (P... 84 4e-15 tr|A2Q4J6|A2Q4J6_MEDTR Tetratricopeptide-like helical OS=Medicag... 83 8e-15 tr|A7PJW3|A7PJW3_VITVI Chromosome chr12 scaffold_18, whole genom... 81 2e-14 tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome... 80 4e-14 tr|A7QUQ9|A7QUQ9_VITVI Chromosome chr1 scaffold_180, whole genom... 80 5e-14 tr|B4FZF5|B4FZF5_MAIZE Putative uncharacterized protein OS=Zea m... 80 7e-14 tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subs... 79 2e-13 tr|B8B9V6|B8B9V6_ORYSI Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|A7P9K4|A7P9K4_VITVI Chromosome chr3 scaffold_8, whole genome ... 79 2e-13 tr|A3BS46|A3BS46_ORYSJ Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|Q6DT52|Q6DT52_ARALP AT1G74600 (Fragment) OS=Arabidopsis lyrat... 78 2e-13 tr|Q2QNV4|Q2QNV4_ORYSJ Pentatricopeptide, putative, expressed OS... 78 2e-13 tr|Q0IMR5|Q0IMR5_ORYSJ Os12g0552300 protein OS=Oryza sativa subs... 78 2e-13 tr|A5AX00|A5AX00_VITVI Putative uncharacterized protein OS=Vitis... 78 2e-13 tr|A5AMS4|A5AMS4_VITVI Putative uncharacterized protein OS=Vitis... 78 2e-13 tr|A3CIA3|A3CIA3_ORYSJ Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|Q10K51|Q10K51_ORYSJ Pentatricopeptide, putative (Putative unc... 78 3e-13 tr|Q0DC25|Q0DC25_ORYSJ Os06g0493800 protein OS=Oryza sativa subs... 78 3e-13 tr|A7QF00|A7QF00_VITVI Chromosome chr16 scaffold_86, whole genom... 78 3e-13 tr|A2YD70|A2YD70_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|Q2QZT2|Q2QZT2_ORYSJ Os11g0673000 protein OS=Oryza sativa subs... 77 3e-13 tr|B8BMF2|B8BMF2_ORYSI Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|A3BAH6|A3BAH6_ORYSJ Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|A7QI90|A7QI90_VITVI Chromosome chr17 scaffold_101, whole geno... 77 5e-13 tr|A7QFC9|A7QFC9_VITVI Chromosome undetermined scaffold_87, whol... 77 5e-13 tr|A5AYH4|A5AYH4_VITVI Putative uncharacterized protein OS=Vitis... 77 5e-13 tr|A2Q4A7|A2Q4A7_MEDTR Tetratricopeptide-like helical OS=Medicag... 77 5e-13 tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing... 77 6e-13 tr|Q6ASQ9|Q6ASQ9_ORYSJ Os05g0147600 protein OS=Oryza sativa subs... 77 6e-13 tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome... 77 6e-13
>tr|Q94I34|Q94I34_ORYSJ Putative selenium-binding protein-like (Putative uncharacterized protein) (Pentatricopeptide, putative) OS=Oryza sativa subsp. japonica GN=OSJNBa0050N08.17 PE=4 SV=1 Length = 651
Score = 84.0 bits (206), Expect = 4e-15 Identities = 34/89 (38%), Positives = 59/89 (66%) Frame = +3
Query: 3 KYGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGK 182 KY +++ ++HY+CMIDL GR GHLD+ +++ +P D+ VW A+ AC G++++G+ Sbjct: 490 KYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGE 549
Query: 183 WALKRAVLVDESDAAAYVLMANLQGSTDL 269 A + V +D SD+ YVL+AN+ ++ Sbjct: 550 KAAMKLVEIDPSDSGIYVLLANMYAEANM 578
>tr|A2Q4J6|A2Q4J6_MEDTR Tetratricopeptide-like helical OS=Medicago truncatula GN=MtrDRAFT_AC157502g25v2 PE=4 SV=1 Length = 1083
Score = 82.8 bits (203), Expect = 8e-15 Identities = 34/88 (38%), Positives = 58/88 (65%) Frame = +3
Query: 3 KYGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGK 182 +YGIK ++HY CM+DL GR G+L+K ++++ +P D+++W ALL AC +G+ +G Sbjct: 556 EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGT 615
Query: 183 WALKRAVLVDESDAAAYVLMANLQGSTD 266 A R + VD + YVL++N+ +T+ Sbjct: 616 LASDRLLEVDSENVGYYVLLSNIYANTE 643
Score = 33.5 bits (75), Expect = 5.7 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +3
Query: 36 TCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALL 143 TC+IDL+G+ G L+ + + +P D S W+A++ Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAII 499
>tr|A7PJW3|A7PJW3_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018905001 PE=4 SV=1 Length = 497
Score = 81.3 bits (199), Expect = 2e-14 Identities = 37/93 (39%), Positives = 62/93 (66%) Frame = +3
Query: 6 YGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGKW 185 Y I+ I+HY+CM+D GR G L++ ++I+ +P + D+ +WS+LL AC K G+V + K Sbjct: 352 YKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKR 411
Query: 186 ALKRAVLVDESDAAAYVLMANLQGSTDLPVDAM 284 A K V +D +D+ YVL++N+ ++D +AM Sbjct: 412 AAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAM 444
>tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038549001 PE=4 SV=1 Length = 900
Score = 80.5 bits (197), Expect = 4e-14 Identities = 35/83 (42%), Positives = 53/83 (63%) Frame = +3
Query: 3 KYGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGK 182 +YGIK ++HY CM+DL GR G L+ I+ +P H D+++W ALL AC G++ +GK Sbjct: 669 EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGK 728
Query: 183 WALKRAVLVDESDAAAYVLMANL 251 +A R VD + YVL++N+ Sbjct: 729 FASDRLFEVDSENVGYYVLLSNI 751
>tr|A7QUQ9|A7QUQ9_VITVI Chromosome chr1 scaffold_180, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006945001 PE=4 SV=1 Length = 828
Score = 80.1 bits (196), Expect = 5e-14 Identities = 36/82 (43%), Positives = 54/82 (65%) Frame = +3
Query: 6 YGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGKW 185 +GI+ IEHYTCM+ L GR GHLDK VK+I +P VW ALL AC+ D+ +G+ Sbjct: 587 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 646
Query: 186 ALKRAVLVDESDAAAYVLMANL 251 + +R + ++ D A +VL++N+ Sbjct: 647 SAQRVLEMEPQDKATHVLLSNM 668
>tr|B4FZF5|B4FZF5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 570
Score = 79.7 bits (195), Expect = 7e-14 Identities = 36/87 (41%), Positives = 54/87 (62%) Frame = +3
Query: 6 YGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGKW 185 Y +K +EHY CM+DL GR GHL+K V +I+ +P D VW ALL AC G+V +GK Sbjct: 408 YNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQ 467
Query: 186 ALKRAVLVDESDAAAYVLMANLQGSTD 266 +K+ + ++ +VL++NL T+ Sbjct: 468 VIKQLLELEGISGGLFVLISNLLYETN 494
>tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0062G05.28 PE=2 SV=1 Length = 819
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/91 (39%), Positives = 58/91 (63%) Frame = +3
Query: 6 YGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGKW 185 Y I+ GIEHY +++LFGR+G L + I+ +P +AVW +LL AC +G+ +G++ Sbjct: 655 YDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRY 714
Query: 186 ALKRAVLVDESDAAAYVLMANLQGSTDLPVD 278 A + A+L D +D+ YVL++N+ S L D Sbjct: 715 AAEMALLADPTDSGPYVLLSNIYASKGLWAD 745
>tr|B8B9V6|B8B9V6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28874 PE=4 SV=1 Length = 434
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/91 (39%), Positives = 58/91 (63%) Frame = +3
Query: 6 YGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGKW 185 Y I+ GIEHY +++LFGR+G L + I+ +P +AVW +LL AC +G+ +G++ Sbjct: 116 YDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRY 175
Query: 186 ALKRAVLVDESDAAAYVLMANLQGSTDLPVD 278 A + A+L D +D+ YVL++N+ S L D Sbjct: 176 AAEMALLADPTDSGPYVLLSNIYASKGLWAD 206
>tr|A7P9K4|A7P9K4_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036603001 PE=4 SV=1 Length = 704
Score = 78.6 bits (192), Expect = 2e-13 Identities = 34/83 (40%), Positives = 53/83 (63%) Frame = +3
Query: 3 KYGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGK 182 +YGIK ++HY CM+DL GR G+L+ I+ +P D+++W ALL AC G++ +GK Sbjct: 462 EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGK 521
Query: 183 WALKRAVLVDESDAAAYVLMANL 251 +A R VD + YVL++N+ Sbjct: 522 FASDRLFEVDSKNVGYYVLLSNI 544
>tr|A3BS46|A3BS46_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025868 PE=4 SV=1 Length = 1010
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/91 (39%), Positives = 58/91 (63%) Frame = +3
Query: 6 YGIKQGIEHYTCMIDLFGRTGHLDKGVKMIQVLPSHDDSAVWSALLDACIKWGDVNVGKW 185 Y I+ GIEHY +++LFGR+G L + I+ +P +AVW +LL AC +G+ +G++ Sbjct: 846 YDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRY 905
Query: 186 ALKRAVLVDESDAAAYVLMANLQGSTDLPVD 278 A + A+L D +D+ YVL++N+ S L D Sbjct: 906 AAEMALLADPTDSGPYVLLSNIYASKGLWAD 936
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