BP917365
Clone id YMU001_000099_H11
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTACACTAATCTGATCTGATACTATAAAAAGAGTTGATAATTCTACAATGACATCAAA
GCCAGGTTCTCCATTTCTGTTGAGCTATATTCAGATGGTAACATTATGGTATACAAGTCA
ATGATCTCGAGAATCAAGCACAAAAAACAAATGTGCTCTTTGCCTGCATAGGTCAATGTG
ATGAAGGCTGAGAATGTTGAGCCATACCCATGCGTGGGAAAATCATGGGCAAAGCATTGT
CCCTGCCGTAGAATATCTGATGCTATTGTGAATGCCATGACCCATTCACTGGCTCTCAGC
TGCATCAAACGCTCTTCACAGATGATCGCTATTCACCATGCCAAACTTATCTTCCTCCCT
CCTCAGCGTGATGATGCACCTCATCCTGACTTTCAAGCGGCATGTATTGCGCCATAATAG
CCTTTACCTCCGAGTCCATGTACGCCCTCAGNCTGTACTTATACACAACATAGGCCCCAA
TGCCAGCAGCGCACAATCCAACCAAAA
■■Homology search results ■■ -
sp_hit_id Q56ZQ3
Definition sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana
Align length 48
Score (bit) 65.9
E-value 1.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917365|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H11.
(507 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis ... 66 1e-10
sp|O80977|VSR3_ARATH Vacuolar-sorting receptor 3 OS=Arabidopsis ... 65 1e-10
sp|O22925|VSR2_ARATH Vacuolar-sorting receptor 2 OS=Arabidopsis ... 61 3e-09
sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1 OS=Pisum sativum ... 59 1e-08
sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis ... 59 1e-08
sp|Q9FYH7|VSR6_ARATH Vacuolar-sorting receptor 6 OS=Arabidopsis ... 57 6e-08
sp|Q8L7E3|VSR7_ARATH Vacuolar-sorting receptor 7 OS=Arabidopsis ... 54 5e-07
sp|O64758|VSR5_ARATH Vacuolar-sorting receptor 5 OS=Arabidopsis ... 52 1e-06
sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 ... 30 5.0
sp|A6L9D2|OXAA_PARD8 Inner membrane protein oxaA OS=Parabacteroi... 30 8.4

>sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis
thaliana GN=VSR4 PE=2 SV=2
Length = 628

Score = 65.9 bits (159), Expect = 1e-10
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = -3

Query: 502 VGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
+GL AAG AY+VYKY LR YMDSE++AIMAQYMPL+SQ EV +H +
Sbjct: 580 LGLAAAG--AYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEVPNHTND 625


>sp|O80977|VSR3_ARATH Vacuolar-sorting receptor 3 OS=Arabidopsis
thaliana GN=VSR3 PE=2 SV=1
Length = 628

Score = 65.5 bits (158), Expect = 1e-10
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = -3

Query: 502 VGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
+GL AAG AY+VYKY LR YMDSE++AIMAQYMPL+SQ E+ +H +
Sbjct: 580 LGLAAAG--AYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEIPNHVND 625


>sp|O22925|VSR2_ARATH Vacuolar-sorting receptor 2 OS=Arabidopsis
thaliana GN=VSR2 PE=2 SV=1
Length = 625

Score = 60.8 bits (146), Expect = 3e-09
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLES 389
++GL AA +GAY VYKY +R YMDSE++AIMAQYMPL++
Sbjct: 575 IMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDN 613


>sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1 OS=Pisum sativum
GN=BP80 PE=1 SV=1
Length = 623

Score = 59.3 bits (142), Expect = 1e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
L+ L G ++VYKY +R YMDSE++AIMAQYMPL+SQ+E +H
Sbjct: 572 LIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQEEGPNH 617


>sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis
thaliana GN=VSR1 PE=1 SV=2
Length = 623

Score = 59.3 bits (142), Expect = 1e-08
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQ 386
++G+ AG+ Y VYKY +R+YMD+E++ IMAQYMPLESQ
Sbjct: 573 IIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQ 612


>sp|Q9FYH7|VSR6_ARATH Vacuolar-sorting receptor 6 OS=Arabidopsis
thaliana GN=VSR6 PE=2 SV=2
Length = 622

Score = 56.6 bits (135), Expect = 6e-08
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQD 383
L + + +G YV YKY LR+YMDSE+ AIM+QYMPLESQ+
Sbjct: 562 LAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQN 602


>sp|Q8L7E3|VSR7_ARATH Vacuolar-sorting receptor 7 OS=Arabidopsis
thaliana GN=VSR7 PE=2 SV=2
Length = 625

Score = 53.5 bits (127), Expect = 5e-07
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = -3

Query: 496 LCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQ 386
+ AG+ Y+ YKY R+YMDSE+ IM+QYMPLESQ
Sbjct: 575 VAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQ 611


>sp|O64758|VSR5_ARATH Vacuolar-sorting receptor 5 OS=Arabidopsis
thaliana GN=VSR5 PE=2 SV=1
Length = 618

Score = 52.4 bits (124), Expect = 1e-06
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQ 386
L + +GAY+ YKY L++YMDSE+ +IM+QY+PL+SQ
Sbjct: 571 LTAIAGISLGAYIFYKYHLQSYMDSEIVSIMSQYIPLDSQ 610


>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11
OS=Homo sapiens GN=DDX11 PE=2 SV=1
Length = 970

Score = 30.4 bits (67), Expect = 5.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Frame = +1

Query: 184 KAENVEPYPCVGKS--WAKHCPCRRISDAIV---------NAMTHSLALSC 303
+A ++P PC G+S W +HC C +S V A +L LSC
Sbjct: 871 QAAGLDPSPCGGQSYLWPRHCCCAEVSPGEVGLFLMGNHTTAWRRALPLSC 921


>sp|A6L9D2|OXAA_PARD8 Inner membrane protein oxaA OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=oxaA PE=3 SV=1
Length = 633

Score = 29.6 bits (65), Expect = 8.4
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -2

Query: 278 MAFTIASDILRQGQCFAHDFPTHGYGSTFSAFITLT--YAGKEHICFLCLILEIIDLYTI 105
M F A ++ Q +AHD T+ +++ +I + Y G HI CL++ I +++
Sbjct: 467 MFFPSAIELRHQSFLWAHDLSTYDAIFSWNKYIPIITPYFGN-HISLFCLLMTITNIFYT 525

Query: 104 MLPSEYSSTEMENLALMSL*NYQL 33
E ++T + + M Y +
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMM 549


tr_hit_id B8LPV3
Definition tr|B8LPV3|B8LPV3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 46
Score (bit) 76.6
E-value 6.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917365|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_H11.
(507 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LPV3|B8LPV3_PICSI Putative uncharacterized protein OS=Picea... 77 6e-13
tr|A9U2S8|A9U2S8_PHYPA Predicted protein OS=Physcomitrella paten... 75 2e-12
tr|A7QL63|A7QL63_VITVI Chromosome chr3 scaffold_117, whole genom... 74 3e-12
tr|Q9SDR8|Q9SDR8_PRUDU Vacuolar sorting receptor protein (Fragme... 72 1e-11
tr|A9RCZ4|A9RCZ4_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11
tr|A7QFP2|A7QFP2_VITVI Chromosome chr8 scaffold_88, whole genome... 71 3e-11
tr|A5C8C9|A5C8C9_VITVI Putative uncharacterized protein OS=Vitis... 71 3e-11
tr|A9TGU2|A9TGU2_PHYPA Predicted protein OS=Physcomitrella paten... 70 8e-11
tr|Q7XHX6|Q7XHX6_ORYSJ Os07g0680000 protein OS=Oryza sativa subs... 69 1e-10
tr|B8B629|B8B629_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10
tr|A9S0J9|A9S0J9_PHYPA Predicted protein OS=Physcomitrella paten... 69 1e-10
tr|Q10LT8|Q10LT8_ORYSJ Os03g0335300 protein OS=Oryza sativa subs... 69 2e-10
tr|B8ANZ8|B8ANZ8_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10
tr|A3AHP2|A3AHP2_ORYSJ Putative uncharacterized protein OS=Oryza... 69 2e-10
tr|Q9AWB4|Q9AWB4_PHYPA EGF receptor-like protein (Fragment) OS=P... 68 3e-10
tr|A9TBT9|A9TBT9_PHYPA Predicted protein OS=Physcomitrella paten... 68 3e-10
tr|B6U0J6|B6U0J6_MAIZE Putative uncharacterized protein OS=Zea m... 67 4e-10
tr|Q94HD5|Q94HD5_ORYSA Putative vacuolar sorting receptor protei... 67 6e-10
tr|Q8H8K1|Q8H8K1_ORYSJ Putative vacuolar sorting receptor protei... 67 6e-10
tr|Q339K4|Q339K4_ORYSJ Os10g0346600 protein OS=Oryza sativa subs... 67 6e-10
tr|A2Z686|A2Z686_ORYSI Putative uncharacterized protein OS=Oryza... 67 6e-10
tr|Q9LLR3|Q9LLR3_WHEAT Vacuolar targeting receptor bp-80 OS=Trit... 66 1e-09
tr|P93027|P93027_ARATH Vacuolar sorting receptor homolog OS=Arab... 66 1e-09
tr|P93645|P93645_MAIZE Vacuolar sorting receptor homolog (Fragme... 65 1e-09
tr|B6U4K3|B6U4K3_MAIZE Vacuolar sorting receptor 3 OS=Zea mays P... 65 1e-09
tr|B4FAD8|B4FAD8_MAIZE Putative uncharacterized protein OS=Zea m... 65 1e-09
tr|A9S0L8|A9S0L8_PHYPA Predicted protein OS=Physcomitrella paten... 65 1e-09
tr|Q2QYK3|Q2QYK3_ORYSJ Os12g0116000 protein OS=Oryza sativa subs... 65 2e-09
tr|B8BNX3|B8BNX3_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|B8BIR1|B8BIR1_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09

>tr|B8LPV3|B8LPV3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 635

Score = 76.6 bits (187), Expect = 6e-13
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
L+GL AAG+GAYVVYKY LR+YMDSE++AIMAQYMPL+SQ E+ +H
Sbjct: 584 LLGLAAAGVGAYVVYKYRLRSYMDSEIRAIMAQYMPLDSQGEIPNH 629


>tr|A9U2S8|A9U2S8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_100917 PE=4 SV=1
Length = 620

Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEEGGR 350
L GL G+G+YVVYKY LR YMDSE++AIMAQYMPL+SQ EV +H+ G R
Sbjct: 567 LAGLSVLGLGSYVVYKYRLRTYMDSEIRAIMAQYMPLDSQGEVQNHSHNGVR 618


>tr|A7QL63|A7QL63_VITVI Chromosome chr3 scaffold_117, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001461001
PE=4 SV=1
Length = 631

Score = 74.3 bits (181), Expect = 3e-12
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
L+GL AG GAY+VYKY +R+YMDSE++AIMAQYMPL+SQ EV +H E
Sbjct: 580 LIGLAMAGTGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQTEVPNHVSE 628


>tr|Q9SDR8|Q9SDR8_PRUDU Vacuolar sorting receptor protein (Fragment)
OS=Prunus dulcis PE=2 SV=1
Length = 159

Score = 72.4 bits (176), Expect = 1e-11
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
L+GL AG GAY+VYKY LR+YMDSE++AIMAQYMPL+SQ EV +H +
Sbjct: 108 LIGLAMAGGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQAEVPNHVND 156


>tr|A9RCZ4|A9RCZ4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_111533 PE=4 SV=1
Length = 636

Score = 72.0 bits (175), Expect = 2e-11
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
L G+ G+G+YVVYKY LR YMDSE++AIMAQYMPL+SQ E+ +H+ +
Sbjct: 585 LAGISVLGLGSYVVYKYRLRTYMDSEIRAIMAQYMPLDSQSEIQNHSRD 633


>tr|A7QFP2|A7QFP2_VITVI Chromosome chr8 scaffold_88, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037498001
PE=4 SV=1
Length = 624

Score = 70.9 bits (172), Expect = 3e-11
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEEG 356
++GL AAG+G Y +YKY +R YMDSE++AIMAQYMPL++Q E+ +H G
Sbjct: 573 ILGLAAAGVGGYALYKYRIRRYMDSEIRAIMAQYMPLDNQGEIPNHVPHG 622


>tr|A5C8C9|A5C8C9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015390 PE=4 SV=1
Length = 625

Score = 70.9 bits (172), Expect = 3e-11
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = -3

Query: 505 LVGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEEG 356
++GL AAG+G Y +YKY +R YMDSE++AIMAQYMPL++Q E+ +H G
Sbjct: 574 ILGLAAAGVGGYALYKYRIRRYMDSEIRAIMAQYMPLDNQGEIPNHVPHG 623


>tr|A9TGU2|A9TGU2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_145371 PE=4 SV=1
Length = 626

Score = 69.7 bits (169), Expect = 8e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -3

Query: 502 VGLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHHAEE 359
+G+ + G+ YVVYKY LR+YMDSE++AIMAQYMPL+S EV+HH E
Sbjct: 577 LGVASLGVVGYVVYKYRLRSYMDSEIRAIMAQYMPLDSSSEVNHHLTE 624


>tr|Q7XHX6|Q7XHX6_ORYSJ Os07g0680000 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0008J01.6 PE=2 SV=1
Length = 626

Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -3

Query: 499 GLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
GL AGIGAY VYKY LR+YMDSE++AIMAQYMPLE+Q+ + H
Sbjct: 575 GLALAGIGAYAVYKYRLRSYMDSEIRAIMAQYMPLENQETPNQH 618


>tr|B8B629|B8B629_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_27347 PE=4 SV=1
Length = 626

Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -3

Query: 499 GLCAAGIGAYVVYKYXLRAYMDSEVKAIMAQYMPLESQDEVHHH 368
GL AGIGAY VYKY LR+YMDSE++AIMAQYMPLE+Q+ + H
Sbjct: 575 GLALAGIGAYAVYKYRLRSYMDSEIRAIMAQYMPLENQETPNQH 618