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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917365
Clone id YMU001_000099_H11
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTACACTAATCTGATCTGATACTATAAAAAGAGTTGATAATTCTACAATGACATCAAA
GCCAGGTTCTCCATTTCTGTTGAGCTATATTCAGATGGTAACATTATGGTATACAAGTCA
ATGATCTCGAGAATCAAGCACAAAAAACAAATGTGCTCTTTGCCTGCATAGGTCAATGTG
ATGAAGGCTGAGAATGTTGAGCCATACCCATGCGTGGGAAAATCATGGGCAAAGCATTGT
CCCTGCCGTAGAATATCTGATGCTATTGTGAATGCCATGACCCATTCACTGGCTCTCAGC
TGCATCAAACGCTCTTCACAGATGATCGCTATTCACCATGCCAAACTTATCTTCCTCCCT
CCTCAGCGTGATGATGCACCTCATCCTGACTTTCAAGCGGCATGTATTGCGCCATAATAG
CCTTTACCTCCGAGTCCATGTACGCCCTCAGNCTGTACTTATACACAACATAGGCCCCAA
TGCCAGCAGCGCACAATCCAACCAAAA
■■Homology search results ■■ -
sp_hit_id Q56ZQ3
Definition sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana
Align length 48
Score (bit) 65.9
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917365|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H11.
         (507 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis ...    66   1e-10
sp|O80977|VSR3_ARATH Vacuolar-sorting receptor 3 OS=Arabidopsis ...    65   1e-10
sp|O22925|VSR2_ARATH Vacuolar-sorting receptor 2 OS=Arabidopsis ...    61   3e-09
sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1 OS=Pisum sativum ...    59   1e-08
sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis ...    59   1e-08
sp|Q9FYH7|VSR6_ARATH Vacuolar-sorting receptor 6 OS=Arabidopsis ...    57   6e-08
sp|Q8L7E3|VSR7_ARATH Vacuolar-sorting receptor 7 OS=Arabidopsis ...    54   5e-07
sp|O64758|VSR5_ARATH Vacuolar-sorting receptor 5 OS=Arabidopsis ...    52   1e-06
sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 ...    30   5.0  
sp|A6L9D2|OXAA_PARD8 Inner membrane protein oxaA OS=Parabacteroi...    30   8.4  

>sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis
           thaliana GN=VSR4 PE=2 SV=2
          Length = 628

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = -3

Query: 502 VGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
           +GL AAG  AY+VYKY LR YMDSE++AIMAQYMPL+SQ EV +H  +
Sbjct: 580 LGLAAAG--AYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEVPNHTND 625


>sp|O80977|VSR3_ARATH Vacuolar-sorting receptor 3 OS=Arabidopsis
           thaliana GN=VSR3 PE=2 SV=1
          Length = 628

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = -3

Query: 502 VGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
           +GL AAG  AY+VYKY LR YMDSE++AIMAQYMPL+SQ E+ +H  +
Sbjct: 580 LGLAAAG--AYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEIPNHVND 625


>sp|O22925|VSR2_ARATH Vacuolar-sorting receptor 2 OS=Arabidopsis
           thaliana GN=VSR2 PE=2 SV=1
          Length = 625

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLES 389
           ++GL AA +GAY VYKY +R YMDSE++AIMAQYMPL++
Sbjct: 575 IMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDN 613


>sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1 OS=Pisum sativum
           GN=BP80 PE=1 SV=1
          Length = 623

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
           L+ L     G ++VYKY +R YMDSE++AIMAQYMPL+SQ+E  +H
Sbjct: 572 LIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQEEGPNH 617


>sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis
           thaliana GN=VSR1 PE=1 SV=2
          Length = 623

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQ 386
           ++G+  AG+  Y VYKY +R+YMD+E++ IMAQYMPLESQ
Sbjct: 573 IIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQ 612


>sp|Q9FYH7|VSR6_ARATH Vacuolar-sorting receptor 6 OS=Arabidopsis
           thaliana GN=VSR6 PE=2 SV=2
          Length = 622

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQD 383
           L  + +  +G YV YKY LR+YMDSE+ AIM+QYMPLESQ+
Sbjct: 562 LAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQN 602


>sp|Q8L7E3|VSR7_ARATH Vacuolar-sorting receptor 7 OS=Arabidopsis
           thaliana GN=VSR7 PE=2 SV=2
          Length = 625

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 496 LCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQ 386
           +  AG+  Y+ YKY  R+YMDSE+  IM+QYMPLESQ
Sbjct: 575 VAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQ 611


>sp|O64758|VSR5_ARATH Vacuolar-sorting receptor 5 OS=Arabidopsis
           thaliana GN=VSR5 PE=2 SV=1
          Length = 618

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQ 386
           L  +    +GAY+ YKY L++YMDSE+ +IM+QY+PL+SQ
Sbjct: 571 LTAIAGISLGAYIFYKYHLQSYMDSEIVSIMSQYIPLDSQ 610


>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11
            OS=Homo sapiens GN=DDX11 PE=2 SV=1
          Length = 970

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
 Frame = +1

Query: 184  KAENVEPYPCVGKS--WAKHCPCRRISDAIV---------NAMTHSLALSC 303
            +A  ++P PC G+S  W +HC C  +S   V          A   +L LSC
Sbjct: 871  QAAGLDPSPCGGQSYLWPRHCCCAEVSPGEVGLFLMGNHTTAWRRALPLSC 921


>sp|A6L9D2|OXAA_PARD8 Inner membrane protein oxaA OS=Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
           GN=oxaA PE=3 SV=1
          Length = 633

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = -2

Query: 278 MAFTIASDILRQGQCFAHDFPTHGYGSTFSAFITLT--YAGKEHICFLCLILEIIDLYTI 105
           M F  A ++  Q   +AHD  T+    +++ +I +   Y G  HI   CL++ I +++  
Sbjct: 467 MFFPSAIELRHQSFLWAHDLSTYDAIFSWNKYIPIITPYFGN-HISLFCLLMTITNIFYT 525

Query: 104 MLPSEYSSTEMENLALMSL*NYQL 33
               E ++T  + +  M    Y +
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMM 549
tr_hit_id B8LPV3
Definition tr|B8LPV3|B8LPV3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 46
Score (bit) 76.6
E-value 6.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917365|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H11.
         (507 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LPV3|B8LPV3_PICSI Putative uncharacterized protein OS=Picea...    77   6e-13
tr|A9U2S8|A9U2S8_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A7QL63|A7QL63_VITVI Chromosome chr3 scaffold_117, whole genom...    74   3e-12
tr|Q9SDR8|Q9SDR8_PRUDU Vacuolar sorting receptor protein (Fragme...    72   1e-11
tr|A9RCZ4|A9RCZ4_PHYPA Predicted protein OS=Physcomitrella paten...    72   2e-11
tr|A7QFP2|A7QFP2_VITVI Chromosome chr8 scaffold_88, whole genome...    71   3e-11
tr|A5C8C9|A5C8C9_VITVI Putative uncharacterized protein OS=Vitis...    71   3e-11
tr|A9TGU2|A9TGU2_PHYPA Predicted protein OS=Physcomitrella paten...    70   8e-11
tr|Q7XHX6|Q7XHX6_ORYSJ Os07g0680000 protein OS=Oryza sativa subs...    69   1e-10
tr|B8B629|B8B629_ORYSI Putative uncharacterized protein OS=Oryza...    69   1e-10
tr|A9S0J9|A9S0J9_PHYPA Predicted protein OS=Physcomitrella paten...    69   1e-10
tr|Q10LT8|Q10LT8_ORYSJ Os03g0335300 protein OS=Oryza sativa subs...    69   2e-10
tr|B8ANZ8|B8ANZ8_ORYSI Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|A3AHP2|A3AHP2_ORYSJ Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|Q9AWB4|Q9AWB4_PHYPA EGF receptor-like protein (Fragment) OS=P...    68   3e-10
tr|A9TBT9|A9TBT9_PHYPA Predicted protein OS=Physcomitrella paten...    68   3e-10
tr|B6U0J6|B6U0J6_MAIZE Putative uncharacterized protein OS=Zea m...    67   4e-10
tr|Q94HD5|Q94HD5_ORYSA Putative vacuolar sorting receptor protei...    67   6e-10
tr|Q8H8K1|Q8H8K1_ORYSJ Putative vacuolar sorting receptor protei...    67   6e-10
tr|Q339K4|Q339K4_ORYSJ Os10g0346600 protein OS=Oryza sativa subs...    67   6e-10
tr|A2Z686|A2Z686_ORYSI Putative uncharacterized protein OS=Oryza...    67   6e-10
tr|Q9LLR3|Q9LLR3_WHEAT Vacuolar targeting receptor bp-80 OS=Trit...    66   1e-09
tr|P93027|P93027_ARATH Vacuolar sorting receptor homolog OS=Arab...    66   1e-09
tr|P93645|P93645_MAIZE Vacuolar sorting receptor homolog (Fragme...    65   1e-09
tr|B6U4K3|B6U4K3_MAIZE Vacuolar sorting receptor 3 OS=Zea mays P...    65   1e-09
tr|B4FAD8|B4FAD8_MAIZE Putative uncharacterized protein OS=Zea m...    65   1e-09
tr|A9S0L8|A9S0L8_PHYPA Predicted protein OS=Physcomitrella paten...    65   1e-09
tr|Q2QYK3|Q2QYK3_ORYSJ Os12g0116000 protein OS=Oryza sativa subs...    65   2e-09
tr|B8BNX3|B8BNX3_ORYSI Putative uncharacterized protein OS=Oryza...    65   2e-09
tr|B8BIR1|B8BIR1_ORYSI Putative uncharacterized protein OS=Oryza...    65   2e-09

>tr|B8LPV3|B8LPV3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 635

 Score = 76.6 bits (187), Expect = 6e-13
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
           L+GL AAG+GAYVVYKY LR+YMDSE++AIMAQYMPL+SQ E+ +H
Sbjct: 584 LLGLAAAGVGAYVVYKYRLRSYMDSEIRAIMAQYMPLDSQGEIPNH 629


>tr|A9U2S8|A9U2S8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_100917 PE=4 SV=1
          Length = 620

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEEGGR 350
           L GL   G+G+YVVYKY LR YMDSE++AIMAQYMPL+SQ EV +H+  G R
Sbjct: 567 LAGLSVLGLGSYVVYKYRLRTYMDSEIRAIMAQYMPLDSQGEVQNHSHNGVR 618


>tr|A7QL63|A7QL63_VITVI Chromosome chr3 scaffold_117, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001461001
           PE=4 SV=1
          Length = 631

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
           L+GL  AG GAY+VYKY +R+YMDSE++AIMAQYMPL+SQ EV +H  E
Sbjct: 580 LIGLAMAGTGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQTEVPNHVSE 628


>tr|Q9SDR8|Q9SDR8_PRUDU Vacuolar sorting receptor protein (Fragment)
           OS=Prunus dulcis PE=2 SV=1
          Length = 159

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
           L+GL  AG GAY+VYKY LR+YMDSE++AIMAQYMPL+SQ EV +H  +
Sbjct: 108 LIGLAMAGGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQAEVPNHVND 156


>tr|A9RCZ4|A9RCZ4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_111533 PE=4 SV=1
          Length = 636

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
           L G+   G+G+YVVYKY LR YMDSE++AIMAQYMPL+SQ E+ +H+ +
Sbjct: 585 LAGISVLGLGSYVVYKYRLRTYMDSEIRAIMAQYMPLDSQSEIQNHSRD 633


>tr|A7QFP2|A7QFP2_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037498001
           PE=4 SV=1
          Length = 624

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEEG 356
           ++GL AAG+G Y +YKY +R YMDSE++AIMAQYMPL++Q E+ +H   G
Sbjct: 573 ILGLAAAGVGGYALYKYRIRRYMDSEIRAIMAQYMPLDNQGEIPNHVPHG 622


>tr|A5C8C9|A5C8C9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015390 PE=4 SV=1
          Length = 625

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEEG 356
           ++GL AAG+G Y +YKY +R YMDSE++AIMAQYMPL++Q E+ +H   G
Sbjct: 574 ILGLAAAGVGGYALYKYRIRRYMDSEIRAIMAQYMPLDNQGEIPNHVPHG 623


>tr|A9TGU2|A9TGU2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_145371 PE=4 SV=1
          Length = 626

 Score = 69.7 bits (169), Expect = 8e-11
 Identities = 30/48 (62%), Positives = 39/48 (81%)
 Frame = -3

Query: 502 VGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
           +G+ + G+  YVVYKY LR+YMDSE++AIMAQYMPL+S  EV+HH  E
Sbjct: 577 LGVASLGVVGYVVYKYRLRSYMDSEIRAIMAQYMPLDSSSEVNHHLTE 624


>tr|Q7XHX6|Q7XHX6_ORYSJ Os07g0680000 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0008J01.6 PE=2 SV=1
          Length = 626

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -3

Query: 499 GLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
           GL  AGIGAY VYKY LR+YMDSE++AIMAQYMPLE+Q+  + H
Sbjct: 575 GLALAGIGAYAVYKYRLRSYMDSEIRAIMAQYMPLENQETPNQH 618


>tr|B8B629|B8B629_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27347 PE=4 SV=1
          Length = 626

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -3

Query: 499 GLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
           GL  AGIGAY VYKY LR+YMDSE++AIMAQYMPLE+Q+  + H
Sbjct: 575 GLALAGIGAYAVYKYRLRSYMDSEIRAIMAQYMPLENQETPNQH 618